- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | age-mir-196 | Ateles geoffroyi | age-miR-196 | 22/22 | N/A | N/A | 25-46 | N/A | - | miRBase_13_0 | 20/38 | 1/91 |
2 | bta-mir-196a-1 | Bos taurus | bta-miR-196a | 22/22 | chr19 | + | 24-45 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
3 | bta-mir-196a-2 | Bos taurus | bta-miR-196a | 22/22 | chr5 | - | 16-37 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
4 | bta-mir-196b | Bos taurus | bta-miR-196b | 23/23 | chr4 | + | 16-38 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
5 | cfa-mir-196a-1 | Canis familiaris | cfa-miR-196a | 22/22 | chr9 | - | 15-36 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
6 | cfa-mir-196a-2 | Canis familiaris | cfa-miR-196a | 22/22 | chr27 | - | 1-22 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
7 | cfa-mir-196b | Canis familiaris | cfa-miR-196b | 23/23 | chr14 | - | 1-23 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
8 | dre-mir-196a-1 | Danio rerio | dre-miR-196a | 22/22 | chr23 | - | 21-42 | N/A | - | miRBase_13_0 | 20/38 | 5/91 |
9 | dre-mir-196a-2 | Danio rerio | dre-miR-196a | 22/22 | chr19 | + | 11-32 | N/A | - | miRBase_13_0 | 20/38 | 5/91 |
10 | dre-mir-196b | Danio rerio | dre-miR-196b | 22/22 | chr3 | + | 11-32 | N/A | - | miRBase_13_0 | 20/38 | 5/91 |
11 | fru-mir-196a-1 | Fugu rubripes | fru-miR-196a | 22/22 | scaffold_66 | - | 16-37 | N/A | - | miRBase_13_0 | 20/38 | 6/91 |
12 | fru-mir-196a-2 | Fugu rubripes | fru-miR-196a | 22/22 | scaffold_12 | - | 11-32 | N/A | - | miRBase_13_0 | 20/38 | 6/91 |
13 | fru-mir-196b | Fugu rubripes | fru-miR-196b | 22/22 | scaffold_41 | + | 8-29 | N/A | - | miRBase_13_0 | 20/38 | 6/91 |
14 | gga-mir-196-1 | Gallus gallus | gga-miR-196 | 21/21 | chr27 | + | 24-44 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
15 | gga-mir-196-2 | Gallus gallus | gga-miR-196 | 21/21 | chr2 | - | 16-36 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
16 | gga-mir-196-3 | Gallus gallus | gga-miR-196 | 21/21 | chrUn_random | - | 24-44 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
17 | ggo-mir-196-1 | Gorilla gorilla | ggo-miR-196 | 21/21 | N/A | N/A | 7-27 | N/A | - | miRBase_13_0 | 20/38 | 2/91 |
18 | ggo-mir-196-2 | Gorilla gorilla | ggo-miR-196 | 21/21 | N/A | N/A | 25-45 | N/A | - | miRBase_13_0 | 20/38 | 2/91 |
19 | hsa-mir-196a-1 | Homo sapiens | hsa-miR-196a | 22/22 | chr17 | - | 7-28 | 44064851-44064920 | - | miRBase_13_0 | 20/38 | 3/91 |
20 | hsa-mir-196a-2 | Homo sapiens | hsa-miR-196a | 22/22 | chr12 | + | 25-46 | 52671789-52671898 | - | miRBase_13_0 | 20/38 | 3/91 |
21 | hsa-mir-196a-2 | Homo sapiens | hsa-miR-196a* | 22/22 | chr12 | + | 62-83 | 52671789-52671898 | - | miRBase_13_0 | 20/38 | 3/91 |
22 | hsa-mir-196b | Homo sapiens | hsa-miR-196b* | 22/22 | chr7 | - | 50-71 | 27175624-27175707 | - | miRBase_13_0 | 20/38 | 3/91 |
23 | hsa-mir-196b | Homo sapiens | hsa-miR-196b | 22/22 | chr7 | - | 15-36 | 27175624-27175707 | - | miRBase_13_0 | 20/38 | 3/91 |
24 | lla-mir-196 | Lagothrix lagotricha | lla-miR-196 | 22/22 | N/A | N/A | 25-46 | N/A | - | miRBase_13_0 | 20/38 | 1/91 |
25 | mml-mir-196a-1 | Macaca mulatta | mml-miR-196a | 21/21 | chr16 | - | 7-27 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
26 | mml-mir-196a-2 | Macaca mulatta | mml-miR-196a | 21/21 | chr11 | + | 25-45 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
27 | mml-mir-196b | Macaca mulatta | mml-miR-196b | 22/22 | chr3 | + | 15-36 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
28 | mdo-mir-196b | Monodelphis domestica | mdo-miR-196b | 21/21 | chr8 | + | 16-36 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
29 | mmu-mir-196a-1 | Mus musculus | mmu-miR-196a | 22/22 | chr11 | + | 24-45 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
30 | mmu-mir-196a-2 | Mus musculus | mmu-miR-196a* | 22/22 | chr15 | + | 52-73 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
31 | mmu-mir-196a-2 | Mus musculus | mmu-miR-196a | 22/22 | chr15 | + | 16-37 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
32 | mmu-mir-196b | Mus musculus | mmu-miR-196b | 22/22 | chr6 | - | 16-37 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
33 | oan-mir-196a | Ornithorhynchus anatinus | oan-miR-196a | 22/22 | Contig109061 | - | 29-50 | N/A | - | miRBase_13_0 | 20/38 | 2/91 |
34 | oan-mir-196a | Ornithorhynchus anatinus | oan-miR-196a* | 22/22 | Contig109061 | - | 65-86 | N/A | - | miRBase_13_0 | 20/38 | 2/91 |
35 | oan-mir-196b | Ornithorhynchus anatinus | oan-miR-196b | 21/21 | Ultra231 | - | 16-36 | N/A | - | miRBase_13_0 | 20/38 | 2/91 |
36 | oan-mir-196b | Ornithorhynchus anatinus | oan-miR-196b* | 22/22 | Ultra231 | - | 53-74 | N/A | - | miRBase_13_0 | 20/38 | 2/91 |
37 | ppa-mir-196 | Pan paniscus | ppa-miR-196 | 22/22 | N/A | N/A | 25-46 | N/A | - | miRBase_13_0 | 20/38 | 1/91 |
38 | ptr-mir-196a-1 | Pan troglodytes | ptr-miR-196a | 22/22 | chr17 | + | 6-27 | N/A | - | miRBase_13_0 | 20/38 | 4/91 |
39 | ptr-mir-196a-2 | Pan troglodytes | ptr-miR-196a | 22/22 | chr12 | - | 25-46 | N/A | - | miRBase_13_0 | 20/38 | 4/91 |
40 | ptr-mir-196b | Pan troglodytes | ptr-miR-196b | 22/22 | chr7 | - | 15-36 | N/A | - | miRBase_13_0 | 20/38 | 4/91 |
41 | ppy-mir-196-1 | Pongo pygmaeus | ppy-miR-196 | 21/21 | N/A | N/A | 7-27 | N/A | - | miRBase_13_0 | 20/38 | 2/91 |
42 | ppy-mir-196-2 | Pongo pygmaeus | ppy-miR-196-2 | 22/22 | N/A | N/A | 25-46 | N/A | - | miRBase_13_0 | 20/38 | 2/91 |
43 | rno-mir-196a | Rattus norvegicus | rno-miR-196a | 22/22 | chr7 | + | 25-46 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
44 | rno-mir-196a | Rattus norvegicus | rno-miR-196a* | 22/22 | chr7 | + | 61-82 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
45 | rno-mir-196b | Rattus norvegicus | rno-miR-196b | 22/22 | chr4 | - | 16-37 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
46 | rno-mir-196c | Rattus norvegicus | rno-miR-196c | 22/22 | chr10 | + | 11-32 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
47 | ssc-mir-196 | Sus scrofa | ssc-miR-196 | 21/21 | N/A | N/A | 22-42 | N/A | - | miRBase_13_0 | 20/38 | 1/91 |
48 | tni-mir-196a-1 | Tetraodon nigroviridis | tni-miR-196a | 22/22 | chr9 | + | 16-37 | N/A | - | miRBase_13_0 | 20/38 | 4/91 |
49 | tni-mir-196a-2 | Tetraodon nigroviridis | tni-miR-196a | 22/22 | chr21 | + | 11-32 | N/A | - | miRBase_13_0 | 20/38 | 4/91 |
50 | tni-mir-196b | Tetraodon nigroviridis | tni-miR-196b | 22/22 | chrUn_random | - | 8-29 | N/A | - | miRBase_13_0 | 20/38 | 4/91 |
51 | xtr-mir-196a | Xenopus tropicalis | xtr-miR-196a | 21/21 | scaffold_226 | + | 25-45 | N/A | - | miRBase_13_0 | 20/38 | 2/91 |
52 | xtr-mir-196b | Xenopus tropicalis | xtr-miR-196b | 21/21 | scaffold_56 | + | 16-36 | N/A | - | miRBase_13_0 | 20/38 | 2/91 |
Total | 52 record(s). |