- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | danRer5-263 | Danio rerio | bta-miR-199a-5p | 22/22 | chr5 | + | 12-33 | 56949465-56949545 | 0.998307 | Paralog | 22/39 | 5/87 |
2 | danRer5-263 | Danio rerio | dre-miR-199* | 22/22 | chr5 | + | 51-72 | 56949464-56949547 | 0.999906 | Paralog | 22/39 | 5/87 |
3 | danRer5-263 | Danio rerio | gga-miR-199* | 20/20 | chr5 | + | 52-71 | 56949463-56949548 | 0.999824 | Paralog | 22/39 | 5/87 |
4 | danRer5-263 | Danio rerio | oan-miR-199 | 21/21 | chr5 | + | 51-71 | 56949465-56949545 | 0.999874 | Paralog | 22/39 | 5/87 |
5 | danRer5-263 | Danio rerio | dre-miR-199 | 23/23 | chr5 | + | 12-34 | 56949465-56949545 | 0.996508 | Paralog | 22/39 | 5/87 |
6 | danRer5-263 | Danio rerio | mmu-miR-199a-3p | 22/22 | chr5 | + | 51-72 | 56949465-56949545 | 0.999912 | Paralog | 22/39 | 5/87 |
7 | danRer5-334 | Danio rerio | bta-miR-199a-5p | 22/22 | Zv7_scaffold2501 | - | 14-35 | 27376-27460 | 0.999332 | Paralog | 22/39 | 5/87 |
8 | danRer5-334 | Danio rerio | dre-miR-199* | 22/22 | Zv7_scaffold2501 | - | 49-70 | 27379-27457 | 0.999944 | Paralog | 22/39 | 5/87 |
9 | danRer5-334 | Danio rerio | mmu-miR-199a-3p | 22/22 | Zv7_scaffold2501 | - | 49-70 | 27380-27456 | 0.999916 | Paralog | 22/39 | 5/87 |
10 | danRer5-334 | Danio rerio | gga-miR-199* | 20/20 | Zv7_scaffold2501 | - | 50-69 | 27378-27458 | 0.99992 | Paralog | 22/39 | 5/87 |
11 | danRer5-334 | Danio rerio | oan-miR-199 | 21/21 | Zv7_scaffold2501 | - | 50-70 | 27379-27457 | 0.999926 | Paralog | 22/39 | 5/87 |
12 | danRer5-334 | Danio rerio | dre-miR-199 | 23/23 | Zv7_scaffold2501 | - | 14-36 | 27376-27460 | 0.998727 | Paralog | 22/39 | 5/87 |
13 | fr2-150 | Fugu rubripes | fru-miR-199 | 23/23 | chrUn | + | 12-34 | 306940395-306940475 | 0.995775 | Paralog | 22/39 | 7/87 |
14 | fr2-150 | Fugu rubripes | bta-miR-199a-5p | 22/22 | chrUn | + | 12-33 | 306940395-306940475 | 0.99794 | Paralog | 22/39 | 7/87 |
15 | fr2-150 | Fugu rubripes | mmu-miR-199a-3p | 22/22 | chrUn | + | 51-72 | 306940395-306940475 | 0.999895 | Paralog | 22/39 | 7/87 |
16 | fr2-150 | Fugu rubripes | oan-miR-199 | 21/21 | chrUn | + | 51-71 | 306940395-306940475 | 0.999849 | Paralog | 22/39 | 7/87 |
17 | fr2-150 | Fugu rubripes | gga-miR-199* | 20/20 | chrUn | + | 52-71 | 306940393-306940478 | 0.999782 | Paralog | 22/39 | 7/87 |
18 | fr2-150 | Fugu rubripes | dre-miR-199* | 22/22 | chrUn | + | 51-72 | 306940394-306940477 | 0.999888 | Paralog | 22/39 | 7/87 |
19 | fr2-286 | Fugu rubripes | bta-miR-199a-5p | 22/22 | chrUn | - | 14-35 | 208426833-208426917 | 0.993752 | Paralog | 22/39 | 7/87 |
20 | fr2-286 | Fugu rubripes | gga-miR-199* | 19/20 | chrUn | - | 51-69 | 208426834-208426915 | 0.998484 | Paralog | 22/39 | 7/87 |
21 | fr2-286 | Fugu rubripes | dre-miR-199* | 21/22 | chrUn | - | 50-70 | 208426836-208426914 | 0.999513 | Paralog | 22/39 | 7/87 |
22 | fr2-286 | Fugu rubripes | fru-miR-199 | 23/23 | chrUn | - | 14-36 | 208426833-208426917 | 0.987802 | Paralog | 22/39 | 7/87 |
23 | fr2-286 | Fugu rubripes | mmu-miR-199a-3p | 22/22 | chrUn | - | 49-70 | 208426837-208426913 | 0.999602 | Paralog | 22/39 | 7/87 |
24 | fr2-31 | Fugu rubripes | bta-miR-199a-5p | 22/22 | chrUn | + | 12-33 | 45694177-45694257 | 0.997407 | Paralog | 22/39 | 7/87 |
25 | fr2-31 | Fugu rubripes | fru-miR-199 | 23/23 | chrUn | + | 12-34 | 45694177-45694257 | 0.995279 | Paralog | 22/39 | 7/87 |
26 | fr2-33 | Fugu rubripes | bta-miR-199a-5p | 22/22 | chrUn | + | 10-31 | 75433367-75433443 | 0.998036 | Paralog | 22/39 | 7/87 |
27 | fr2-33 | Fugu rubripes | fru-miR-199 | 23/23 | chrUn | + | 13-35 | 75433364-75433446 | 0.996967 | Paralog | 22/39 | 7/87 |
28 | rheMac2-104 | Macaca mulatta | dre-miR-199* | 22/22 | chr15 | + | 26-47 | 10635493-10635587 | 0.998476 | Paralog | 22/39 | 3/87 |
29 | rheMac2-104 | Macaca mulatta | oan-miR-199 | 21/21 | chr15 | + | 27-47 | 10635493-10635587 | 0.997889 | Paralog | 22/39 | 3/87 |
30 | rheMac2-104 | Macaca mulatta | mml-miR-199a-3p | 22/22 | chr15 | + | 27-48 | 10635493-10635587 | 0.996891 | Paralog | 22/39 | 3/87 |
31 | monDom4-153 | Monodelphis domestica | bta-miR-199a-5p | 22/22 | chr2 | - | 14-35 | 64374162-64374246 | 0.996381 | Paralog | 22/39 | 4/87 |
32 | monDom4-153 | Monodelphis domestica | mmu-miR-199a-5p | 23/23 | chr2 | - | 14-36 | 64374162-64374246 | 0.993467 | Paralog | 22/39 | 4/87 |
33 | monDom4-237 | Monodelphis domestica | bta-miR-199a-5p | 21/22 | chr3 | + | 9-29 | 430288125-430288202 | 0.955139 | Paralog | 22/39 | 4/87 |
34 | monDom4-237 | Monodelphis domestica | mmu-miR-199a-3p | 22/22 | chr3 | + | 50-71 | 430288125-430288202 | 0.996285 | Paralog | 22/39 | 4/87 |
35 | monDom4-237 | Monodelphis domestica | oan-miR-199 | 21/21 | chr3 | + | 50-70 | 430288125-430288202 | 0.995738 | Paralog | 22/39 | 4/87 |
36 | monDom4-237 | Monodelphis domestica | gga-miR-199* | 20/20 | chr3 | + | 52-71 | 430288122-430288205 | 0.996106 | Paralog | 22/39 | 4/87 |
37 | monDom4-237 | Monodelphis domestica | dre-miR-199* | 22/22 | chr3 | + | 51-72 | 430288123-430288204 | 0.998439 | Paralog | 22/39 | 4/87 |
38 | monDom4-75 | Monodelphis domestica | oan-miR-199 | 21/21 | chr1 | - | 50-70 | 453998863-453998942 | 0.99868 | Paralog | 22/39 | 4/87 |
39 | monDom4-75 | Monodelphis domestica | gga-miR-199* | 20/20 | chr1 | - | 50-69 | 453998862-453998943 | 0.99808 | Paralog | 22/39 | 4/87 |
40 | monDom4-75 | Monodelphis domestica | mdo-miR-199b | 23/23 | chr1 | - | 13-35 | 453998861-453998944 | 0.995326 | Paralog | 22/39 | 4/87 |
41 | monDom4-75 | Monodelphis domestica | mmu-miR-199a-3p | 22/22 | chr1 | - | 49-70 | 453998865-453998941 | 0.998723 | Paralog | 22/39 | 4/87 |
42 | monDom4-75 | Monodelphis domestica | dre-miR-199* | 22/22 | chr1 | - | 49-70 | 453998863-453998942 | 0.999039 | Paralog | 22/39 | 4/87 |
Total | 42 record(s). |