- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-243 | Anolis carolinensis | hsa-miR-196a | 22/22 | scaffold_465 | + | 16-37 | 338138-338221 | 0.999288 | Ortholog | 20/38 | 2/91 |
2 | anoCar1-243 | Anolis carolinensis | mmu-miR-196a* | 20/22 | scaffold_465 | + | 52-71 | 338137-338223 | 0.999537 | Ortholog | 20/38 | 2/91 |
3 | anoCar1-243 | Anolis carolinensis | gga-miR-196 | 21/21 | scaffold_465 | + | 16-36 | 338138-338221 | 0.999554 | Ortholog | 20/38 | 2/91 |
4 | anoCar1-86 | Anolis carolinensis | gga-miR-196 | 20/21 | scaffold_135 | + | 49-69 | 609681-609759 | 0.863635 | Ortholog | 20/38 | 2/91 |
5 | anoCar1-86 | Anolis carolinensis | hsa-miR-196a | 21/22 | scaffold_135 | + | 49-70 | 609681-609759 | 0.847047 | Ortholog | 20/38 | 2/91 |
6 | calJac1-320 | Callithrix jacchus | hsa-miR-196b* | 22/22 | Contig2522 | + | 51-72 | 295326-295409 | 0.943188 | Ortholog | 20/38 | 2/91 |
7 | calJac1-320 | Callithrix jacchus | mdo-miR-196b | 21/21 | Contig2522 | + | 16-36 | 295326-295409 | 0.999277 | Ortholog | 20/38 | 2/91 |
8 | calJac1-320 | Callithrix jacchus | hsa-miR-196b | 22/22 | Contig2522 | + | 16-37 | 295326-295409 | 0.999054 | Ortholog | 20/38 | 2/91 |
9 | calJac1-320 | Callithrix jacchus | oan-miR-196b* | 22/22 | Contig2522 | + | 51-72 | 295327-295408 | 0.94666 | Ortholog | 20/38 | 2/91 |
10 | calJac1-320 | Callithrix jacchus | cfa-miR-196b | 23/23 | Contig2522 | + | 16-38 | 295326-295409 | 0.99941 | Ortholog | 20/38 | 2/91 |
11 | calJac1-362 | Callithrix jacchus | gga-miR-196 | 21/21 | Contig29 | + | 15-35 | 300001-300084 | 0.993346 | Ortholog | 20/38 | 2/91 |
12 | calJac1-362 | Callithrix jacchus | hsa-miR-196a | 22/22 | Contig29 | + | 15-36 | 300001-300084 | 0.99082 | Ortholog | 20/38 | 2/91 |
13 | cavPor3-588 | Cavia porcellus | hsa-miR-196b* | 22/22 | scaffold_44 | - | 49-70 | 3907431-3907510 | 0.972643 | Ortholog | 20/38 | 4/91 |
14 | cavPor3-588 | Cavia porcellus | mdo-miR-196b | 21/21 | scaffold_44 | - | 16-36 | 3907429-3907512 | 0.999277 | Ortholog | 20/38 | 4/91 |
15 | cavPor3-588 | Cavia porcellus | oan-miR-196b* | 22/22 | scaffold_44 | - | 49-70 | 3907428-3907509 | 0.959248 | Ortholog | 20/38 | 4/91 |
16 | cavPor3-588 | Cavia porcellus | hsa-miR-196b | 22/22 | scaffold_44 | - | 16-37 | 3907429-3907512 | 0.999054 | Ortholog | 20/38 | 4/91 |
17 | cavPor3-588 | Cavia porcellus | cfa-miR-196b | 23/23 | scaffold_44 | - | 16-38 | 3907429-3907512 | 0.99941 | Ortholog | 20/38 | 4/91 |
18 | cavPor3-646 | Cavia porcellus | gga-miR-196 | 21/21 | scaffold_53 | + | 15-35 | 8623776-8623859 | 0.993031 | Ortholog | 20/38 | 4/91 |
19 | cavPor3-646 | Cavia porcellus | hsa-miR-196a | 22/22 | scaffold_53 | + | 15-36 | 8623776-8623859 | 0.991359 | Ortholog | 20/38 | 4/91 |
20 | cavPor3-716 | Cavia porcellus | hsa-miR-196a | 20/22 | scaffold_73 | - | 48-69 | 5214769-5214876 | 0.800736 | Ortholog | 20/38 | 4/91 |
21 | cavPor3-778 | Cavia porcellus | hsa-miR-196a | 22/22 | scaffold_9 | - | 18-39 | 45819365-45819453 | 0.999534 | Ortholog | 20/38 | 4/91 |
22 | cavPor3-778 | Cavia porcellus | gga-miR-196 | 21/21 | scaffold_9 | - | 17-37 | 45819366-45819452 | 0.999743 | Ortholog | 20/38 | 4/91 |
23 | cavPor3-778 | Cavia porcellus | oan-miR-196a* | 21/22 | scaffold_9 | - | 49-70 | 45819366-45819448 | 0.999745 | Ortholog | 20/38 | 4/91 |
24 | cavPor3-778 | Cavia porcellus | hsa-miR-196a* | 22/22 | scaffold_9 | - | 49-70 | 45819367-45819447 | 0.998553 | Ortholog | 20/38 | 4/91 |
25 | dasNov1-103 | Dasypus novemcinctus | gga-miR-196 | 21/21 | scaffold_19893 | + | 15-35 | N/A | 0.991301 | Ortholog | 20/38 | 2/91 |
26 | dasNov1-120 | Dasypus novemcinctus | oan-miR-196a* | 21/22 | scaffold_212929 | - | 49-70 | N/A | 0.999745 | Ortholog | 20/38 | 2/91 |
27 | dasNov1-120 | Dasypus novemcinctus | hsa-miR-196a* | 22/22 | scaffold_212929 | - | 49-70 | N/A | 0.998553 | Ortholog | 20/38 | 2/91 |
28 | dasNov1-120 | Dasypus novemcinctus | hsa-miR-196a | 22/22 | scaffold_212929 | - | 18-39 | N/A | 0.999534 | Ortholog | 20/38 | 2/91 |
29 | dasNov1-120 | Dasypus novemcinctus | gga-miR-196 | 21/21 | scaffold_212929 | - | 17-37 | N/A | 0.999743 | Ortholog | 20/38 | 2/91 |
30 | echTel1-192 | Echinops telfari | oan-miR-196b* | 22/22 | scaffold_290176 | + | 51-72 | N/A | 0.94666 | Ortholog | 20/38 | 1/91 |
31 | echTel1-192 | Echinops telfari | hsa-miR-196b* | 22/22 | scaffold_290176 | + | 51-72 | N/A | 0.943188 | Ortholog | 20/38 | 1/91 |
32 | echTel1-192 | Echinops telfari | cfa-miR-196b | 23/23 | scaffold_290176 | + | 16-38 | N/A | 0.99941 | Ortholog | 20/38 | 1/91 |
33 | echTel1-192 | Echinops telfari | hsa-miR-196b | 22/22 | scaffold_290176 | + | 16-37 | N/A | 0.999054 | Ortholog | 20/38 | 1/91 |
34 | echTel1-192 | Echinops telfari | mdo-miR-196b | 21/21 | scaffold_290176 | + | 16-36 | N/A | 0.999277 | Ortholog | 20/38 | 1/91 |
35 | equCab1-474 | Equus caballus | hsa-miR-196b | 22/22 | chr4 | - | 16-37 | 57742590-57742673 | 0.999054 | Ortholog | 20/38 | 3/91 |
36 | equCab1-474 | Equus caballus | mdo-miR-196b | 21/21 | chr4 | - | 16-36 | 57742590-57742673 | 0.999277 | Ortholog | 20/38 | 3/91 |
37 | equCab1-474 | Equus caballus | cfa-miR-196b | 23/23 | chr4 | - | 16-38 | 57742590-57742673 | 0.99941 | Ortholog | 20/38 | 3/91 |
38 | equCab1-520 | Equus caballus | hsa-miR-196a* | 22/22 | chr6 | + | 51-72 | 70927772-70927856 | 0.999352 | Ortholog | 20/38 | 3/91 |
39 | equCab1-520 | Equus caballus | oan-miR-196a* | 21/22 | chr6 | + | 51-72 | 70927771-70927857 | 0.999886 | Ortholog | 20/38 | 3/91 |
40 | equCab1-520 | Equus caballus | hsa-miR-196a | 22/22 | chr6 | + | 15-36 | 70927771-70927853 | 0.999677 | Ortholog | 20/38 | 3/91 |
41 | equCab1-520 | Equus caballus | gga-miR-196 | 21/21 | chr6 | + | 15-35 | 70927771-70927853 | 0.999798 | Ortholog | 20/38 | 3/91 |
42 | equCab1-63 | Equus caballus | hsa-miR-196a | 22/22 | chr11 | - | 16-37 | 23458248-23458333 | 0.996512 | Ortholog | 20/38 | 3/91 |
43 | equCab1-63 | Equus caballus | gga-miR-196 | 21/21 | chr11 | - | 16-36 | 23458248-23458333 | 0.997575 | Ortholog | 20/38 | 3/91 |
44 | eriEur1-302 | Erinaceus europaeus | cfa-miR-196b | 23/23 | scaffold_374504 | + | 16-38 | N/A | 0.99941 | Ortholog | 20/38 | 3/91 |
45 | eriEur1-302 | Erinaceus europaeus | oan-miR-196b* | 22/22 | scaffold_374504 | + | 51-72 | N/A | 0.94666 | Ortholog | 20/38 | 3/91 |
46 | eriEur1-302 | Erinaceus europaeus | hsa-miR-196b* | 22/22 | scaffold_374504 | + | 51-72 | N/A | 0.943188 | Ortholog | 20/38 | 3/91 |
47 | eriEur1-302 | Erinaceus europaeus | mdo-miR-196b | 21/21 | scaffold_374504 | + | 16-36 | N/A | 0.999277 | Ortholog | 20/38 | 3/91 |
48 | eriEur1-302 | Erinaceus europaeus | hsa-miR-196b | 22/22 | scaffold_374504 | + | 16-37 | N/A | 0.999054 | Ortholog | 20/38 | 3/91 |
49 | eriEur1-317 | Erinaceus europaeus | gga-miR-196 | 21/21 | scaffold_375908 | - | 16-36 | N/A | 0.983871 | Ortholog | 20/38 | 3/91 |
50 | eriEur1-317 | Erinaceus europaeus | hsa-miR-196a | 22/22 | scaffold_375908 | - | 16-37 | N/A | 0.978144 | Ortholog | 20/38 | 3/91 |
51 | eriEur1-338 | Erinaceus europaeus | hsa-miR-196a | 22/22 | scaffold_379679 | - | 18-39 | N/A | 0.994448 | Ortholog | 20/38 | 3/91 |
52 | eriEur1-338 | Erinaceus europaeus | gga-miR-196 | 21/21 | scaffold_379679 | - | 17-37 | N/A | 0.996963 | Ortholog | 20/38 | 3/91 |
53 | eriEur1-338 | Erinaceus europaeus | hsa-miR-196a* | 21/22 | scaffold_379679 | - | 49-70 | N/A | 0.868571 | Ortholog | 20/38 | 3/91 |
54 | eriEur1-338 | Erinaceus europaeus | mmu-miR-196a* | 21/22 | scaffold_379679 | - | 49-70 | N/A | 0.966564 | Ortholog | 20/38 | 3/91 |
55 | felCat3-143 | Felis catus | gga-miR-196 | 21/21 | scaffold_151827 | - | 16-36 | 88095-88180 | 0.989553 | Ortholog | 20/38 | 1/91 |
56 | felCat3-143 | Felis catus | hsa-miR-196a | 22/22 | scaffold_151827 | - | 16-37 | 88095-88180 | 0.985807 | Ortholog | 20/38 | 1/91 |
57 | gasAcu1-415 | Gasterosteus aculeatus | gga-miR-196 | 21/21 | chrX | - | 16-36 | 9905443-9905526 | 0.996955 | Ortholog | 20/38 | 2/91 |
58 | gasAcu1-415 | Gasterosteus aculeatus | hsa-miR-196a | 22/22 | chrX | - | 16-37 | 9905443-9905526 | 0.995311 | Ortholog | 20/38 | 2/91 |
59 | gasAcu1-462 | Gasterosteus aculeatus | mmu-miR-196a* | 20/22 | chrXII | + | 52-71 | 11610618-11610707 | 0.999721 | Ortholog | 20/38 | 2/91 |
60 | gasAcu1-462 | Gasterosteus aculeatus | hsa-miR-196a | 22/22 | chrXII | + | 16-37 | 11610618-11610702 | 0.999532 | Ortholog | 20/38 | 2/91 |
61 | gasAcu1-462 | Gasterosteus aculeatus | gga-miR-196 | 21/21 | chrXII | + | 16-36 | 11610618-11610702 | 0.999706 | Ortholog | 20/38 | 2/91 |
62 | loxAfr1-262 | Loxodonta africana | hsa-miR-196b | 22/22 | scaffold_4768 | - | 16-37 | N/A | 0.996334 | Ortholog | 20/38 | 2/91 |
63 | loxAfr1-262 | Loxodonta africana | cfa-miR-196b | 23/23 | scaffold_4768 | - | 16-38 | N/A | 0.997671 | Ortholog | 20/38 | 2/91 |
64 | loxAfr1-262 | Loxodonta africana | mdo-miR-196b | 21/21 | scaffold_4768 | - | 16-36 | N/A | 0.997281 | Ortholog | 20/38 | 2/91 |
65 | loxAfr1-404 | Loxodonta africana | hsa-miR-196a | 22/22 | scaffold_8696 | - | 16-37 | N/A | 0.987007 | Ortholog | 20/38 | 2/91 |
66 | loxAfr1-404 | Loxodonta africana | gga-miR-196 | 21/21 | scaffold_8696 | - | 16-36 | N/A | 0.990818 | Ortholog | 20/38 | 2/91 |
67 | oryCun1-343 | Oryctolagus cuniculus | cfa-miR-196b | 21/23 | scaffold_203826 | + | 15-36 | N/A | 0.998247 | Ortholog | 20/38 | 1/91 |
68 | oryCun1-343 | Oryctolagus cuniculus | mdo-miR-196b | 20/21 | scaffold_203826 | + | 15-35 | N/A | 0.998661 | Ortholog | 20/38 | 1/91 |
69 | oryLat2-353 | Oryzias latipes | mmu-miR-196a* | 20/22 | chr7 | + | 52-71 | 12869866-12869955 | 0.999725 | Ortholog | 20/38 | 2/91 |
70 | oryLat2-353 | Oryzias latipes | cfa-miR-196b | 21/23 | chr7 | + | 16-37 | 12869866-12869950 | 0.999539 | Ortholog | 20/38 | 2/91 |
71 | oryLat2-353 | Oryzias latipes | mdo-miR-196b | 20/21 | chr7 | + | 16-36 | 12869866-12869950 | 0.99971 | Ortholog | 20/38 | 2/91 |
72 | oryLat2-45 | Oryzias latipes | mdo-miR-196b | 20/21 | chr11 | - | 18-38 | 10543708-10543794 | 0.998126 | Ortholog | 20/38 | 2/91 |
73 | oryLat2-45 | Oryzias latipes | cfa-miR-196b | 21/23 | chr11 | - | 18-39 | 10543708-10543794 | 0.997091 | Ortholog | 20/38 | 2/91 |
74 | otoGar1-12 | Otolemur garnettii | gga-miR-196 | 21/21 | scaffold_102356.1-40390 | - | 17-37 | N/A | 0.999743 | Ortholog | 20/38 | 1/91 |
75 | otoGar1-12 | Otolemur garnettii | hsa-miR-196a* | 22/22 | scaffold_102356.1-40390 | - | 49-70 | N/A | 0.998553 | Ortholog | 20/38 | 1/91 |
76 | otoGar1-12 | Otolemur garnettii | oan-miR-196a* | 21/22 | scaffold_102356.1-40390 | - | 49-70 | N/A | 0.999745 | Ortholog | 20/38 | 1/91 |
77 | otoGar1-12 | Otolemur garnettii | hsa-miR-196a | 22/22 | scaffold_102356.1-40390 | - | 18-39 | N/A | 0.999534 | Ortholog | 20/38 | 1/91 |
78 | petMar1-55 | Petromyzon marinus | gga-miR-196 | 20/21 | Contig26835 | + | 13-33 | 4522-4600 | 0.999545 | Ortholog | 20/38 | 1/91 |
79 | petMar1-55 | Petromyzon marinus | hsa-miR-196a | 21/22 | Contig26835 | + | 13-34 | 4522-4600 | 0.999383 | Ortholog | 20/38 | 1/91 |
80 | ponAbe2-133 | Pongo abelii | oan-miR-196a* | 21/22 | chr12 | + | 51-72 | 53766652-53766738 | 0.999886 | Ortholog | 20/38 | 3/91 |
81 | ponAbe2-133 | Pongo abelii | gga-miR-196 | 21/21 | chr12 | + | 15-35 | 53766652-53766734 | 0.999798 | Ortholog | 20/38 | 3/91 |
82 | ponAbe2-133 | Pongo abelii | hsa-miR-196a* | 22/22 | chr12 | + | 51-72 | 53766653-53766737 | 0.999352 | Ortholog | 20/38 | 3/91 |
83 | ponAbe2-133 | Pongo abelii | hsa-miR-196a | 22/22 | chr12 | + | 15-36 | 53766652-53766734 | 0.999677 | Ortholog | 20/38 | 3/91 |
84 | ponAbe2-327 | Pongo abelii | hsa-miR-196a | 22/22 | chr17_random | - | 16-37 | 12531628-12531713 | 0.988999 | Ortholog | 20/38 | 3/91 |
85 | ponAbe2-327 | Pongo abelii | gga-miR-196 | 21/21 | chr17_random | - | 16-36 | 12531628-12531713 | 0.992241 | Ortholog | 20/38 | 3/91 |
86 | ponAbe2-667 | Pongo abelii | hsa-miR-196b | 22/22 | chr7 | + | 16-37 | 57281199-57281282 | 0.999054 | Ortholog | 20/38 | 3/91 |
87 | ponAbe2-667 | Pongo abelii | oan-miR-196b* | 22/22 | chr7 | + | 51-72 | 57281200-57281279 | 0.979287 | Ortholog | 20/38 | 3/91 |
88 | ponAbe2-667 | Pongo abelii | mdo-miR-196b | 21/21 | chr7 | + | 16-36 | 57281199-57281282 | 0.999277 | Ortholog | 20/38 | 3/91 |
89 | ponAbe2-667 | Pongo abelii | hsa-miR-196b* | 22/22 | chr7 | + | 51-72 | 57281199-57281282 | 0.943188 | Ortholog | 20/38 | 3/91 |
90 | ponAbe2-667 | Pongo abelii | cfa-miR-196b | 23/23 | chr7 | + | 16-38 | 57281199-57281282 | 0.99941 | Ortholog | 20/38 | 3/91 |
91 | sorAra1-131 | Sorex araneus | gga-miR-196 | 21/21 | scaffold_241265 | - | 16-36 | N/A | 0.978052 | Ortholog | 20/38 | 1/91 |
92 | sorAra1-131 | Sorex araneus | hsa-miR-196a | 22/22 | scaffold_241265 | - | 16-37 | N/A | 0.968755 | Ortholog | 20/38 | 1/91 |
93 | taeGut1-159 | Taeniopygia guttata | hsa-miR-196a | 22/22 | chr2 | - | 48-69 | 52627170-52627252 | 0.95383 | Ortholog | 20/38 | 3/91 |
94 | taeGut1-159 | Taeniopygia guttata | gga-miR-196 | 21/21 | chr2 | - | 50-70 | 52627167-52627254 | 0.973399 | Ortholog | 20/38 | 3/91 |
95 | taeGut1-225 | Taeniopygia guttata | gga-miR-196 | 20/21 | chr27 | + | 41-61 | 4521331-4521415 | 0.926424 | Ortholog | 20/38 | 3/91 |
96 | taeGut1-225 | Taeniopygia guttata | hsa-miR-196a | 21/22 | chr27 | + | 41-62 | 4521331-4521415 | 0.937843 | Ortholog | 20/38 | 3/91 |
97 | taeGut1-332 | Taeniopygia guttata | gga-miR-196 | 21/21 | chrUn | + | 18-38 | 4882310-4882396 | 0.999168 | Ortholog | 20/38 | 3/91 |
98 | taeGut1-332 | Taeniopygia guttata | mmu-miR-196a* | 20/22 | chrUn | + | 52-71 | 4882311-4882397 | 0.999158 | Ortholog | 20/38 | 3/91 |
99 | taeGut1-332 | Taeniopygia guttata | hsa-miR-196a | 22/22 | chrUn | + | 18-39 | 4882310-4882396 | 0.998667 | Ortholog | 20/38 | 3/91 |
100 | tupBel1-194 | Tupaia belangeri | hsa-miR-196b* | 22/22 | scaffold_121135.1-353026 | - | 49-70 | N/A | 0.975236 | Ortholog | 20/38 | 2/91 |
101 | tupBel1-194 | Tupaia belangeri | oan-miR-196b* | 22/22 | scaffold_121135.1-353026 | - | 49-70 | N/A | 0.965741 | Ortholog | 20/38 | 2/91 |
102 | tupBel1-379 | Tupaia belangeri | gga-miR-196 | 21/21 | scaffold_132535.1-238420 | - | 17-37 | N/A | 0.999743 | Ortholog | 20/38 | 2/91 |
103 | tupBel1-379 | Tupaia belangeri | hsa-miR-196a* | 22/22 | scaffold_132535.1-238420 | - | 49-70 | N/A | 0.998553 | Ortholog | 20/38 | 2/91 |
104 | tupBel1-379 | Tupaia belangeri | hsa-miR-196a | 22/22 | scaffold_132535.1-238420 | - | 18-39 | N/A | 0.999534 | Ortholog | 20/38 | 2/91 |
105 | tupBel1-379 | Tupaia belangeri | oan-miR-196a* | 21/22 | scaffold_132535.1-238420 | - | 49-70 | N/A | 0.999745 | Ortholog | 20/38 | 2/91 |
Total | 105 record(s). |