- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-637 | Callithrix jacchus | gga-miR-203 | 20/22 | Contig7903 | - | 49-68 | 107925-108002 | 0.999885 | Ortholog | 12/21 | 1/25 |
2 | calJac1-637 | Callithrix jacchus | mmu-miR-203* | 21/22 | Contig7903 | - | 14-35 | 107922-108005 | 0.999948 | Ortholog | 12/21 | 1/25 |
3 | calJac1-637 | Callithrix jacchus | mmu-miR-203 | 22/22 | Contig7903 | - | 49-70 | 107925-108002 | 0.999836 | Ortholog | 12/21 | 1/25 |
4 | cfa-mir-203 | Canis familiaris | cfa-miR-203 | 22/22 | chr8 | + | 56-77 | N/A | - | miRBase_13_0 | 12/21 | 1/25 |
5 | cavPor3-132 | Cavia porcellus | mmu-miR-203* | 21/22 | scaffold_111 | + | 15-36 | 3483094-3483177 | 0.999966 | Ortholog | 12/21 | 2/25 |
6 | cavPor3-132 | Cavia porcellus | gga-miR-203 | 20/22 | scaffold_111 | + | 52-71 | 3483095-3483178 | 0.999964 | Ortholog | 12/21 | 2/25 |
7 | cavPor3-132 | Cavia porcellus | mmu-miR-203 | 22/22 | scaffold_111 | + | 51-72 | 3483096-3483177 | 0.999933 | Ortholog | 12/21 | 2/25 |
8 | cavPor3-167 | Cavia porcellus | gga-miR-203 | 20/22 | scaffold_12 | + | 26-47 | 24336691-24336784 | 0.89636 | Ortholog | 12/21 | 2/25 |
9 | dre-mir-203a | Danio rerio | dre-miR-203a | 22/22 | chr17 | - | 70-91 | N/A | - | miRBase_13_0 | 12/21 | 2/25 |
10 | dre-mir-203b | Danio rerio | dre-miR-203b | 22/22 | chr20 | - | 51-72 | N/A | - | miRBase_13_0 | 12/21 | 2/25 |
11 | dre-mir-203b | Danio rerio | dre-miR-203b* | 22/22 | chr20 | - | 14-35 | N/A | - | miRBase_13_0 | 12/21 | 2/25 |
12 | eriEur1-76 | Erinaceus europaeus | mmu-miR-203 | 22/22 | scaffold_276839 | + | 51-72 | N/A | 0.999523 | Ortholog | 12/21 | 1/25 |
13 | eriEur1-76 | Erinaceus europaeus | gga-miR-203 | 20/22 | scaffold_276839 | + | 53-72 | N/A | 0.999865 | Ortholog | 12/21 | 1/25 |
14 | eriEur1-76 | Erinaceus europaeus | mmu-miR-203* | 21/22 | scaffold_276839 | + | 13-34 | N/A | 0.999816 | Ortholog | 12/21 | 1/25 |
15 | fr2-83 | Fugu rubripes | mmu-miR-203 | 20/22 | chrUn | + | 52-71 | 160527537-160527620 | 0.996307 | Paralog | 12/21 | 2/25 |
16 | fr2-83 | Fugu rubripes | fru-miR-203 | 22/22 | chrUn | + | 51-72 | 160527538-160527621 | 0.995066 | Paralog | 12/21 | 2/25 |
17 | fr2-83 | Fugu rubripes | dre-miR-203b* | 22/22 | chrUn | + | 15-36 | 160527536-160527619 | 0.989852 | Paralog | 12/21 | 2/25 |
18 | fru-mir-203 | Fugu rubripes | fru-miR-203 | 22/22 | scaffold_88 | + | 46-67 | N/A | - | miRBase_13_0 | 12/21 | 2/25 |
19 | gga-mir-203 | Gallus gallus | gga-miR-203 | 22/22 | chr5 | + | 56-77 | N/A | - | miRBase_13_0 | 12/21 | 1/25 |
20 | hsa-mir-203 | Homo sapiens | hsa-miR-203 | 22/22 | chr14 | + | 65-86 | 103653495-103653604 | - | miRBase_13_0 | 12/21 | 1/25 |
21 | mml-mir-203 | Macaca mulatta | mml-miR-203 | 22/22 | chr7 | + | 65-86 | N/A | - | miRBase_13_0 | 12/21 | 1/25 |
22 | mdo-mir-203 | Monodelphis domestica | mdo-miR-203 | 22/22 | chr1 | - | 53-74 | N/A | - | miRBase_13_0 | 12/21 | 2/25 |
23 | monDom4-48 | Monodelphis domestica | mmu-miR-203 | 20/22 | chr1 | - | 50-69 | 311187368-311187447 | 0.999614 | Paralog | 12/21 | 2/25 |
24 | monDom4-48 | Monodelphis domestica | mdo-miR-203 | 22/22 | chr1 | - | 49-70 | 311187369-311187446 | 0.999486 | Paralog | 12/21 | 2/25 |
25 | monDom4-48 | Monodelphis domestica | mmu-miR-203* | 21/22 | chr1 | - | 14-35 | 311187365-311187449 | 0.999762 | Paralog | 12/21 | 2/25 |
26 | mmu-mir-203 | Mus musculus | mmu-miR-203 | 22/22 | chr12 | + | 48-69 | N/A | - | miRBase_13_0 | 12/21 | 1/25 |
27 | mmu-mir-203 | Mus musculus | mmu-miR-203* | 22/22 | chr12 | + | 10-31 | N/A | - | miRBase_13_0 | 12/21 | 1/25 |
28 | ornAna1-148 | Ornithorhynchus anatinus | mmu-miR-203 | 20/22 | Contig86692 | - | 50-69 | 85-165 | 0.996517 | Ortholog | 12/21 | 1/25 |
29 | ornAna1-148 | Ornithorhynchus anatinus | gga-miR-203 | 22/22 | Contig86692 | - | 49-70 | 84-164 | 0.997502 | Ortholog | 12/21 | 1/25 |
30 | ornAna1-148 | Ornithorhynchus anatinus | mmu-miR-203* | 21/22 | Contig86692 | - | 14-35 | 83-167 | 0.996347 | Ortholog | 12/21 | 1/25 |
31 | oryLat2-234 | Oryzias latipes | dre-miR-203b* | 22/22 | chr22 | - | 18-39 | 12363261-12363349 | 0.987006 | Ortholog | 12/21 | 1/25 |
32 | oryLat2-234 | Oryzias latipes | mmu-miR-203 | 20/22 | chr22 | - | 50-69 | 12363257-12363343 | 0.999092 | Ortholog | 12/21 | 1/25 |
33 | otoGar1-183 | Otolemur garnettii | mmu-miR-203* | 21/22 | scaffold_116219.1-106181 | + | 13-34 | N/A | 0.999534 | Ortholog | 12/21 | 1/25 |
34 | otoGar1-183 | Otolemur garnettii | gga-miR-203 | 20/22 | scaffold_116219.1-106181 | + | 52-71 | N/A | 0.9994 | Ortholog | 12/21 | 1/25 |
35 | otoGar1-183 | Otolemur garnettii | mmu-miR-203 | 22/22 | scaffold_116219.1-106181 | + | 51-72 | N/A | 0.99907 | Ortholog | 12/21 | 1/25 |
36 | ptr-mir-203 | Pan troglodytes | ptr-miR-203 | 22/22 | chr14 | + | 64-85 | N/A | - | miRBase_13_0 | 12/21 | 1/25 |
37 | petMar1-7 | Petromyzon marinus | gga-miR-203 | 22/22 | Contig11172 | - | 49-70 | 6196-6273 | 0.999632 | Ortholog | 12/21 | 1/25 |
38 | petMar1-7 | Petromyzon marinus | mmu-miR-203 | 20/22 | Contig11172 | - | 50-69 | 6195-6274 | 0.999785 | Ortholog | 12/21 | 1/25 |
39 | ponAbe2-240 | Pongo abelii | mmu-miR-203* | 21/22 | chr14 | + | 13-34 | 105836010-105836091 | 0.999941 | Ortholog | 12/21 | 1/25 |
40 | ponAbe2-240 | Pongo abelii | mmu-miR-203 | 22/22 | chr14 | + | 51-72 | 105836010-105836091 | 0.999885 | Ortholog | 12/21 | 1/25 |
41 | ponAbe2-240 | Pongo abelii | gga-miR-203 | 20/22 | chr14 | + | 52-71 | 105836009-105836092 | 0.999938 | Ortholog | 12/21 | 1/25 |
42 | rno-mir-203 | Rattus norvegicus | rno-miR-203 | 22/22 | chr6 | + | 52-73 | N/A | - | miRBase_13_0 | 12/21 | 1/25 |
43 | taeGut1-288 | Taeniopygia guttata | mmu-miR-203* | 21/22 | chr5 | + | 13-34 | 52214105-52214186 | 0.997726 | Ortholog | 12/21 | 1/25 |
44 | taeGut1-288 | Taeniopygia guttata | mmu-miR-203 | 20/22 | chr5 | + | 52-71 | 52214104-52214187 | 0.997033 | Ortholog | 12/21 | 1/25 |
45 | taeGut1-288 | Taeniopygia guttata | gga-miR-203 | 22/22 | chr5 | + | 51-72 | 52214105-52214186 | 0.996866 | Ortholog | 12/21 | 1/25 |
46 | tni-mir-203 | Tetraodon nigroviridis | tni-miR-203 | 22/22 | chrUn_random | + | 46-67 | N/A | - | miRBase_13_0 | 12/21 | 1/25 |
47 | xtr-mir-203 | Xenopus tropicalis | xtr-miR-203 | 22/22 | scaffold_525 | + | 47-68 | N/A | - | miRBase_13_0 | 12/21 | 1/25 |
Total | 47 record(s). |