- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | braFlo1-127 | Branchiostoma floridae | spu-miR-200 | 22/23 | chrUn | - | 49-71 | 318449263-318449341 | 0.999953 | Paralog | 21/37 | 6/88 |
2 | braFlo1-127 | Branchiostoma floridae | mmu-miR-200a | 20/22 | chrUn | - | 49-70 | 318449263-318449341 | 0.999956 | Paralog | 21/37 | 6/88 |
3 | braFlo1-128 | Branchiostoma floridae | bfl-miR-200c | 21/21 | chrUn | - | 50-70 | 318452053-318452137 | 0.999974 | Paralog | 21/37 | 6/88 |
4 | braFlo1-130 | Branchiostoma floridae | bfl-miR-200a | 22/22 | chrUn | - | 49-70 | 318454800-318454876 | 0.854558 | Paralog | 21/37 | 6/88 |
5 | ci2-13 | Ciona intestinalis | cin-miR-200 | 22/22 | scaffold_71 | + | 51-72 | 128173-128263 | 0.999782 | Paralog | 21/37 | 3/88 |
6 | ci2-14 | Ciona intestinalis | mmu-miR-200a | 20/22 | scaffold_71 | + | 50-70 | 128537-128622 | 0.99692 | Paralog | 21/37 | 3/88 |
7 | fr2-303 | Fugu rubripes | mdo-miR-200a* | 20/22 | chrUn | - | 8-29 | 214534032-214534105 | 0.973313 | Paralog | 21/37 | 3/88 |
8 | fr2-303 | Fugu rubripes | bta-miR-200a | 23/23 | chrUn | - | 47-69 | 214534032-214534105 | 0.999546 | Paralog | 21/37 | 3/88 |
9 | fr2-303 | Fugu rubripes | fru-miR-200a | 22/22 | chrUn | - | 47-68 | 214534032-214534105 | 0.99933 | Paralog | 21/37 | 3/88 |
10 | monDom4-305 | Monodelphis domestica | bta-miR-200b | 21/21 | chr4 | + | 51-71 | 380889557-380889639 | 0.996919 | Paralog | 21/37 | 6/88 |
11 | monDom4-305 | Monodelphis domestica | bfl-miR-200a | 20/22 | chr4 | + | 52-71 | 380889557-380889639 | 0.995538 | Paralog | 21/37 | 6/88 |
12 | monDom4-305 | Monodelphis domestica | cin-miR-200 | 21/22 | chr4 | + | 51-72 | 380889557-380889639 | 0.997248 | Paralog | 21/37 | 6/88 |
13 | monDom4-306 | Monodelphis domestica | mdo-miR-200a | 22/22 | chr4 | + | 51-72 | 380892220-380892306 | 0.99985 | Paralog | 21/37 | 6/88 |
14 | monDom4-306 | Monodelphis domestica | mdo-miR-200a* | 22/22 | chr4 | + | 11-32 | 380892223-380892300 | 0.999463 | Paralog | 21/37 | 6/88 |
15 | monDom4-306 | Monodelphis domestica | bta-miR-200a | 23/23 | chr4 | + | 50-72 | 380892221-380892305 | 0.999813 | Paralog | 21/37 | 6/88 |
16 | monDom4-429 | Monodelphis domestica | mml-miR-200c | 22/22 | chr8 | + | 49-70 | 104400255-104400328 | 0.999279 | Paralog | 21/37 | 6/88 |
17 | monDom4-429 | Monodelphis domestica | mdo-miR-200c | 22/22 | chr8 | + | 51-72 | 104400252-104400331 | 0.999881 | Paralog | 21/37 | 6/88 |
18 | monDom4-429 | Monodelphis domestica | hsa-miR-200c | 23/23 | chr8 | + | 48-70 | 104400255-104400328 | 0.999673 | Paralog | 21/37 | 6/88 |
19 | strPur2-106 | Strongylocentrotus purpuratus | spu-miR-200 | 23/23 | Scaffold79422 | + | 49-71 | 178150-178226 | 0.997863 | Paralog | 21/37 | 2/88 |
Total | 19 record(s). |