- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | fr2-268 | Fugu rubripes | ssc-miR-20 | 22/22 | chrUn | - | 18-39 | 176112433-176112520 | 0.999658 | Paralog | 24/42 | 4/98 |
2 | fr2-268 | Fugu rubripes | fru-miR-20 | 23/23 | chrUn | - | 18-40 | 176112433-176112520 | 0.999458 | Paralog | 24/42 | 4/98 |
3 | fr2-268 | Fugu rubripes | oan-miR-20a | 20/20 | chrUn | - | 18-37 | 176112433-176112520 | 0.999418 | Paralog | 24/42 | 4/98 |
4 | fr2-272 | Fugu rubripes | oan-miR-20a | 18/20 | chrUn | - | 15-33 | 176112956-176113038 | 0.994714 | Paralog | 24/42 | 4/98 |
5 | fr2-272 | Fugu rubripes | xla-miR-20 | 21/23 | chrUn | - | 19-41 | 176112954-176113043 | 0.994603 | Paralog | 24/42 | 4/98 |
6 | fr2-272 | Fugu rubripes | ssc-miR-20 | 20/22 | chrUn | - | 20-40 | 176112954-176113043 | 0.998027 | Paralog | 24/42 | 4/98 |
7 | fr2-5 | Fugu rubripes | ssc-miR-20 | 22/22 | chrUn | + | 19-40 | 5701500-5701587 | 0.997608 | Paralog | 24/42 | 4/98 |
8 | fr2-5 | Fugu rubripes | fru-miR-20 | 23/23 | chrUn | + | 20-42 | 5701499-5701588 | 0.996411 | Paralog | 24/42 | 4/98 |
9 | fr2-5 | Fugu rubripes | oan-miR-20a | 20/20 | chrUn | + | 15-34 | 5701504-5701585 | 0.996127 | Paralog | 24/42 | 4/98 |
10 | fr2-5 | Fugu rubripes | dre-miR-20a* | 21/22 | chrUn | + | 50-71 | 5701504-5701585 | 0.988562 | Paralog | 24/42 | 4/98 |
11 | monDom4-414 | Monodelphis domestica | mdo-miR-20 | 23/23 | chr7 | - | 17-39 | 110235198-110235284 | 0.999511 | Paralog | 24/42 | 5/98 |
12 | monDom4-414 | Monodelphis domestica | oan-miR-20a-2* | 22/23 | chr7 | - | 47-69 | 110235202-110235278 | 0.999643 | Paralog | 24/42 | 5/98 |
13 | monDom4-414 | Monodelphis domestica | hsa-miR-20a* | 21/22 | chr7 | - | 47-68 | 110235202-110235278 | 0.999453 | Paralog | 24/42 | 5/98 |
14 | monDom4-414 | Monodelphis domestica | ssc-miR-20 | 22/22 | chr7 | - | 17-38 | 110235198-110235284 | 0.9997 | Paralog | 24/42 | 5/98 |
15 | monDom4-414 | Monodelphis domestica | oan-miR-20a | 20/20 | chr7 | - | 16-35 | 110235198-110235284 | 0.999631 | Paralog | 24/42 | 5/98 |
16 | monDom4-418 | Monodelphis domestica | xla-miR-20 | 21/23 | chr7 | - | 14-36 | 110235654-110235738 | 0.911338 | Paralog | 24/42 | 5/98 |
17 | monDom4-418 | Monodelphis domestica | ssc-miR-20 | 20/22 | chr7 | - | 15-35 | 110235654-110235738 | 0.977616 | Paralog | 24/42 | 5/98 |
18 | monDom4-491 | Monodelphis domestica | mdo-miR-20 | 21/23 | chrX | - | 15-36 | 27802052-27802135 | 0.99992 | Paralog | 24/42 | 5/98 |
19 | monDom4-491 | Monodelphis domestica | xla-miR-20 | 23/23 | chrX | - | 14-36 | 27802052-27802135 | 0.999816 | Paralog | 24/42 | 5/98 |
20 | monDom4-491 | Monodelphis domestica | rno-miR-20b-5p | 21/21 | chrX | - | 14-34 | 27802052-27802135 | 0.999833 | Paralog | 24/42 | 5/98 |
21 | monDom4-491 | Monodelphis domestica | ssc-miR-20 | 20/22 | chrX | - | 15-35 | 27802052-27802135 | 0.999959 | Paralog | 24/42 | 5/98 |
22 | monDom4-492 | Monodelphis domestica | oan-miR-20a | 19/20 | chrX | - | 23-41 | 27802557-27802648 | 0.999733 | Paralog | 24/42 | 5/98 |
23 | monDom4-492 | Monodelphis domestica | ssc-miR-20 | 21/22 | chrX | - | 23-43 | 27802557-27802648 | 0.999855 | Paralog | 24/42 | 5/98 |
24 | tetNig1-165 | Tetraodon nigroviridis | tni-miR-20 | 23/23 | chr5 | - | 21-43 | 8147796-8147887 | 0.999499 | Paralog | 24/42 | 2/98 |
25 | tetNig1-165 | Tetraodon nigroviridis | ssc-miR-20 | 22/22 | chr5 | - | 21-42 | 8147796-8147887 | 0.999675 | Paralog | 24/42 | 2/98 |
26 | tetNig1-165 | Tetraodon nigroviridis | oan-miR-20a | 20/20 | chr5 | - | 13-32 | 8147799-8147879 | 0.999457 | Paralog | 24/42 | 2/98 |
Total | 26 record(s). |