- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-371 | Anolis carolinensis | bfl-miR-200a | 20/22 | scaffold_876 | + | 52-71 | 286021-286104 | 0.998121 | Ortholog | 21/37 | 2/88 |
2 | anoCar1-371 | Anolis carolinensis | bta-miR-200b | 21/21 | scaffold_876 | + | 51-71 | 286021-286104 | 0.998669 | Ortholog | 21/37 | 2/88 |
3 | anoCar1-371 | Anolis carolinensis | gga-miR-200b | 23/23 | scaffold_876 | + | 50-72 | 286022-286103 | 0.998975 | Ortholog | 21/37 | 2/88 |
4 | anoCar1-373 | Anolis carolinensis | mmu-miR-200a | 22/22 | scaffold_876 | + | 51-72 | 288029-288109 | 0.999862 | Ortholog | 21/37 | 2/88 |
5 | anoCar1-373 | Anolis carolinensis | bta-miR-200a | 23/23 | scaffold_876 | + | 50-72 | 288030-288108 | 0.999802 | Ortholog | 21/37 | 2/88 |
6 | calJac1-430 | Callithrix jacchus | hsa-miR-200c | 23/23 | Contig3751 | + | 50-72 | 113908-113987 | 0.999934 | Ortholog | 21/37 | 1/88 |
7 | calJac1-430 | Callithrix jacchus | rno-miR-200c | 22/22 | Contig3751 | + | 51-72 | 113907-113988 | 0.999951 | Ortholog | 21/37 | 1/88 |
8 | calJac1-430 | Callithrix jacchus | mml-miR-200c | 22/22 | Contig3751 | + | 51-72 | 113908-113987 | 0.999875 | Ortholog | 21/37 | 1/88 |
9 | calJac1-430 | Callithrix jacchus | hsa-miR-200c* | 22/22 | Contig3751 | + | 50-71 | 113869-113964 | 0.94676 | Ortholog | 21/37 | 1/88 |
10 | cavPor3-285 | Cavia porcellus | mdo-miR-200a* | 20/22 | scaffold_186 | - | 12-33 | 1149691-1149769 | 0.995534 | Ortholog | 21/37 | 3/88 |
11 | cavPor3-286 | Cavia porcellus | oan-miR-200b* | 21/21 | scaffold_186 | - | 16-36 | 1150396-1150481 | 0.999206 | Ortholog | 21/37 | 3/88 |
12 | cavPor3-58 | Cavia porcellus | mml-miR-200c | 22/22 | scaffold_107 | - | 49-70 | 310450-310526 | 0.99996 | Ortholog | 21/37 | 3/88 |
13 | cavPor3-58 | Cavia porcellus | hsa-miR-200c | 23/23 | scaffold_107 | - | 49-71 | 310449-310527 | 0.999982 | Ortholog | 21/37 | 3/88 |
14 | cavPor3-58 | Cavia porcellus | rno-miR-200c | 22/22 | scaffold_107 | - | 49-70 | 310449-310527 | 0.999976 | Ortholog | 21/37 | 3/88 |
15 | echTel1-91 | Echinops telfari | bta-miR-200a | 23/23 | scaffold_232887 | + | 50-72 | N/A | 0.999892 | Ortholog | 21/37 | 1/88 |
16 | echTel1-91 | Echinops telfari | mmu-miR-200a | 22/22 | scaffold_232887 | + | 50-71 | N/A | 0.999894 | Ortholog | 21/37 | 1/88 |
17 | echTel1-91 | Echinops telfari | cfa-miR-200a | 22/22 | scaffold_232887 | + | 12-33 | N/A | 0.99656 | Ortholog | 21/37 | 1/88 |
18 | equCab1-514 | Equus caballus | rno-miR-200c | 22/22 | chr6 | + | 51-72 | 34662616-34662696 | 0.99995 | Ortholog | 21/37 | 3/88 |
19 | equCab1-514 | Equus caballus | mml-miR-200c | 22/22 | chr6 | + | 51-72 | 34662617-34662695 | 0.999838 | Ortholog | 21/37 | 3/88 |
20 | equCab1-514 | Equus caballus | hsa-miR-200c | 23/23 | chr6 | + | 50-72 | 34662617-34662695 | 0.999915 | Ortholog | 21/37 | 3/88 |
21 | equCab1-514 | Equus caballus | hsa-miR-200c* | 22/22 | chr6 | + | 10-31 | 34662617-34662695 | 0.999139 | Ortholog | 21/37 | 3/88 |
22 | equCab1-736 | Equus caballus | bta-miR-200a | 23/23 | chrUn | - | 49-71 | 253930034-253930112 | 0.999936 | Ortholog | 21/37 | 3/88 |
23 | equCab1-736 | Equus caballus | mmu-miR-200a | 22/22 | chrUn | - | 49-70 | 253930034-253930112 | 0.999913 | Ortholog | 21/37 | 3/88 |
24 | equCab1-736 | Equus caballus | mdo-miR-200a* | 20/22 | chrUn | - | 14-35 | 253930031-253930115 | 0.995671 | Ortholog | 21/37 | 3/88 |
25 | equCab1-739 | Equus caballus | rno-miR-200b | 23/23 | chrUn | - | 49-71 | 253930685-253930765 | 0.999971 | Ortholog | 21/37 | 3/88 |
26 | equCab1-739 | Equus caballus | bfl-miR-200a | 20/22 | chrUn | - | 50-69 | 253930685-253930765 | 0.999967 | Ortholog | 21/37 | 3/88 |
27 | equCab1-739 | Equus caballus | cin-miR-200 | 21/22 | chrUn | - | 49-70 | 253930685-253930765 | 0.999978 | Ortholog | 21/37 | 3/88 |
28 | equCab1-739 | Equus caballus | bta-miR-200b | 21/21 | chrUn | - | 50-70 | 253930684-253930766 | 0.999981 | Ortholog | 21/37 | 3/88 |
29 | equCab1-739 | Equus caballus | oan-miR-200b* | 21/21 | chrUn | - | 16-36 | 253930683-253930767 | 0.999666 | Ortholog | 21/37 | 3/88 |
30 | eriEur1-169 | Erinaceus europaeus | bfl-miR-200a | 20/22 | scaffold_348240 | + | 52-71 | N/A | 0.999543 | Ortholog | 21/37 | 3/88 |
31 | eriEur1-169 | Erinaceus europaeus | cin-miR-200 | 21/22 | scaffold_348240 | + | 51-72 | N/A | 0.999689 | Ortholog | 21/37 | 3/88 |
32 | eriEur1-169 | Erinaceus europaeus | bta-miR-200b | 21/21 | scaffold_348240 | + | 51-71 | N/A | 0.99972 | Ortholog | 21/37 | 3/88 |
33 | eriEur1-169 | Erinaceus europaeus | rno-miR-200b | 23/23 | scaffold_348240 | + | 50-72 | N/A | 0.999528 | Ortholog | 21/37 | 3/88 |
34 | eriEur1-171 | Erinaceus europaeus | mmu-miR-200a | 22/22 | scaffold_348240 | + | 51-72 | N/A | 0.999955 | Ortholog | 21/37 | 3/88 |
35 | eriEur1-171 | Erinaceus europaeus | cfa-miR-200a | 22/22 | scaffold_348240 | + | 15-36 | N/A | 0.998602 | Ortholog | 21/37 | 3/88 |
36 | eriEur1-171 | Erinaceus europaeus | bta-miR-200a | 23/23 | scaffold_348240 | + | 50-72 | N/A | 0.999968 | Ortholog | 21/37 | 3/88 |
37 | eriEur1-243 | Erinaceus europaeus | hsa-miR-200c* | 22/22 | scaffold_362341 | + | 11-32 | N/A | 0.999582 | Ortholog | 21/37 | 3/88 |
38 | felCat3-20 | Felis catus | rno-miR-200b | 23/23 | scaffold_124042 | + | 50-72 | 282244-282348 | 0.869119 | Ortholog | 21/37 | 3/88 |
39 | felCat3-20 | Felis catus | bta-miR-200b | 21/21 | scaffold_124042 | + | 51-71 | 282243-282349 | 0.897027 | Ortholog | 21/37 | 3/88 |
40 | felCat3-20 | Felis catus | bfl-miR-200a | 20/22 | scaffold_124042 | + | 52-71 | 282243-282349 | 0.903526 | Ortholog | 21/37 | 3/88 |
41 | felCat3-20 | Felis catus | cin-miR-200 | 21/22 | scaffold_124042 | + | 51-72 | 282243-282349 | 0.917299 | Ortholog | 21/37 | 3/88 |
42 | felCat3-22 | Felis catus | mmu-miR-200a | 22/22 | scaffold_124042 | + | 50-71 | 282950-283028 | 0.999921 | Ortholog | 21/37 | 3/88 |
43 | felCat3-22 | Felis catus | cfa-miR-200a | 22/22 | scaffold_124042 | + | 12-33 | 282950-283028 | 0.997409 | Ortholog | 21/37 | 3/88 |
44 | felCat3-22 | Felis catus | bta-miR-200a | 23/23 | scaffold_124042 | + | 49-71 | 282950-283026 | 0.999801 | Ortholog | 21/37 | 3/88 |
45 | felCat3-50 | Felis catus | hsa-miR-200c* | 22/22 | scaffold_137391 | + | 51-72 | 88318-88415 | 0.97179 | Ortholog | 21/37 | 3/88 |
46 | gasAcu1-452 | Gasterosteus aculeatus | bta-miR-200b | 21/21 | chrXII | + | 51-71 | 5709229-5709312 | 0.99969 | Ortholog | 21/37 | 2/88 |
47 | gasAcu1-452 | Gasterosteus aculeatus | gga-miR-200b | 23/23 | chrXII | + | 50-72 | 5709230-5709311 | 0.999776 | Ortholog | 21/37 | 2/88 |
48 | gasAcu1-452 | Gasterosteus aculeatus | cin-miR-200 | 21/22 | chrXII | + | 51-72 | 5709229-5709312 | 0.999686 | Ortholog | 21/37 | 2/88 |
49 | gasAcu1-452 | Gasterosteus aculeatus | bfl-miR-200a | 20/22 | chrXII | + | 52-71 | 5709229-5709312 | 0.99951 | Ortholog | 21/37 | 2/88 |
50 | gasAcu1-454 | Gasterosteus aculeatus | bta-miR-200a | 23/23 | chrXII | + | 50-72 | 5709466-5709546 | 0.999819 | Ortholog | 21/37 | 2/88 |
51 | gasAcu1-454 | Gasterosteus aculeatus | mmu-miR-200a | 22/22 | chrXII | + | 51-72 | 5709465-5709547 | 0.999789 | Ortholog | 21/37 | 2/88 |
52 | gasAcu1-454 | Gasterosteus aculeatus | mdo-miR-200a* | 20/22 | chrXII | + | 10-31 | 5709467-5709544 | 0.992918 | Ortholog | 21/37 | 2/88 |
53 | loxAfr1-275 | Loxodonta africana | hsa-miR-200c | 23/23 | scaffold_4871 | + | 49-71 | N/A | 0.999541 | Ortholog | 21/37 | 1/88 |
54 | loxAfr1-275 | Loxodonta africana | rno-miR-200c | 22/22 | scaffold_4871 | + | 51-72 | N/A | 0.999814 | Ortholog | 21/37 | 1/88 |
55 | loxAfr1-275 | Loxodonta africana | mml-miR-200c | 22/22 | scaffold_4871 | + | 51-72 | N/A | 0.997813 | Ortholog | 21/37 | 1/88 |
56 | oryCun1-186 | Oryctolagus cuniculus | hsa-miR-200c* | 22/22 | scaffold_181394 | + | 50-71 | N/A | 0.997698 | Ortholog | 21/37 | 3/88 |
57 | oryCun1-528 | Oryctolagus cuniculus | mdo-miR-200a* | 21/22 | scaffold_61710 | - | 14-35 | N/A | 0.999472 | Ortholog | 21/37 | 3/88 |
58 | oryCun1-528 | Oryctolagus cuniculus | bfl-miR-200c | 20/21 | scaffold_61710 | - | 50-70 | N/A | 0.999872 | Ortholog | 21/37 | 3/88 |
59 | oryCun1-531 | Oryctolagus cuniculus | cfa-miR-200b | 22/22 | scaffold_61710 | - | 17-38 | N/A | 0.999703 | Ortholog | 21/37 | 3/88 |
60 | oryCun1-531 | Oryctolagus cuniculus | bfl-miR-200a | 20/22 | scaffold_61710 | - | 50-69 | N/A | 0.999909 | Ortholog | 21/37 | 3/88 |
61 | oryCun1-531 | Oryctolagus cuniculus | cin-miR-200 | 20/22 | scaffold_61710 | - | 50-70 | N/A | 0.999965 | Ortholog | 21/37 | 3/88 |
62 | oryCun1-531 | Oryctolagus cuniculus | rno-miR-200c | 21/22 | scaffold_61710 | - | 49-70 | N/A | 0.999923 | Ortholog | 21/37 | 3/88 |
63 | oryCun1-531 | Oryctolagus cuniculus | oan-miR-200b* | 21/21 | scaffold_61710 | - | 17-37 | N/A | 0.999506 | Ortholog | 21/37 | 3/88 |
64 | oryCun1-531 | Oryctolagus cuniculus | mml-miR-200c | 20/22 | scaffold_61710 | - | 50-70 | N/A | 0.999866 | Ortholog | 21/37 | 3/88 |
65 | oryLat2-367 | Oryzias latipes | cfa-miR-200a | 20/22 | chr7 | - | 13-34 | 217700-217783 | 0.998386 | Ortholog | 21/37 | 2/88 |
66 | oryLat2-367 | Oryzias latipes | bfl-miR-200c | 20/21 | chr7 | - | 50-70 | 217702-217781 | 0.999184 | Ortholog | 21/37 | 2/88 |
67 | oryLat2-369 | Oryzias latipes | bfl-miR-200c | 19/21 | chr7 | - | 50-70 | 217992-218070 | 0.992563 | Ortholog | 21/37 | 2/88 |
68 | oryLat2-369 | Oryzias latipes | cfa-miR-200b | 20/22 | chr7 | - | 21-42 | 217987-218078 | 0.929574 | Ortholog | 21/37 | 2/88 |
69 | otoGar1-104 | Otolemur garnettii | bta-miR-200a | 23/23 | scaffold_112009.1-54710 | - | 49-71 | N/A | 0.999965 | Ortholog | 21/37 | 2/88 |
70 | otoGar1-104 | Otolemur garnettii | mmu-miR-200a | 22/22 | scaffold_112009.1-54710 | - | 49-70 | N/A | 0.999955 | Ortholog | 21/37 | 2/88 |
71 | otoGar1-104 | Otolemur garnettii | cfa-miR-200a | 22/22 | scaffold_112009.1-54710 | - | 13-34 | N/A | 0.998894 | Ortholog | 21/37 | 2/88 |
72 | otoGar1-462 | Otolemur garnettii | hsa-miR-200c* | 22/22 | scaffold_9419.1-70535 | - | 12-33 | N/A | 0.999551 | Ortholog | 21/37 | 2/88 |
73 | ponAbe2-129 | Pongo abelii | hsa-miR-200c* | 22/22 | chr12 | + | 11-32 | 7199693-7199772 | 0.999552 | Ortholog | 21/37 | 3/88 |
74 | ponAbe2-129 | Pongo abelii | hsa-miR-200c | 23/23 | chr12 | + | 50-72 | 7199693-7199772 | 0.99994 | Ortholog | 21/37 | 3/88 |
75 | ponAbe2-129 | Pongo abelii | rno-miR-200c | 22/22 | chr12 | + | 51-72 | 7199692-7199773 | 0.999955 | Ortholog | 21/37 | 3/88 |
76 | ponAbe2-129 | Pongo abelii | mml-miR-200c | 22/22 | chr12 | + | 51-72 | 7199693-7199772 | 0.999886 | Ortholog | 21/37 | 3/88 |
77 | ponAbe2-478 | Pongo abelii | cfa-miR-200b | 22/22 | chr1_random | + | 14-35 | 34389707-34389788 | 0.999515 | Ortholog | 21/37 | 3/88 |
78 | ponAbe2-478 | Pongo abelii | oan-miR-200b* | 21/21 | chr1_random | + | 14-34 | 34389707-34389788 | 0.999227 | Ortholog | 21/37 | 3/88 |
79 | ponAbe2-478 | Pongo abelii | bfl-miR-200a | 20/22 | chr1_random | + | 52-71 | 34389706-34389790 | 0.999924 | Ortholog | 21/37 | 3/88 |
80 | ponAbe2-478 | Pongo abelii | bta-miR-200b | 21/21 | chr1_random | + | 51-71 | 34389706-34389790 | 0.999951 | Ortholog | 21/37 | 3/88 |
81 | ponAbe2-478 | Pongo abelii | cin-miR-200 | 21/22 | chr1_random | + | 51-72 | 34389706-34389790 | 0.999949 | Ortholog | 21/37 | 3/88 |
82 | ponAbe2-478 | Pongo abelii | rno-miR-200b | 23/23 | chr1_random | + | 50-72 | 34389707-34389788 | 0.999927 | Ortholog | 21/37 | 3/88 |
83 | ponAbe2-69 | Pongo abelii | cfa-miR-200a | 22/22 | chr1 | - | 14-35 | 229422413-229422497 | 0.998103 | Ortholog | 21/37 | 3/88 |
84 | ponAbe2-69 | Pongo abelii | mmu-miR-200a | 22/22 | chr1 | - | 49-70 | 229422416-229422494 | 0.999953 | Ortholog | 21/37 | 3/88 |
85 | ponAbe2-69 | Pongo abelii | bta-miR-200a | 23/23 | chr1 | - | 49-71 | 229422416-229422494 | 0.999964 | Ortholog | 21/37 | 3/88 |
86 | sorAra1-15 | Sorex araneus | cfa-miR-200a | 22/22 | scaffold_141740 | - | 15-36 | N/A | 0.999352 | Ortholog | 21/37 | 1/88 |
87 | sorAra1-15 | Sorex araneus | bta-miR-200a | 23/23 | scaffold_141740 | - | 49-71 | N/A | 0.999977 | Ortholog | 21/37 | 1/88 |
88 | sorAra1-15 | Sorex araneus | mmu-miR-200a | 22/22 | scaffold_141740 | - | 49-70 | N/A | 0.999969 | Ortholog | 21/37 | 1/88 |
89 | taeGut1-196 | Taeniopygia guttata | oan-miR-200b* | 21/21 | chr21 | + | 14-34 | 5892886-5892968 | 0.99551 | Ortholog | 21/37 | 2/88 |
90 | taeGut1-196 | Taeniopygia guttata | bfl-miR-200a | 20/22 | chr21 | + | 52-71 | 5892886-5892970 | 0.999555 | Ortholog | 21/37 | 2/88 |
91 | taeGut1-196 | Taeniopygia guttata | bta-miR-200b | 21/21 | chr21 | + | 51-71 | 5892886-5892970 | 0.999706 | Ortholog | 21/37 | 2/88 |
92 | taeGut1-196 | Taeniopygia guttata | cin-miR-200 | 21/22 | chr21 | + | 51-72 | 5892886-5892970 | 0.99971 | Ortholog | 21/37 | 2/88 |
93 | taeGut1-196 | Taeniopygia guttata | gga-miR-200b | 23/23 | chr21 | + | 49-71 | 5892888-5892968 | 0.999796 | Ortholog | 21/37 | 2/88 |
94 | taeGut1-198 | Taeniopygia guttata | mmu-miR-200a | 22/22 | chr21 | + | 51-72 | 5894318-5894398 | 0.999382 | Ortholog | 21/37 | 2/88 |
95 | taeGut1-198 | Taeniopygia guttata | mdo-miR-200a* | 22/22 | chr21 | + | 15-36 | 5894316-5894399 | 0.998251 | Ortholog | 21/37 | 2/88 |
96 | taeGut1-198 | Taeniopygia guttata | bta-miR-200a | 23/23 | chr21 | + | 50-72 | 5894319-5894397 | 0.999221 | Ortholog | 21/37 | 2/88 |
97 | tupBel1-441 | Tupaia belangeri | bta-miR-200b | 21/21 | scaffold_13732.1-8110 | - | 50-70 | N/A | 0.999982 | Ortholog | 21/37 | 3/88 |
98 | tupBel1-441 | Tupaia belangeri | cin-miR-200 | 21/22 | scaffold_13732.1-8110 | - | 49-70 | N/A | 0.999973 | Ortholog | 21/37 | 3/88 |
99 | tupBel1-441 | Tupaia belangeri | rno-miR-200b | 23/23 | scaffold_13732.1-8110 | - | 49-71 | N/A | 0.999965 | Ortholog | 21/37 | 3/88 |
100 | tupBel1-441 | Tupaia belangeri | cfa-miR-200b | 22/22 | scaffold_13732.1-8110 | - | 16-37 | N/A | 0.999878 | Ortholog | 21/37 | 3/88 |
101 | tupBel1-441 | Tupaia belangeri | bfl-miR-200a | 20/22 | scaffold_13732.1-8110 | - | 50-69 | N/A | 0.999962 | Ortholog | 21/37 | 3/88 |
102 | tupBel1-441 | Tupaia belangeri | oan-miR-200b* | 21/21 | scaffold_13732.1-8110 | - | 16-36 | N/A | 0.999795 | Ortholog | 21/37 | 3/88 |
103 | tupBel1-542 | Tupaia belangeri | cfa-miR-200a | 22/22 | scaffold_142375.1-90397 | - | 15-36 | N/A | 0.999556 | Ortholog | 21/37 | 3/88 |
104 | tupBel1-542 | Tupaia belangeri | mmu-miR-200a | 22/22 | scaffold_142375.1-90397 | - | 49-70 | N/A | 0.999981 | Ortholog | 21/37 | 3/88 |
105 | tupBel1-542 | Tupaia belangeri | bta-miR-200a | 23/23 | scaffold_142375.1-90397 | - | 49-71 | N/A | 0.999986 | Ortholog | 21/37 | 3/88 |
106 | tupBel1-545 | Tupaia belangeri | bfl-miR-200a | 20/22 | scaffold_142375.1-90397 | - | 49-68 | N/A | 0.999778 | Ortholog | 21/37 | 3/88 |
107 | tupBel1-545 | Tupaia belangeri | cin-miR-200 | 21/22 | scaffold_142375.1-90397 | - | 48-69 | N/A | 0.99985 | Ortholog | 21/37 | 3/88 |
108 | tupBel1-545 | Tupaia belangeri | oan-miR-200b* | 21/21 | scaffold_142375.1-90397 | - | 16-36 | N/A | 0.99969 | Ortholog | 21/37 | 3/88 |
109 | tupBel1-545 | Tupaia belangeri | bta-miR-200b | 21/21 | scaffold_142375.1-90397 | - | 50-70 | N/A | 0.999973 | Ortholog | 21/37 | 3/88 |
110 | tupBel1-545 | Tupaia belangeri | rno-miR-200b | 23/23 | scaffold_142375.1-90397 | - | 48-70 | N/A | 0.999789 | Ortholog | 21/37 | 3/88 |
111 | tupBel1-545 | Tupaia belangeri | cfa-miR-200b | 22/22 | scaffold_142375.1-90397 | - | 16-37 | N/A | 0.999817 | Ortholog | 21/37 | 3/88 |
Total | 111 record(s). |