- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-113 | Anolis carolinensis | mdo-miR-193 | 21/21 | scaffold_174 | + | 51-71 | 951280-951361 | 0.999037 | Ortholog | 19/36 | 1/55 |
2 | anoCar1-113 | Anolis carolinensis | mmu-miR-193 | 22/22 | scaffold_174 | + | 51-72 | 951280-951361 | 0.999599 | Ortholog | 19/36 | 1/55 |
3 | apiMel2-9 | Apis mellifera | dme-miR-193 | 20/22 | Group1 | - | 50-70 | 1144583-1144662 | 0.994265 | Ortholog | 19/36 | 1/55 |
4 | bta-mir-193a | Bos taurus | bta-miR-193a* | 22/22 | chr19 | - | 15-36 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
5 | bta-mir-193a | Bos taurus | bta-miR-193a | 22/22 | chr19 | - | 49-70 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
6 | bta-mir-193b | Bos taurus | bta-miR-193b | 24/24 | chr25 | + | 51-74 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
7 | bfl-mir-193 | Branchiostoma floridae | bfl-miR-193 | 24/24 | Bf_V2_23 | - | 48-71 | N/A | - | miRBase_13_0 | 19/36 | 1/55 |
8 | calJac1-33 | Callithrix jacchus | cfa-miR-193b | 22/22 | Contig1112 | + | 14-35 | 384363-384445 | 0.996515 | Ortholog | 19/36 | 2/55 |
9 | calJac1-541 | Callithrix jacchus | mmu-miR-193* | 21/22 | Contig537 | + | 15-36 | 424688-424769 | 0.99834 | Ortholog | 19/36 | 2/55 |
10 | calJac1-541 | Callithrix jacchus | mdo-miR-193 | 21/21 | Contig537 | + | 49-69 | 424688-424769 | 0.999607 | Ortholog | 19/36 | 2/55 |
11 | calJac1-541 | Callithrix jacchus | mmu-miR-193 | 22/22 | Contig537 | + | 49-70 | 424688-424769 | 0.999837 | Ortholog | 19/36 | 2/55 |
12 | cfa-mir-193a | Canis familiaris | cfa-miR-193a | 22/22 | chr9 | - | 1-22 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
13 | cfa-mir-193b | Canis familiaris | cfa-miR-193b | 22/22 | chr6 | - | 1-22 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
14 | cap-mir-193 | Capitella sp. | cap-miR-193 | 22/22 | scaffold_127 | - | 52-73 | N/A | - | miRBase_13_0 | 19/36 | 1/55 |
15 | cavPor3-468 | Cavia porcellus | mmu-miR-193* | 21/22 | scaffold_32 | - | 18-39 | 15064343-15064431 | 0.999269 | Ortholog | 19/36 | 2/55 |
16 | cavPor3-468 | Cavia porcellus | mmu-miR-193 | 22/22 | scaffold_32 | - | 49-70 | 15064346-15064428 | 0.999919 | Ortholog | 19/36 | 2/55 |
17 | cavPor3-468 | Cavia porcellus | mdo-miR-193 | 21/21 | scaffold_32 | - | 49-69 | 15064346-15064428 | 0.999816 | Ortholog | 19/36 | 2/55 |
18 | cavPor3-520 | Cavia porcellus | gga-miR-193b | 24/24 | scaffold_4 | + | 50-73 | 33124932-33125012 | 0.9909 | Ortholog | 19/36 | 2/55 |
19 | cavPor3-520 | Cavia porcellus | xtr-miR-193 | 22/24 | scaffold_4 | + | 50-72 | 33124932-33125012 | 0.987611 | Ortholog | 19/36 | 2/55 |
20 | cavPor3-520 | Cavia porcellus | cfa-miR-193b | 22/22 | scaffold_4 | + | 14-35 | 33124931-33125013 | 0.990065 | Ortholog | 19/36 | 2/55 |
21 | cavPor3-520 | Cavia porcellus | mmu-miR-193b | 22/22 | scaffold_4 | + | 51-72 | 33124931-33125013 | 0.969959 | Ortholog | 19/36 | 2/55 |
22 | danRer5-284 | Danio rerio | mdo-miR-193 | 21/21 | chr6 | - | 50-70 | 42694334-42694416 | 0.992269 | Paralog | 19/36 | 5/55 |
23 | danRer5-284 | Danio rerio | dre-miR-193a | 22/22 | chr6 | - | 49-70 | 42694335-42694415 | 0.996065 | Paralog | 19/36 | 5/55 |
24 | dre-mir-193a-1 | Danio rerio | dre-miR-193a | 22/22 | chr3 | + | 61-82 | N/A | - | miRBase_13_0 | 19/36 | 5/55 |
25 | dre-mir-193a-2 | Danio rerio | dre-miR-193a | 22/22 | Zv7_scaffold2612 | + | 55-76 | N/A | - | miRBase_13_0 | 19/36 | 5/55 |
26 | dre-mir-193a-3 | Danio rerio | dre-miR-193a | 22/22 | N/A | N/A | 55-76 | N/A | - | miRBase_13_0 | 19/36 | 5/55 |
27 | dre-mir-193b | Danio rerio | dre-miR-193b | 22/22 | chr3 | + | 52-73 | N/A | - | miRBase_13_0 | 19/36 | 5/55 |
28 | dasNov1-306 | Dasypus novemcinctus | mmu-miR-193b | 22/22 | scaffold_57617 | + | 51-72 | N/A | 0.97307 | Ortholog | 19/36 | 1/55 |
29 | dasNov1-306 | Dasypus novemcinctus | xtr-miR-193 | 22/24 | scaffold_57617 | + | 50-72 | N/A | 0.979315 | Ortholog | 19/36 | 1/55 |
30 | dasNov1-306 | Dasypus novemcinctus | gga-miR-193b | 24/24 | scaffold_57617 | + | 50-73 | N/A | 0.985747 | Ortholog | 19/36 | 1/55 |
31 | dme-mir-193 | Drosophila melanogaster | dme-miR-193 | 22/22 | chr3L | + | 73-94 | N/A | - | miRBase_13_0 | 19/36 | 1/55 |
32 | echTel1-338 | Echinops telfari | mmu-miR-193 | 22/22 | scaffold_315576 | + | 51-72 | N/A | 0.999915 | Ortholog | 19/36 | 1/55 |
33 | echTel1-338 | Echinops telfari | mdo-miR-193 | 21/21 | scaffold_315576 | + | 51-71 | N/A | 0.999812 | Ortholog | 19/36 | 1/55 |
34 | echTel1-338 | Echinops telfari | mmu-miR-193* | 21/22 | scaffold_315576 | + | 15-36 | N/A | 0.999293 | Ortholog | 19/36 | 1/55 |
35 | equCab1-102 | Equus caballus | cfa-miR-193b | 22/22 | chr13 | - | 14-35 | 12940488-12940570 | 0.988936 | Ortholog | 19/36 | 1/55 |
36 | equCab1-102 | Equus caballus | mmu-miR-193b | 22/22 | chr13 | - | 49-70 | 12940488-12940568 | 0.931208 | Ortholog | 19/36 | 1/55 |
37 | equCab1-102 | Equus caballus | xtr-miR-193 | 22/24 | chr13 | - | 50-72 | 12940488-12940568 | 0.990185 | Ortholog | 19/36 | 1/55 |
38 | equCab1-102 | Equus caballus | gga-miR-193b | 24/24 | chr13 | - | 48-71 | 12940491-12940567 | 0.991673 | Ortholog | 19/36 | 1/55 |
39 | felCat3-137 | Felis catus | mdo-miR-193 | 21/21 | scaffold_151494 | + | 50-70 | 3051-3133 | 0.999881 | Ortholog | 19/36 | 2/55 |
40 | felCat3-137 | Felis catus | mmu-miR-193* | 21/22 | scaffold_151494 | + | 17-38 | 3050-3135 | 0.999269 | Ortholog | 19/36 | 2/55 |
41 | felCat3-137 | Felis catus | mmu-miR-193 | 22/22 | scaffold_151494 | + | 50-71 | 3051-3133 | 0.999758 | Ortholog | 19/36 | 2/55 |
42 | felCat3-413 | Felis catus | cfa-miR-193b | 22/22 | scaffold_3358 | + | 14-35 | 474-556 | 0.987624 | Ortholog | 19/36 | 2/55 |
43 | fru-mir-193 | Fugu rubripes | fru-miR-193 | 22/22 | scaffold_26 | - | 50-71 | N/A | - | miRBase_13_0 | 19/36 | 1/55 |
44 | gga-mir-193a | Gallus gallus | gga-miR-193a | 22/22 | chr18 | + | 48-69 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
45 | gga-mir-193b | Gallus gallus | gga-miR-193b | 24/24 | chr14 | + | 51-74 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
46 | gasAcu1-216 | Gasterosteus aculeatus | mmu-miR-193 | 22/22 | chrIX | + | 51-72 | 17406739-17406823 | 0.999325 | Ortholog | 19/36 | 1/55 |
47 | gasAcu1-216 | Gasterosteus aculeatus | mmu-miR-193* | 21/22 | chrIX | + | 14-35 | 17406739-17406821 | 0.982077 | Ortholog | 19/36 | 1/55 |
48 | gasAcu1-216 | Gasterosteus aculeatus | mdo-miR-193 | 21/21 | chrIX | + | 51-71 | 17406739-17406823 | 0.998506 | Ortholog | 19/36 | 1/55 |
49 | hsa-mir-193a | Homo sapiens | hsa-miR-193a-3p | 22/22 | chr17 | + | 55-76 | 26911128-26911215 | - | miRBase_13_0 | 19/36 | 2/55 |
50 | hsa-mir-193a | Homo sapiens | hsa-miR-193a-5p | 22/22 | chr17 | + | 21-42 | 26911128-26911215 | - | miRBase_13_0 | 19/36 | 2/55 |
51 | hsa-mir-193b | Homo sapiens | hsa-miR-193b | 22/22 | chr16 | + | 51-72 | 14305325-14305407 | - | miRBase_13_0 | 19/36 | 2/55 |
52 | hsa-mir-193b | Homo sapiens | hsa-miR-193b* | 22/22 | chr16 | + | 14-35 | 14305325-14305407 | - | miRBase_13_0 | 19/36 | 2/55 |
53 | lgi-mir-193 | Lottia gigantea | lgi-miR-193 | 22/22 | sca_31 | + | 54-75 | N/A | - | miRBase_13_0 | 19/36 | 1/55 |
54 | loxAfr1-371 | Loxodonta africana | mmu-miR-193* | 21/22 | scaffold_70108 | + | 16-37 | N/A | 0.999066 | Ortholog | 19/36 | 1/55 |
55 | mml-mir-193a | Macaca mulatta | mml-miR-193a-5p | 22/22 | chr16 | + | 18-39 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
56 | mml-mir-193a | Macaca mulatta | mml-miR-193a-3p | 22/22 | chr16 | + | 52-73 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
57 | mml-mir-193b | Macaca mulatta | mml-miR-193b | 22/22 | chr20 | + | 51-72 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
58 | mdo-mir-193 | Monodelphis domestica | mdo-miR-193 | 21/21 | chr2 | - | 41-61 | N/A | - | miRBase_13_0 | 19/36 | 3/55 |
59 | monDom4-203 | Monodelphis domestica | hsa-miR-193a-5p | 21/22 | chr2 | - | 15-36 | 504311637-504311718 | 0.999249 | Paralog | 19/36 | 3/55 |
60 | monDom4-203 | Monodelphis domestica | mmu-miR-193 | 22/22 | chr2 | - | 48-69 | 504311636-504311717 | 0.999854 | Paralog | 19/36 | 3/55 |
61 | monDom4-203 | Monodelphis domestica | mdo-miR-193 | 21/21 | chr2 | - | 49-69 | 504311637-504311718 | 0.99993 | Paralog | 19/36 | 3/55 |
62 | monDom4-369 | Monodelphis domestica | mmu-miR-193b | 22/22 | chr6 | + | 51-72 | 108685040-108685123 | 0.903387 | Paralog | 19/36 | 3/55 |
63 | monDom4-369 | Monodelphis domestica | gga-miR-193b | 24/24 | chr6 | + | 50-73 | 108685041-108685122 | 0.96096 | Paralog | 19/36 | 3/55 |
64 | monDom4-369 | Monodelphis domestica | xtr-miR-193 | 22/24 | chr6 | + | 50-72 | 108685041-108685122 | 0.956335 | Paralog | 19/36 | 3/55 |
65 | mmu-mir-193 | Mus musculus | mmu-miR-193* | 22/22 | chr11 | + | 7-28 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
66 | mmu-mir-193 | Mus musculus | mmu-miR-193 | 22/22 | chr11 | + | 41-62 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
67 | mmu-mir-193b | Mus musculus | mmu-miR-193b | 22/22 | chr16 | + | 48-69 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
68 | oan-mir-193 | Ornithorhynchus anatinus | oan-miR-193 | 22/22 | chr2 | + | 55-76 | N/A | - | miRBase_13_0 | 19/36 | 1/55 |
69 | oan-mir-193 | Ornithorhynchus anatinus | oan-miR-193* | 22/22 | chr2 | + | 18-39 | N/A | - | miRBase_13_0 | 19/36 | 1/55 |
70 | oryCun1-506 | Oryctolagus cuniculus | mmu-miR-193b | 22/22 | scaffold_214921 | + | 51-72 | N/A | 0.969959 | Ortholog | 19/36 | 1/55 |
71 | oryCun1-506 | Oryctolagus cuniculus | gga-miR-193b | 24/24 | scaffold_214921 | + | 50-73 | N/A | 0.9909 | Ortholog | 19/36 | 1/55 |
72 | oryCun1-506 | Oryctolagus cuniculus | xtr-miR-193 | 22/24 | scaffold_214921 | + | 50-72 | N/A | 0.987611 | Ortholog | 19/36 | 1/55 |
73 | oryLat2-5 | Oryzias latipes | mdo-miR-193 | 21/21 | chr1 | + | 51-71 | 11805725-11805805 | 0.996279 | Ortholog | 19/36 | 1/55 |
74 | oryLat2-5 | Oryzias latipes | mmu-miR-193* | 21/22 | chr1 | + | 16-37 | 11805723-11805807 | 0.97824 | Ortholog | 19/36 | 1/55 |
75 | oryLat2-5 | Oryzias latipes | mmu-miR-193 | 22/22 | chr1 | + | 51-72 | 11805725-11805805 | 0.998382 | Ortholog | 19/36 | 1/55 |
76 | otoGar1-278 | Otolemur garnettii | mdo-miR-193 | 21/21 | scaffold_16559.1-17928 | - | 48-68 | N/A | 0.999804 | Ortholog | 19/36 | 1/55 |
77 | otoGar1-278 | Otolemur garnettii | mmu-miR-193* | 21/22 | scaffold_16559.1-17928 | - | 21-42 | N/A | 0.999142 | Ortholog | 19/36 | 1/55 |
78 | otoGar1-278 | Otolemur garnettii | mmu-miR-193 | 22/22 | scaffold_16559.1-17928 | - | 48-69 | N/A | 0.999914 | Ortholog | 19/36 | 1/55 |
79 | ptr-mir-193a | Pan troglodytes | ptr-miR-193a | 22/22 | chr17 | - | 55-76 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
80 | ptr-mir-193b | Pan troglodytes | ptr-miR-193b | 22/22 | chr16 | + | 50-71 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
81 | ponAbe2-272 | Pongo abelii | hsa-miR-193b | 22/22 | chr16 | + | 51-72 | 14771132-14771214 | 0.993825 | Ortholog | 19/36 | 2/55 |
82 | ponAbe2-272 | Pongo abelii | xtr-miR-193 | 22/24 | chr16 | + | 50-72 | 14771133-14771213 | 0.997302 | Ortholog | 19/36 | 2/55 |
83 | ponAbe2-285 | Pongo abelii | mmu-miR-193* | 21/22 | chr17 | + | 15-36 | 26401703-26401784 | 0.998984 | Ortholog | 19/36 | 2/55 |
84 | ponAbe2-285 | Pongo abelii | mmu-miR-193 | 22/22 | chr17 | + | 49-70 | 26401703-26401784 | 0.99993 | Ortholog | 19/36 | 2/55 |
85 | ponAbe2-285 | Pongo abelii | mdo-miR-193 | 21/21 | chr17 | + | 49-69 | 26401703-26401784 | 0.999842 | Ortholog | 19/36 | 2/55 |
86 | rno-mir-193 | Rattus norvegicus | rno-miR-193 | 22/22 | chr10 | + | 54-75 | N/A | - | miRBase_13_0 | 19/36 | 1/55 |
87 | rno-mir-193 | Rattus norvegicus | rno-miR-193* | 22/22 | chr10 | + | 20-41 | N/A | - | miRBase_13_0 | 19/36 | 1/55 |
88 | sko-mir-193 | Saccoglossus kowalevskii | sko-miR-193 | 22/22 | N/A | N/A | 43-64 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
89 | sko-mir-193b | Saccoglossus kowalevskii | sko-miR-193b | 22/22 | N/A | N/A | 50-71 | N/A | - | miRBase_13_0 | 19/36 | 2/55 |
90 | sorAra1-4 | Sorex araneus | xtr-miR-193 | 22/24 | scaffold_124470 | - | 49-71 | N/A | 0.990046 | Ortholog | 19/36 | 1/55 |
91 | sorAra1-4 | Sorex araneus | gga-miR-193b | 24/24 | scaffold_124470 | - | 48-71 | N/A | 0.99575 | Ortholog | 19/36 | 1/55 |
92 | sorAra1-4 | Sorex araneus | mmu-miR-193b | 22/22 | scaffold_124470 | - | 49-70 | N/A | 0.977267 | Ortholog | 19/36 | 1/55 |
93 | taeGut1-103 | Taeniopygia guttata | mmu-miR-193* | 21/22 | chr18 | + | 3-24 | 11017822-11017882 | 0.99858 | Ortholog | 19/36 | 2/55 |
94 | taeGut1-74 | Taeniopygia guttata | gga-miR-193b | 24/24 | chr14 | - | 48-71 | 6793220-6793297 | 0.990547 | Ortholog | 19/36 | 2/55 |
95 | taeGut1-74 | Taeniopygia guttata | xtr-miR-193 | 22/24 | chr14 | - | 49-71 | 6793219-6793298 | 0.969377 | Ortholog | 19/36 | 2/55 |
96 | taeGut1-74 | Taeniopygia guttata | mmu-miR-193b | 22/22 | chr14 | - | 49-70 | 6793219-6793298 | 0.939106 | Ortholog | 19/36 | 2/55 |
97 | tni-mir-193 | Tetraodon nigroviridis | tni-miR-193 | 22/22 | chrUn_random | - | 45-66 | N/A | - | miRBase_13_0 | 19/36 | 1/55 |
98 | tupBel1-573 | Tupaia belangeri | mmu-miR-193b | 22/22 | scaffold_143264.1-132639 | - | 49-70 | N/A | 0.98288 | Ortholog | 19/36 | 1/55 |
99 | tupBel1-573 | Tupaia belangeri | xtr-miR-193 | 22/24 | scaffold_143264.1-132639 | - | 49-71 | N/A | 0.992426 | Ortholog | 19/36 | 1/55 |
100 | tupBel1-573 | Tupaia belangeri | gga-miR-193b | 24/24 | scaffold_143264.1-132639 | - | 48-71 | N/A | 0.995543 | Ortholog | 19/36 | 1/55 |
101 | xtr-mir-193 | Xenopus tropicalis | xtr-miR-193 | 24/24 | scaffold_152 | + | 51-74 | N/A | - | miRBase_13_0 | 19/36 | 1/55 |
Total | 101 record(s). |