- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | cap-mir-2001 | Capitella sp. | cap-miR-2001 | 23/23 | scaffold_296 | + | 14-36 | N/A | - | miRBase_13_0 | 5/6 | 1/7 |
2 | isc-mir-2001 | Ixodes scapularis | isc-miR-2001 | 23/23 | N/A | N/A | 12-34 | N/A | - | miRBase_13_0 | 5/6 | 1/7 |
3 | lgi-mir-2001 | Lottia gigantea | lgi-miR-2001 | 23/23 | sca_150 | - | 12-34 | N/A | - | miRBase_13_0 | 5/6 | 1/7 |
4 | rn4-106 | Rattus norvegicus | isc-miR-2001 | 21/23 | chr14 | - | 7-29 | 17145624-17145698 | 0.957039 | Ortholog | 5/6 | 1/7 |
5 | sko-mir-2001 | Saccoglossus kowalevskii | sko-miR-2001 | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 5/6 | 1/7 |
6 | spu-mir-2001 | Strongylocentrotus purpuratus | spu-miR-2001 | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 5/6 | 2/7 |
7 | strPur2-47 | Strongylocentrotus purpuratus | cap-miR-2001 | 21/23 | Scaffold41617 | + | 14-35 | 105270-105352 | 0.979351 | Paralog | 5/6 | 2/7 |
8 | strPur2-47 | Strongylocentrotus purpuratus | sko-miR-2001 | 20/22 | Scaffold41617 | + | 14-34 | 105270-105352 | 0.987938 | Paralog | 5/6 | 2/7 |
9 | strPur2-47 | Strongylocentrotus purpuratus | spu-miR-2001 | 22/22 | Scaffold41617 | + | 12-33 | 105271-105351 | 0.990637 | Paralog | 5/6 | 2/7 |
Total | 9 record(s). |