- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-199a-1 | Bos taurus | bta-miR-199a-3p | 22/22 | chr16 | - | 70-91 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
2 | bta-mir-199a-1 | Bos taurus | bta-miR-199a-5p | 22/22 | chr16 | - | 31-52 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
3 | bta-mir-199a-2 | Bos taurus | bta-miR-199a-5p | 22/22 | chr7 | - | 6-27 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
4 | bta-mir-199a-2 | Bos taurus | bta-miR-199a-3p | 22/22 | chr7 | - | 47-68 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
5 | bta-mir-199b | Bos taurus | bta-miR-199b | 23/23 | chr11 | - | 16-38 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
6 | cfa-mir-199-1 | Canis familiaris | cfa-miR-199 | 21/21 | chr20 | + | 41-61 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
7 | cfa-mir-199-2 | Canis familiaris | cfa-miR-199 | 21/21 | chr7 | + | 39-59 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
8 | cfa-mir-199-3 | Canis familiaris | cfa-miR-199 | 21/21 | chr9 | + | 39-59 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
9 | cin-mir-199 | Ciona intestinalis | cin-miR-199-3p | 22/22 | N/A | N/A | 66-87 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
10 | dre-mir-199-1 | Danio rerio | dre-miR-199* | 22/22 | chr20 | - | 53-74 | N/A | - | miRBase_13_0 | 22/39 | 5/87 |
11 | dre-mir-199-1 | Danio rerio | dre-miR-199 | 23/23 | chr20 | - | 15-37 | N/A | - | miRBase_13_0 | 22/39 | 5/87 |
12 | dre-mir-199-2 | Danio rerio | dre-miR-199 | 23/23 | Zv7_scaffold2501 | - | 30-52 | N/A | - | miRBase_13_0 | 22/39 | 5/87 |
13 | dre-mir-199-2 | Danio rerio | dre-miR-199* | 22/22 | Zv7_scaffold2501 | - | 68-89 | N/A | - | miRBase_13_0 | 22/39 | 5/87 |
14 | dre-mir-199-3 | Danio rerio | dre-miR-199 | 23/23 | chr3 | + | 16-38 | N/A | - | miRBase_13_0 | 22/39 | 5/87 |
15 | fru-mir-199-1 | Fugu rubripes | fru-miR-199 | 23/23 | scaffold_13 | + | 15-37 | N/A | - | miRBase_13_0 | 22/39 | 7/87 |
16 | fru-mir-199-2 | Fugu rubripes | fru-miR-199 | 23/23 | scaffold_27 | + | 8-30 | N/A | - | miRBase_13_0 | 22/39 | 7/87 |
17 | fru-mir-199-3 | Fugu rubripes | fru-miR-199 | 23/23 | scaffold_139 | - | 17-39 | N/A | - | miRBase_13_0 | 22/39 | 7/87 |
18 | gga-mir-199-1 | Gallus gallus | gga-miR-199* | 20/20 | chr17 | + | 53-72 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
19 | gga-mir-199-1 | Gallus gallus | gga-miR-199 | 23/23 | chr17 | + | 15-37 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
20 | gga-mir-199-2 | Gallus gallus | gga-miR-199* | 20/20 | chr8 | + | 67-86 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
21 | gga-mir-199-2 | Gallus gallus | gga-miR-199 | 23/23 | chr8 | + | 29-51 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
22 | gga-mir-199b | Gallus gallus | gga-miR-199b | 20/20 | chr3 | + | 39-58 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
23 | ggo-mir-199a | Gorilla gorilla | ggo-miR-199a | 23/23 | N/A | N/A | 31-53 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
24 | hsa-mir-199a-1 | Homo sapiens | hsa-miR-199a-5p | 23/23 | chr19 | - | 6-28 | 10789102-10789172 | - | miRBase_13_0 | 22/39 | 3/87 |
25 | hsa-mir-199a-1 | Homo sapiens | hsa-miR-199a-3p | 22/22 | chr19 | - | 47-68 | 10789102-10789172 | - | miRBase_13_0 | 22/39 | 3/87 |
26 | hsa-mir-199a-2 | Homo sapiens | hsa-miR-199a-5p | 23/23 | chr1 | - | 31-53 | 170380298-170380407 | - | miRBase_13_0 | 22/39 | 3/87 |
27 | hsa-mir-199a-2 | Homo sapiens | hsa-miR-199a-3p | 22/22 | chr1 | - | 70-91 | 170380298-170380407 | - | miRBase_13_0 | 22/39 | 3/87 |
28 | hsa-mir-199b | Homo sapiens | hsa-miR-199b-5p | 23/23 | chr9 | - | 26-48 | 130046821-130046930 | - | miRBase_13_0 | 22/39 | 3/87 |
29 | hsa-mir-199b | Homo sapiens | hsa-miR-199b-3p | 22/22 | chr9 | - | 65-86 | 130046821-130046930 | - | miRBase_13_0 | 22/39 | 3/87 |
30 | lla-mir-199a | Lagothrix lagotricha | lla-miR-199a | 23/23 | N/A | N/A | 31-53 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
31 | mml-mir-199a-1 | Macaca mulatta | mml-miR-199a | 23/23 | chr1 | - | 31-53 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
32 | mml-mir-199a-2 | Macaca mulatta | mml-miR-199a-5p | 23/23 | chr19 | - | 6-28 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
33 | mml-mir-199a-2 | Macaca mulatta | mml-miR-199a-3p | 22/22 | chr19 | - | 47-68 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
34 | mne-mir-199a | Macaca nemestrina | mne-miR-199a | 23/23 | N/A | N/A | 31-53 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
35 | mdo-mir-199b | Monodelphis domestica | mdo-miR-199b | 23/23 | chr1 | - | 15-37 | N/A | - | miRBase_13_0 | 22/39 | 4/87 |
36 | mmu-mir-199a-1 | Mus musculus | mmu-miR-199a-3p | 22/22 | chr9 | - | 46-67 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
37 | mmu-mir-199a-1 | Mus musculus | mmu-miR-199a-5p | 23/23 | chr9 | - | 6-28 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
38 | mmu-mir-199a-2 | Mus musculus | mmu-miR-199a-3p | 22/22 | chr1 | + | 70-91 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
39 | mmu-mir-199a-2 | Mus musculus | mmu-miR-199a-5p | 23/23 | chr1 | + | 31-53 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
40 | mmu-mir-199b | Mus musculus | mmu-miR-199b | 22/22 | chr2 | + | 65-86 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
41 | mmu-mir-199b | Mus musculus | mmu-miR-199b* | 23/23 | chr2 | + | 26-48 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
42 | oan-mir-199 | Ornithorhynchus anatinus | oan-miR-199* | 22/22 | Ultra341 | - | 31-52 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
43 | oan-mir-199 | Ornithorhynchus anatinus | oan-miR-199 | 21/21 | Ultra341 | - | 70-90 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
44 | ppa-mir-199a | Pan paniscus | ppa-miR-199a | 23/23 | N/A | N/A | 31-53 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
45 | ptr-mir-199a-1 | Pan troglodytes | ptr-miR-199a-3p | 22/22 | chr19 | - | 47-68 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
46 | ptr-mir-199a-2 | Pan troglodytes | ptr-miR-199a-5p | 23/23 | chr1 | - | 31-53 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
47 | ptr-mir-199b | Pan troglodytes | ptr-miR-199b | 22/22 | chr9 | - | 65-86 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
48 | ppy-mir-199a | Pongo pygmaeus | ppy-miR-199a | 23/23 | N/A | N/A | 31-53 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
49 | rno-mir-199a | Rattus norvegicus | rno-miR-199a-3p | 22/22 | chr13 | + | 70-91 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
50 | rno-mir-199a | Rattus norvegicus | rno-miR-199a-5p | 23/23 | chr13 | + | 31-53 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
51 | sla-mir-199a | Saguinus labiatus | sla-miR-199a | 23/23 | N/A | N/A | 31-53 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
52 | ssc-mir-199b | Sus scrofa | ssc-miR-199b* | 22/22 | chr1 | - | 46-67 | N/A | - | miRBase_13_0 | 22/39 | 1/87 |
53 | tni-mir-199-1 | Tetraodon nigroviridis | tni-miR-199 | 23/23 | chr15 | + | 14-36 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
54 | tni-mir-199-2 | Tetraodon nigroviridis | tni-miR-199 | 23/23 | chr4 | - | 8-30 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
55 | tni-mir-199-3 | Tetraodon nigroviridis | tni-miR-199 | 23/23 | chr3 | - | 15-37 | N/A | - | miRBase_13_0 | 22/39 | 3/87 |
56 | xtr-mir-199a | Xenopus tropicalis | xtr-miR-199a | 23/23 | scaffold_85 | - | 19-41 | N/A | - | miRBase_13_0 | 22/39 | 2/87 |
57 | xtr-mir-199a | Xenopus tropicalis | xtr-miR-199a* | 22/22 | scaffold_85 | - | 57-78 | N/A | - | miRBase_13_0 | 22/39 | 2/87 |
58 | xtr-mir-199b | Xenopus tropicalis | xtr-miR-199b | 23/23 | scaffold_845 | + | 31-53 | N/A | - | miRBase_13_0 | 22/39 | 2/87 |
Total | 58 record(s). |