- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | age-mir-194 | Ateles geoffroyi | age-miR-194 | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 1/47 |
2 | bosTau4-169 | Bos taurus | bta-miR-194 | 22/22 | chrUn.004.2 | + | 13-34 | 1796079-1796159 | 0.99985 | Paralog | 17/29 | 2/47 |
3 | bosTau4-169 | Bos taurus | dre-miR-194a | 21/21 | chrUn.004.2 | + | 13-33 | 1796079-1796159 | 0.9998 | Paralog | 17/29 | 2/47 |
4 | bta-mir-194 | Bos taurus | bta-miR-194 | 22/22 | chr29 | - | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
5 | calJac1-502 | Callithrix jacchus | oan-miR-194* | 20/22 | Contig4900 | - | 50-70 | 84768-84849 | 0.997754 | Ortholog | 17/29 | 2/47 |
6 | calJac1-502 | Callithrix jacchus | hsa-miR-194* | 22/22 | Contig4900 | - | 49-70 | 84769-84848 | 0.996385 | Ortholog | 17/29 | 2/47 |
7 | calJac1-588 | Callithrix jacchus | mmu-miR-194 | 22/22 | Contig6805 | + | 14-35 | 82216-82298 | 0.995687 | Ortholog | 17/29 | 2/47 |
8 | calJac1-588 | Callithrix jacchus | dre-miR-194a | 21/21 | Contig6805 | + | 14-34 | 82216-82298 | 0.993762 | Ortholog | 17/29 | 2/47 |
9 | canFam2-95 | Canis familiaris | cfa-miR-194 | 22/22 | chr18 | + | 14-35 | 55305582-55305663 | 0.999953 | Paralog | 17/29 | 2/47 |
10 | canFam2-95 | Canis familiaris | dre-miR-194a | 21/21 | chr18 | + | 14-34 | 55305582-55305663 | 0.999942 | Paralog | 17/29 | 2/47 |
11 | canFam2-95 | Canis familiaris | hsa-miR-194* | 20/22 | chr18 | + | 52-71 | 55305580-55305665 | 0.998712 | Paralog | 17/29 | 2/47 |
12 | cfa-mir-194 | Canis familiaris | cfa-miR-194 | 22/22 | chr38 | - | 1-22 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
13 | cavPor3-564 | Cavia porcellus | dre-miR-194a | 21/21 | scaffold_42 | - | 15-35 | 5717410-5717493 | 0.999977 | Ortholog | 17/29 | 2/47 |
14 | cavPor3-564 | Cavia porcellus | hsa-miR-194* | 22/22 | scaffold_42 | - | 49-70 | 5717412-5717491 | 0.999305 | Ortholog | 17/29 | 2/47 |
15 | cavPor3-564 | Cavia porcellus | mmu-miR-194 | 22/22 | scaffold_42 | - | 20-41 | 5717408-5717498 | 0.999983 | Ortholog | 17/29 | 2/47 |
16 | cavPor3-564 | Cavia porcellus | oan-miR-194* | 20/22 | scaffold_42 | - | 50-70 | 5717404-5717492 | 0.999892 | Ortholog | 17/29 | 2/47 |
17 | cavPor3-781 | Cavia porcellus | hsa-miR-194* | 20/22 | scaffold_90 | + | 21-42 | 3646719-3646806 | 0.902057 | Ortholog | 17/29 | 2/47 |
18 | dre-mir-194a | Danio rerio | dre-miR-194a | 21/21 | chr10 | + | 15-35 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
19 | dre-mir-194b | Danio rerio | dre-miR-194b | 22/22 | chr14 | - | 11-32 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
20 | dasNov1-380 | Dasypus novemcinctus | hsa-miR-194* | 20/22 | scaffold_96787 | + | 52-71 | N/A | 0.999355 | Ortholog | 17/29 | 1/47 |
21 | echTel1-183 | Echinops telfari | mmu-miR-194 | 22/22 | scaffold_286232 | + | 15-36 | N/A | 0.999796 | Ortholog | 17/29 | 2/47 |
22 | echTel1-183 | Echinops telfari | dre-miR-194a | 21/21 | scaffold_286232 | + | 15-35 | N/A | 0.999692 | Ortholog | 17/29 | 2/47 |
23 | echTel1-262 | Echinops telfari | mmu-miR-194 | 22/22 | scaffold_303694 | - | 19-40 | N/A | 0.999979 | Ortholog | 17/29 | 2/47 |
24 | echTel1-262 | Echinops telfari | dre-miR-194a | 21/21 | scaffold_303694 | - | 18-38 | N/A | 0.999964 | Ortholog | 17/29 | 2/47 |
25 | equCab1-452 | Equus caballus | mmu-miR-194 | 22/22 | chr30 | - | 11-32 | 506135-506213 | 0.999265 | Ortholog | 17/29 | 2/47 |
26 | equCab1-452 | Equus caballus | dre-miR-194a | 21/21 | chr30 | - | 11-31 | 506135-506213 | 0.999037 | Ortholog | 17/29 | 2/47 |
27 | equCab1-97 | Equus caballus | hsa-miR-194* | 22/22 | chr12 | - | 49-70 | 15418366-15418445 | 0.999338 | Ortholog | 17/29 | 2/47 |
28 | felCat3-351 | Felis catus | mmu-miR-194 | 22/22 | scaffold_212046 | - | 10-31 | 161601-161679 | 0.998939 | Ortholog | 17/29 | 1/47 |
29 | felCat3-351 | Felis catus | dre-miR-194a | 21/21 | scaffold_212046 | - | 11-31 | 161602-161680 | 0.999704 | Ortholog | 17/29 | 1/47 |
30 | fru-mir-194 | Fugu rubripes | fru-miR-194 | 21/21 | scaffold_242 | - | 8-28 | N/A | - | miRBase_13_0 | 17/29 | 1/47 |
31 | gga-mir-194 | Gallus gallus | gga-miR-194 | 22/22 | chr3 | + | 14-35 | N/A | - | miRBase_13_0 | 17/29 | 1/47 |
32 | gasAcu1-107 | Gasterosteus aculeatus | oan-miR-194* | 21/22 | chrIV | + | 51-71 | 8232579-8232665 | 0.99936 | Ortholog | 17/29 | 2/47 |
33 | gasAcu1-107 | Gasterosteus aculeatus | hsa-miR-194* | 21/22 | chrIV | + | 51-72 | 8232579-8232665 | 0.998808 | Ortholog | 17/29 | 2/47 |
34 | gasAcu1-355 | Gasterosteus aculeatus | mmu-miR-194 | 22/22 | chrVII | - | 16-37 | 15576872-15576955 | 0.99984 | Ortholog | 17/29 | 2/47 |
35 | gasAcu1-355 | Gasterosteus aculeatus | dre-miR-194a | 21/21 | chrVII | - | 16-36 | 15576872-15576955 | 0.999777 | Ortholog | 17/29 | 2/47 |
36 | ggo-mir-194 | Gorilla gorilla | ggo-miR-194 | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 1/47 |
37 | hsa-mir-194-1 | Homo sapiens | hsa-miR-194 | 22/22 | chr1 | - | 15-36 | 218358122-218358206 | - | miRBase_13_0 | 17/29 | 2/47 |
38 | hsa-mir-194-2 | Homo sapiens | hsa-miR-194* | 22/22 | chr11 | - | 51-72 | 64415403-64415487 | - | miRBase_13_0 | 17/29 | 2/47 |
39 | hsa-mir-194-2 | Homo sapiens | hsa-miR-194 | 22/22 | chr11 | - | 15-36 | 64415403-64415487 | - | miRBase_13_0 | 17/29 | 2/47 |
40 | loxAfr1-335 | Loxodonta africana | mmu-miR-194 | 22/22 | scaffold_641 | - | 16-37 | N/A | 0.999916 | Ortholog | 17/29 | 1/47 |
41 | loxAfr1-335 | Loxodonta africana | dre-miR-194a | 21/21 | scaffold_641 | - | 14-34 | N/A | 0.999846 | Ortholog | 17/29 | 1/47 |
42 | mml-mir-194-1 | Macaca mulatta | mml-miR-194 | 22/22 | chr1 | + | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
43 | mml-mir-194-2 | Macaca mulatta | mml-miR-194 | 22/22 | chr14 | + | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
44 | mne-mir-194 | Macaca nemestrina | mne-miR-194 | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 1/47 |
45 | mmu-mir-194-1 | Mus musculus | mmu-miR-194 | 22/22 | chr1 | + | 7-28 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
46 | mmu-mir-194-2 | Mus musculus | mmu-miR-194 | 22/22 | chr19 | + | 16-37 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
47 | oan-mir-194-1 | Ornithorhynchus anatinus | oan-miR-194 | 22/22 | Ultra67 | - | 22-43 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
48 | oan-mir-194-2 | Ornithorhynchus anatinus | oan-miR-194 | 22/22 | Contig35411 | - | 18-39 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
49 | oan-mir-194-2 | Ornithorhynchus anatinus | oan-miR-194* | 22/22 | Contig35411 | - | 54-75 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
50 | oryCun1-155 | Oryctolagus cuniculus | mmu-miR-194 | 22/22 | scaffold_175008 | + | 14-35 | N/A | 0.992558 | Ortholog | 17/29 | 2/47 |
51 | oryCun1-155 | Oryctolagus cuniculus | dre-miR-194a | 21/21 | scaffold_175008 | + | 14-34 | N/A | 0.989604 | Ortholog | 17/29 | 2/47 |
52 | oryCun1-457 | Oryctolagus cuniculus | hsa-miR-194* | 20/22 | scaffold_211916 | - | 36-56 | N/A | 0.969479 | Ortholog | 17/29 | 2/47 |
53 | oryLat2-105 | Oryzias latipes | dre-miR-194a | 21/21 | chr14 | + | 19-39 | 20215684-20215771 | 0.999692 | Ortholog | 17/29 | 2/47 |
54 | oryLat2-105 | Oryzias latipes | dre-miR-194b | 20/22 | chr14 | + | 19-40 | 20215684-20215771 | 0.999789 | Ortholog | 17/29 | 2/47 |
55 | oryLat2-27 | Oryzias latipes | dre-miR-194a | 19/21 | chr10 | + | 10-30 | 8219479-8219551 | 0.999707 | Ortholog | 17/29 | 2/47 |
56 | oryLat2-27 | Oryzias latipes | mmu-miR-194 | 20/22 | chr10 | + | 10-31 | 8219479-8219551 | 0.999643 | Ortholog | 17/29 | 2/47 |
57 | ptr-mir-194 | Pan troglodytes | ptr-miR-194 | 22/22 | chr1 | - | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 1/47 |
58 | ponAbe2-2 | Pongo abelii | dre-miR-194a | 21/21 | chr1 | + | 14-34 | 29611602-29611684 | 0.998645 | Ortholog | 17/29 | 1/47 |
59 | ponAbe2-2 | Pongo abelii | mmu-miR-194 | 22/22 | chr1 | + | 14-35 | 29611602-29611684 | 0.999167 | Ortholog | 17/29 | 1/47 |
60 | ppy-mir-194 | Pongo pygmaeus | ppy-miR-194 | 22/22 | N/A | N/A | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 1/47 |
61 | rno-mir-194-1 | Rattus norvegicus | rno-miR-194 | 22/22 | chr13 | + | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
62 | rno-mir-194-2 | Rattus norvegicus | rno-miR-194 | 22/22 | chr1 | + | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
63 | taeGut1-144 | Taeniopygia guttata | hsa-miR-194* | 20/22 | chr1_random | - | 24-45 | 141116-141209 | 0.949456 | Ortholog | 17/29 | 3/47 |
64 | taeGut1-231 | Taeniopygia guttata | mmu-miR-194 | 22/22 | chr3 | + | 14-35 | 9653583-9653664 | 0.998954 | Ortholog | 17/29 | 3/47 |
65 | taeGut1-231 | Taeniopygia guttata | dre-miR-194a | 21/21 | chr3 | + | 14-34 | 9653583-9653664 | 0.998825 | Ortholog | 17/29 | 3/47 |
66 | taeGut1-346 | Taeniopygia guttata | mmu-miR-194 | 22/22 | chrUn | + | 14-35 | 94526972-94527053 | 0.998954 | Ortholog | 17/29 | 3/47 |
67 | taeGut1-346 | Taeniopygia guttata | dre-miR-194a | 21/21 | chrUn | + | 14-34 | 94526972-94527053 | 0.998825 | Ortholog | 17/29 | 3/47 |
68 | tni-mir-194 | Tetraodon nigroviridis | tni-miR-194 | 21/21 | chr7 | + | 11-31 | N/A | - | miRBase_13_0 | 17/29 | 1/47 |
69 | xtr-mir-194-1 | Xenopus tropicalis | xtr-miR-194 | 22/22 | scaffold_182 | + | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
70 | xtr-mir-194-2 | Xenopus tropicalis | xtr-miR-194 | 22/22 | scaffold_296 | + | 15-36 | N/A | - | miRBase_13_0 | 17/29 | 2/47 |
Total | 70 record(s). |