- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | danRer5-12 | Danio rerio | dre-miR-196a | 21/22 | chr11 | + | 16-37 | 577340-577424 | 0.997577 | Paralog | 20/38 | 5/91 |
2 | danRer5-12 | Danio rerio | gga-miR-196 | 20/21 | chr11 | + | 16-36 | 577340-577424 | 0.998461 | Paralog | 20/38 | 5/91 |
3 | danRer5-71 | Danio rerio | dre-miR-196a | 21/22 | chr16 | - | 17-38 | 15968480-15968567 | 0.988151 | Paralog | 20/38 | 5/91 |
4 | danRer5-71 | Danio rerio | xtr-miR-196b | 21/21 | chr16 | - | 15-35 | 15968481-15968565 | 0.991072 | Paralog | 20/38 | 5/91 |
5 | fr2-197 | Fugu rubripes | gga-miR-196 | 21/21 | chrUn | - | 16-36 | 43437612-43437695 | 0.991932 | Paralog | 20/38 | 6/91 |
6 | fr2-197 | Fugu rubripes | fru-miR-196a | 22/22 | chrUn | - | 16-37 | 43437612-43437695 | 0.987553 | Paralog | 20/38 | 6/91 |
7 | fr2-246 | Fugu rubripes | gga-miR-196 | 21/21 | chrUn | - | 18-38 | 135244747-135244834 | 0.999598 | Paralog | 20/38 | 6/91 |
8 | fr2-246 | Fugu rubripes | fru-miR-196a | 22/22 | chrUn | - | 19-40 | 135244746-135244835 | 0.999291 | Paralog | 20/38 | 6/91 |
9 | fr2-246 | Fugu rubripes | mmu-miR-196a* | 20/22 | chrUn | - | 49-68 | 135244746-135244829 | 0.998694 | Paralog | 20/38 | 6/91 |
10 | fr2-39 | Fugu rubripes | fru-miR-196b | 22/22 | chrUn | + | 11-32 | 98694356-98694434 | 0.999402 | Paralog | 20/38 | 6/91 |
11 | fr2-39 | Fugu rubripes | gga-miR-196 | 20/21 | chrUn | + | 11-31 | 98694356-98694434 | 0.999626 | Paralog | 20/38 | 6/91 |
12 | monDom4-179 | Monodelphis domestica | mdo-miR-196b | 21/21 | chr2 | - | 16-36 | 201215973-201216058 | 0.980432 | Paralog | 20/38 | 3/91 |
13 | monDom4-179 | Monodelphis domestica | hsa-miR-196b | 22/22 | chr2 | - | 16-37 | 201215973-201216058 | 0.973152 | Paralog | 20/38 | 3/91 |
14 | monDom4-439 | Monodelphis domestica | hsa-miR-196b | 22/22 | chr8 | + | 16-37 | 293271605-293271689 | 0.9977 | Paralog | 20/38 | 3/91 |
15 | monDom4-439 | Monodelphis domestica | mdo-miR-196b | 21/21 | chr8 | + | 16-36 | 293271605-293271689 | 0.998167 | Paralog | 20/38 | 3/91 |
16 | panTro2-90 | Pan troglodytes | gga-miR-196 | 20/21 | chr17 | - | 23-43 | 9121108-9121198 | 0.835784 | Paralog | 20/38 | 4/91 |
17 | panTro2-90 | Pan troglodytes | ptr-miR-196a | 21/22 | chr17 | - | 28-49 | 9121105-9121203 | 0.845309 | Paralog | 20/38 | 4/91 |
18 | tetNig1-195 | Tetraodon nigroviridis | tni-miR-196a | 21/22 | chr8 | + | 13-34 | 6618918-6618998 | 0.990794 | Paralog | 20/38 | 4/91 |
19 | tetNig1-195 | Tetraodon nigroviridis | gga-miR-196 | 20/21 | chr8 | + | 13-33 | 6618918-6618998 | 0.993343 | Paralog | 20/38 | 4/91 |
Total | 19 record(s). |