- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-155 | Anolis carolinensis | mmu-miR-202-5p | 21/21 | scaffold_24 | - | 15-35 | 2326375-2326459 | 0.997485 | Ortholog | 10/23 | 1/30 |
2 | bta-mir-202 | Bos taurus | bta-miR-202 | 21/21 | chr26 | - | 19-39 | N/A | - | miRBase_13_0 | 10/23 | 1/30 |
3 | calJac1-649 | Callithrix jacchus | hsa-miR-202 | 20/20 | Contig9046 | - | 50-69 | 36141-36222 | 0.999406 | Ortholog | 10/23 | 1/30 |
4 | calJac1-649 | Callithrix jacchus | dre-miR-202* | 21/22 | Contig9046 | - | 16-37 | 36139-36224 | 0.999973 | Ortholog | 10/23 | 1/30 |
5 | calJac1-649 | Callithrix jacchus | mmu-miR-202-3p | 21/22 | Contig9046 | - | 49-70 | 36142-36221 | 0.999157 | Ortholog | 10/23 | 1/30 |
6 | calJac1-649 | Callithrix jacchus | xtr-miR-202* | 20/22 | Contig9046 | - | 16-36 | 36139-36224 | 0.999949 | Ortholog | 10/23 | 1/30 |
7 | cfa-mir-202 | Canis familiaris | cfa-miR-202 | 22/22 | chr28 | - | 9-30 | N/A | - | miRBase_13_0 | 10/23 | 1/30 |
8 | cavPor3-157 | Cavia porcellus | hsa-miR-202 | 19/20 | scaffold_12 | + | 52-71 | 13217466-13217546 | 0.883275 | Ortholog | 10/23 | 2/30 |
9 | cavPor3-18 | Cavia porcellus | dre-miR-202* | 21/22 | scaffold_1 | + | 18-39 | 34864174-34864259 | 0.999927 | Ortholog | 10/23 | 2/30 |
10 | cavPor3-18 | Cavia porcellus | mmu-miR-202-5p | 21/21 | scaffold_1 | + | 18-38 | 34864174-34864259 | 0.99987 | Ortholog | 10/23 | 2/30 |
11 | cavPor3-18 | Cavia porcellus | xtr-miR-202* | 21/22 | scaffold_1 | + | 17-38 | 34864174-34864259 | 0.999825 | Ortholog | 10/23 | 2/30 |
12 | cavPor3-18 | Cavia porcellus | dre-miR-202 | 20/22 | scaffold_1 | + | 51-72 | 34864177-34864260 | 0.999591 | Ortholog | 10/23 | 2/30 |
13 | cavPor3-18 | Cavia porcellus | hsa-miR-202 | 19/20 | scaffold_1 | + | 51-70 | 34864177-34864260 | 0.999591 | Ortholog | 10/23 | 2/30 |
14 | dre-mir-202 | Danio rerio | dre-miR-202* | 22/22 | chr13 | - | 11-32 | N/A | - | miRBase_13_0 | 10/23 | 1/30 |
15 | dre-mir-202 | Danio rerio | dre-miR-202 | 22/22 | chr13 | - | 47-68 | N/A | - | miRBase_13_0 | 10/23 | 1/30 |
16 | dp4-50 | Drosophila pseudoobscura | xtr-miR-202 | 20/22 | chr4_group1 | + | 18-39 | N/A | 0.880937 | Ortholog | 10/23 | 1/30 |
17 | echTel1-100 | Echinops telfari | mmu-miR-202-5p | 21/21 | scaffold_239898 | - | 14-34 | N/A | 0.999779 | Ortholog | 10/23 | 1/30 |
18 | echTel1-100 | Echinops telfari | dre-miR-202* | 21/22 | scaffold_239898 | - | 14-35 | N/A | 0.999865 | Ortholog | 10/23 | 1/30 |
19 | echTel1-100 | Echinops telfari | xtr-miR-202* | 21/22 | scaffold_239898 | - | 13-34 | N/A | 0.999701 | Ortholog | 10/23 | 1/30 |
20 | equCab1-757 | Equus caballus | xtr-miR-202* | 20/22 | chrUn | - | 15-35 | 300137413-300137495 | 0.999936 | Ortholog | 10/23 | 1/30 |
21 | equCab1-757 | Equus caballus | dre-miR-202* | 21/22 | chrUn | - | 18-39 | 300137410-300137498 | 0.999965 | Ortholog | 10/23 | 1/30 |
22 | fr2-230 | Fugu rubripes | hsa-miR-202 | 19/20 | chrUn | - | 50-69 | 116515594-116515676 | 0.930979 | Paralog | 10/23 | 2/30 |
23 | fr2-230 | Fugu rubripes | xtr-miR-202 | 21/22 | chrUn | - | 49-70 | 116515595-116515675 | 0.949738 | Paralog | 10/23 | 2/30 |
24 | fr2-230 | Fugu rubripes | dre-miR-202* | 20/22 | chrUn | - | 15-35 | 116515593-116515677 | 0.996816 | Paralog | 10/23 | 2/30 |
25 | fr2-230 | Fugu rubripes | xtr-miR-202* | 21/22 | chrUn | - | 14-35 | 116515593-116515677 | 0.995677 | Paralog | 10/23 | 2/30 |
26 | fru-mir-202 | Fugu rubripes | fru-miR-202 | 22/22 | scaffold_52 | - | 43-64 | N/A | - | miRBase_13_0 | 10/23 | 2/30 |
27 | gga-mir-202 | Gallus gallus | gga-miR-202 | 22/22 | chr6 | + | 52-73 | N/A | - | miRBase_13_0 | 10/23 | 1/30 |
28 | gga-mir-202 | Gallus gallus | gga-miR-202* | 22/22 | chr6 | + | 15-36 | N/A | - | miRBase_13_0 | 10/23 | 1/30 |
29 | gasAcu1-311 | Gasterosteus aculeatus | xtr-miR-202 | 20/22 | chrVI | - | 49-70 | 2032079-2032159 | 0.996955 | Ortholog | 10/23 | 1/30 |
30 | gasAcu1-311 | Gasterosteus aculeatus | xtr-miR-202* | 21/22 | chrVI | - | 14-35 | 2032077-2032161 | 0.999431 | Ortholog | 10/23 | 1/30 |
31 | gasAcu1-311 | Gasterosteus aculeatus | dre-miR-202* | 20/22 | chrVI | - | 15-35 | 2032077-2032161 | 0.999635 | Ortholog | 10/23 | 1/30 |
32 | gasAcu1-311 | Gasterosteus aculeatus | hsa-miR-202 | 20/20 | chrVI | - | 50-69 | 2032078-2032160 | 0.996345 | Ortholog | 10/23 | 1/30 |
33 | hg18-60 | Homo sapiens | dre-miR-202 | 20/22 | chr14 | - | 24-44 | 44734407-44734500 | 0.855083 | Paralog | 10/23 | 2/30 |
34 | hsa-mir-202 | Homo sapiens | hsa-miR-202* | 22/22 | chr10 | - | 28-49 | 134911006-134911115 | - | miRBase_13_0 | 10/23 | 2/30 |
35 | hsa-mir-202 | Homo sapiens | hsa-miR-202 | 20/20 | chr10 | - | 64-83 | 134911006-134911115 | - | miRBase_13_0 | 10/23 | 2/30 |
36 | loxAfr1-310 | Loxodonta africana | hsa-miR-202 | 20/20 | scaffold_57664 | - | 50-69 | N/A | 0.999377 | Ortholog | 10/23 | 1/30 |
37 | loxAfr1-310 | Loxodonta africana | xtr-miR-202* | 21/22 | scaffold_57664 | - | 16-37 | N/A | 0.999914 | Ortholog | 10/23 | 1/30 |
38 | loxAfr1-310 | Loxodonta africana | dre-miR-202* | 21/22 | scaffold_57664 | - | 20-41 | N/A | 0.999967 | Ortholog | 10/23 | 1/30 |
39 | loxAfr1-310 | Loxodonta africana | dre-miR-202 | 21/22 | scaffold_57664 | - | 49-70 | N/A | 0.999508 | Ortholog | 10/23 | 1/30 |
40 | loxAfr1-310 | Loxodonta africana | mmu-miR-202-5p | 21/21 | scaffold_57664 | - | 17-37 | N/A | 0.999939 | Ortholog | 10/23 | 1/30 |
41 | mmu-mir-202 | Mus musculus | mmu-miR-202-3p | 22/22 | chr7 | - | 45-66 | N/A | - | miRBase_13_0 | 10/23 | 1/30 |
42 | mmu-mir-202 | Mus musculus | mmu-miR-202-5p | 21/21 | chr7 | - | 9-29 | N/A | - | miRBase_13_0 | 10/23 | 1/30 |
43 | oryLat2-142 | Oryzias latipes | xtr-miR-202* | 21/22 | chr15 | - | 14-35 | 1382675-1382759 | 0.996353 | Ortholog | 10/23 | 1/30 |
44 | oryLat2-142 | Oryzias latipes | dre-miR-202* | 21/22 | chr15 | - | 17-38 | 1382674-1382761 | 0.997988 | Ortholog | 10/23 | 1/30 |
45 | oryLat2-142 | Oryzias latipes | mmu-miR-202-5p | 21/21 | chr15 | - | 15-35 | 1382675-1382759 | 0.996944 | Ortholog | 10/23 | 1/30 |
46 | oryLat2-142 | Oryzias latipes | xtr-miR-202 | 20/22 | chr15 | - | 49-70 | 1382677-1382757 | 0.957283 | Ortholog | 10/23 | 1/30 |
47 | otoGar1-209 | Otolemur garnettii | xtr-miR-202* | 21/22 | scaffold_117413.1-84420 | + | 10-31 | N/A | 0.999735 | Ortholog | 10/23 | 1/30 |
48 | otoGar1-209 | Otolemur garnettii | dre-miR-202* | 21/22 | scaffold_117413.1-84420 | + | 11-32 | N/A | 0.999882 | Ortholog | 10/23 | 1/30 |
49 | otoGar1-209 | Otolemur garnettii | hsa-miR-202 | 20/20 | scaffold_117413.1-84420 | + | 53-72 | N/A | 0.998635 | Ortholog | 10/23 | 1/30 |
50 | otoGar1-209 | Otolemur garnettii | dre-miR-202 | 21/22 | scaffold_117413.1-84420 | + | 50-71 | N/A | 0.999557 | Ortholog | 10/23 | 1/30 |
51 | otoGar1-209 | Otolemur garnettii | mmu-miR-202-5p | 21/21 | scaffold_117413.1-84420 | + | 11-31 | N/A | 0.999803 | Ortholog | 10/23 | 1/30 |
52 | ptr-mir-202 | Pan troglodytes | ptr-miR-202 | 20/20 | chr10 | - | 64-83 | N/A | - | miRBase_13_0 | 10/23 | 1/30 |
53 | ponAbe2-248 | Pongo abelii | gga-miR-202 | 20/22 | chr14 | - | 24-44 | 45437189-45437282 | 0.819769 | Ortholog | 10/23 | 2/30 |
54 | ponAbe2-89 | Pongo abelii | hsa-miR-202 | 20/20 | chr10 | - | 50-69 | 132960293-132960375 | 0.9991 | Ortholog | 10/23 | 2/30 |
55 | ponAbe2-89 | Pongo abelii | dre-miR-202 | 21/22 | chr10 | - | 49-70 | 132960294-132960374 | 0.999089 | Ortholog | 10/23 | 2/30 |
56 | ponAbe2-89 | Pongo abelii | mmu-miR-202-5p | 21/21 | chr10 | - | 15-35 | 132960292-132960376 | 0.999926 | Ortholog | 10/23 | 2/30 |
57 | ponAbe2-89 | Pongo abelii | dre-miR-202* | 21/22 | chr10 | - | 16-37 | 132960291-132960377 | 0.999961 | Ortholog | 10/23 | 2/30 |
58 | ponAbe2-89 | Pongo abelii | xtr-miR-202* | 21/22 | chr10 | - | 14-35 | 132960292-132960376 | 0.999899 | Ortholog | 10/23 | 2/30 |
59 | rn4-40 | Rattus norvegicus | xtr-miR-202* | 21/22 | chr1 | - | 19-40 | 199758123-199758212 | 0.99984 | Ortholog | 10/23 | 1/30 |
60 | rn4-40 | Rattus norvegicus | dre-miR-202* | 21/22 | chr1 | - | 22-43 | 199758122-199758214 | 0.999933 | Ortholog | 10/23 | 1/30 |
61 | rn4-40 | Rattus norvegicus | gga-miR-202 | 20/22 | chr1 | - | 48-69 | 199758130-199758204 | 0.995873 | Ortholog | 10/23 | 1/30 |
62 | rn4-40 | Rattus norvegicus | hsa-miR-202 | 19/20 | chr1 | - | 50-69 | 199758126-199758206 | 0.998672 | Ortholog | 10/23 | 1/30 |
63 | rn4-40 | Rattus norvegicus | mmu-miR-202-5p | 21/21 | chr1 | - | 20-40 | 199758123-199758212 | 0.999884 | Ortholog | 10/23 | 1/30 |
64 | taeGut1-238 | Taeniopygia guttata | dre-miR-202* | 20/22 | chr3 | + | 26-47 | 84246062-84246156 | 0.890072 | Ortholog | 10/23 | 3/30 |
65 | taeGut1-294 | Taeniopygia guttata | xtr-miR-202 | 20/22 | chr6 | + | 51-72 | 20496792-20496876 | 0.999365 | Ortholog | 10/23 | 3/30 |
66 | taeGut1-294 | Taeniopygia guttata | mmu-miR-202-5p | 21/21 | chr6 | + | 14-34 | 20496793-20496875 | 0.99989 | Ortholog | 10/23 | 3/30 |
67 | taeGut1-294 | Taeniopygia guttata | hsa-miR-202 | 20/20 | chr6 | + | 52-71 | 20496791-20496878 | 0.998927 | Ortholog | 10/23 | 3/30 |
68 | taeGut1-294 | Taeniopygia guttata | dre-miR-202* | 21/22 | chr6 | + | 14-35 | 20496793-20496875 | 0.999939 | Ortholog | 10/23 | 3/30 |
69 | taeGut1-294 | Taeniopygia guttata | xtr-miR-202* | 21/22 | chr6 | + | 13-34 | 20496793-20496874 | 0.999849 | Ortholog | 10/23 | 3/30 |
70 | taeGut1-359 | Taeniopygia guttata | mmu-miR-202-5p | 21/21 | chrUn | - | 15-35 | 49162033-49162117 | 0.999895 | Ortholog | 10/23 | 3/30 |
71 | taeGut1-359 | Taeniopygia guttata | hsa-miR-202 | 20/20 | chrUn | - | 50-69 | 49162034-49162116 | 0.998776 | Ortholog | 10/23 | 3/30 |
72 | taeGut1-359 | Taeniopygia guttata | xtr-miR-202* | 21/22 | chrUn | - | 14-35 | 49162033-49162117 | 0.999857 | Ortholog | 10/23 | 3/30 |
73 | taeGut1-359 | Taeniopygia guttata | xtr-miR-202 | 20/22 | chrUn | - | 49-70 | 49162035-49162115 | 0.999044 | Ortholog | 10/23 | 3/30 |
74 | taeGut1-359 | Taeniopygia guttata | dre-miR-202* | 21/22 | chrUn | - | 15-36 | 49162033-49162117 | 0.999941 | Ortholog | 10/23 | 3/30 |
75 | tni-mir-202 | Tetraodon nigroviridis | tni-miR-202 | 22/22 | chrUn_random | + | 43-64 | N/A | - | miRBase_13_0 | 10/23 | 1/30 |
76 | xtr-mir-202-1 | Xenopus tropicalis | xtr-miR-202 | 22/22 | scaffold_266 | - | 51-72 | N/A | - | miRBase_13_0 | 10/23 | 2/30 |
77 | xtr-mir-202-1 | Xenopus tropicalis | xtr-miR-202* | 22/22 | scaffold_266 | - | 14-35 | N/A | - | miRBase_13_0 | 10/23 | 2/30 |
78 | xtr-mir-202-2 | Xenopus tropicalis | xtr-miR-202 | 22/22 | scaffold_266 | - | 51-72 | N/A | - | miRBase_13_0 | 10/23 | 2/30 |
79 | xtr-mir-202-2 | Xenopus tropicalis | xtr-miR-202* | 22/22 | scaffold_266 | - | 14-35 | N/A | - | miRBase_13_0 | 10/23 | 2/30 |
Total | 79 record(s). |