- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-216 | Anolis carolinensis | mmu-miR-205 | 20/22 | scaffold_365 | + | 17-37 | 1429870-1429954 | 0.863109 | Ortholog | 19/38 | 2/48 |
2 | anoCar1-216 | Anolis carolinensis | oan-miR-205 | 19/21 | scaffold_365 | + | 17-36 | 1429870-1429954 | 0.907382 | Ortholog | 19/38 | 2/48 |
3 | anoCar1-72 | Anolis carolinensis | oan-miR-205* | 22/22 | scaffold_13 | + | 50-71 | 6764330-6764409 | 0.997777 | Ortholog | 19/38 | 2/48 |
4 | anoCar1-72 | Anolis carolinensis | oan-miR-205 | 21/21 | scaffold_13 | + | 13-33 | 6764330-6764409 | 0.986494 | Ortholog | 19/38 | 2/48 |
5 | anoCar1-72 | Anolis carolinensis | mmu-miR-205 | 22/22 | scaffold_13 | + | 13-34 | 6764330-6764409 | 0.978851 | Ortholog | 19/38 | 2/48 |
6 | age-mir-205 | Ateles geoffroyi | age-miR-205 | 22/22 | N/A | N/A | 34-55 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
7 | bta-mir-205 | Bos taurus | bta-miR-205 | 22/22 | chr16 | - | 7-28 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
8 | calJac1-341 | Callithrix jacchus | mmu-miR-205 | 22/22 | Contig2656 | - | 18-39 | 153832-153919 | 0.99691 | Ortholog | 19/38 | 1/48 |
9 | calJac1-341 | Callithrix jacchus | oan-miR-205 | 21/21 | Contig2656 | - | 18-38 | 153832-153919 | 0.997775 | Ortholog | 19/38 | 1/48 |
10 | calJac1-341 | Callithrix jacchus | hsa-miR-205* | 21/21 | Contig2656 | - | 50-70 | 153831-153914 | 0.999896 | Ortholog | 19/38 | 1/48 |
11 | cfa-mir-205 | Canis familiaris | cfa-miR-205 | 22/22 | chr7 | + | 7-28 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
12 | cavPor3-171 | Cavia porcellus | mmu-miR-205 | 22/22 | scaffold_12 | - | 19-40 | 13745505-13745594 | 0.998189 | Ortholog | 19/38 | 1/48 |
13 | cavPor3-171 | Cavia porcellus | oan-miR-205 | 21/21 | scaffold_12 | - | 17-37 | 13745509-13745592 | 0.998643 | Ortholog | 19/38 | 1/48 |
14 | cavPor3-171 | Cavia porcellus | oan-miR-205* | 20/22 | scaffold_12 | - | 49-70 | 13745512-13745589 | 0.999504 | Ortholog | 19/38 | 1/48 |
15 | dre-mir-205 | Danio rerio | dre-miR-205 | 22/22 | chr23 | + | 19-40 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
16 | dasNov1-53 | Dasypus novemcinctus | hsa-miR-205* | 21/21 | scaffold_1580 | + | 51-71 | N/A | 0.999826 | Ortholog | 19/38 | 1/48 |
17 | dasNov1-53 | Dasypus novemcinctus | mmu-miR-205 | 22/22 | scaffold_1580 | + | 14-35 | N/A | 0.99527 | Ortholog | 19/38 | 1/48 |
18 | dasNov1-53 | Dasypus novemcinctus | oan-miR-205 | 21/21 | scaffold_1580 | + | 14-34 | N/A | 0.996715 | Ortholog | 19/38 | 1/48 |
19 | droSim1-74 | Drosophila simulans | hsa-miR-205* | 19/21 | chr3L | - | 20-40 | 13852620-13852700 | 0.998454 | Ortholog | 19/38 | 1/48 |
20 | echTel1-190 | Echinops telfari | mmu-miR-205 | 22/22 | scaffold_288378 | + | 14-35 | N/A | 0.99365 | Ortholog | 19/38 | 1/48 |
21 | echTel1-190 | Echinops telfari | oan-miR-205 | 21/21 | scaffold_288378 | + | 14-34 | N/A | 0.995588 | Ortholog | 19/38 | 1/48 |
22 | echTel1-190 | Echinops telfari | hsa-miR-205* | 21/21 | scaffold_288378 | + | 51-71 | N/A | 0.999776 | Ortholog | 19/38 | 1/48 |
23 | equCab1-504 | Equus caballus | mmu-miR-205 | 22/22 | chr5 | - | 18-39 | 20019441-20019528 | 0.993462 | Ortholog | 19/38 | 1/48 |
24 | equCab1-504 | Equus caballus | oan-miR-205 | 21/21 | chr5 | - | 18-38 | 20019441-20019528 | 0.995571 | Ortholog | 19/38 | 1/48 |
25 | equCab1-504 | Equus caballus | hsa-miR-205* | 21/21 | chr5 | - | 49-69 | 20019444-20019522 | 0.999755 | Ortholog | 19/38 | 1/48 |
26 | felCat3-347 | Felis catus | hsa-miR-205* | 21/21 | scaffold_212011 | + | 51-71 | 168719-168801 | 0.99975 | Ortholog | 19/38 | 1/48 |
27 | felCat3-347 | Felis catus | mmu-miR-205 | 22/22 | scaffold_212011 | + | 14-35 | 168719-168801 | 0.993462 | Ortholog | 19/38 | 1/48 |
28 | felCat3-347 | Felis catus | oan-miR-205 | 21/21 | scaffold_212011 | + | 14-34 | 168719-168801 | 0.995571 | Ortholog | 19/38 | 1/48 |
29 | fr2-325 | Fugu rubripes | oan-miR-205 | 21/21 | chrUn | - | 13-33 | 296930578-296930659 | 0.963571 | Paralog | 19/38 | 2/48 |
30 | fr2-325 | Fugu rubripes | fru-miR-205 | 22/22 | chrUn | - | 17-38 | 296930576-296930663 | 0.942619 | Paralog | 19/38 | 2/48 |
31 | fru-mir-205 | Fugu rubripes | fru-miR-205 | 22/22 | scaffold_325 | - | 10-31 | N/A | - | miRBase_13_0 | 19/38 | 2/48 |
32 | gga-mir-205a | Gallus gallus | gga-miR-205a | 22/22 | chr26 | + | 22-43 | N/A | - | miRBase_13_0 | 19/38 | 2/48 |
33 | gga-mir-205b | Gallus gallus | gga-miR-205b | 22/22 | chr1 | - | 26-47 | N/A | - | miRBase_13_0 | 19/38 | 2/48 |
34 | gasAcu1-492 | Gasterosteus aculeatus | mmu-miR-205 | 22/22 | chrXII | - | 17-38 | 13937687-13937774 | 0.993348 | Ortholog | 19/38 | 2/48 |
35 | gasAcu1-492 | Gasterosteus aculeatus | oan-miR-205 | 21/21 | chrXII | - | 15-35 | 13937689-13937772 | 0.994788 | Ortholog | 19/38 | 2/48 |
36 | gasAcu1-628 | Gasterosteus aculeatus | mmu-miR-205 | 22/22 | chrXVII | - | 14-35 | 2565193-2565276 | 0.846035 | Ortholog | 19/38 | 2/48 |
37 | gasAcu1-628 | Gasterosteus aculeatus | oan-miR-205 | 21/21 | chrXVII | - | 14-34 | 2565193-2565276 | 0.903017 | Ortholog | 19/38 | 2/48 |
38 | ggo-mir-205 | Gorilla gorilla | ggo-miR-205 | 22/22 | N/A | N/A | 34-55 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
39 | hsa-mir-205 | Homo sapiens | hsa-miR-205 | 22/22 | chr1 | + | 34-55 | 207672101-207672210 | - | miRBase_13_0 | 19/38 | 1/48 |
40 | hsa-mir-205 | Homo sapiens | hsa-miR-205* | 21/21 | chr1 | + | 71-91 | 207672101-207672210 | - | miRBase_13_0 | 19/38 | 1/48 |
41 | lla-mir-205 | Lagothrix lagotricha | lla-miR-205 | 22/22 | N/A | N/A | 34-55 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
42 | loxAfr1-307 | Loxodonta africana | oan-miR-205 | 21/21 | scaffold_56898 | + | 14-34 | N/A | 0.997822 | Ortholog | 19/38 | 1/48 |
43 | loxAfr1-307 | Loxodonta africana | mmu-miR-205 | 22/22 | scaffold_56898 | + | 14-35 | N/A | 0.996953 | Ortholog | 19/38 | 1/48 |
44 | loxAfr1-307 | Loxodonta africana | hsa-miR-205* | 21/21 | scaffold_56898 | + | 51-71 | N/A | 0.999889 | Ortholog | 19/38 | 1/48 |
45 | mml-mir-205 | Macaca mulatta | mml-miR-205 | 22/22 | chr1 | - | 34-55 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
46 | mne-mir-205 | Macaca nemestrina | mne-miR-205 | 22/22 | N/A | N/A | 34-55 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
47 | monDom4-117 | Monodelphis domestica | oan-miR-205 | 21/21 | chr2 | + | 14-34 | 116544486-116544568 | 0.994789 | Ortholog | 19/38 | 2/48 |
48 | monDom4-117 | Monodelphis domestica | mmu-miR-205 | 22/22 | chr2 | + | 14-35 | 116544486-116544568 | 0.992182 | Ortholog | 19/38 | 2/48 |
49 | monDom4-117 | Monodelphis domestica | oan-miR-205* | 20/22 | chr2 | + | 52-71 | 116544485-116544570 | 0.999433 | Ortholog | 19/38 | 2/48 |
50 | monDom4-408 | Monodelphis domestica | hsa-miR-205* | 19/21 | chr7 | - | 11-29 | 108276768-108276834 | 0.919481 | Ortholog | 19/38 | 2/48 |
51 | mmu-mir-205 | Mus musculus | mmu-miR-205 | 22/22 | chr1 | - | 7-28 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
52 | oan-mir-205 | Ornithorhynchus anatinus | oan-miR-205* | 22/22 | chr7 | + | 68-89 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
53 | oan-mir-205 | Ornithorhynchus anatinus | oan-miR-205 | 21/21 | chr7 | + | 31-51 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
54 | oryCun1-467 | Oryctolagus cuniculus | gga-miR-205b | 20/22 | scaffold_212714 | - | 19-39 | N/A | 0.98988 | Ortholog | 19/38 | 1/48 |
55 | oryCun1-467 | Oryctolagus cuniculus | mmu-miR-205 | 22/22 | scaffold_212714 | - | 18-39 | N/A | 0.99512 | Ortholog | 19/38 | 1/48 |
56 | oryCun1-467 | Oryctolagus cuniculus | hsa-miR-205* | 21/21 | scaffold_212714 | - | 50-70 | N/A | 0.999834 | Ortholog | 19/38 | 1/48 |
57 | oryCun1-467 | Oryctolagus cuniculus | oan-miR-205 | 21/21 | scaffold_212714 | - | 18-38 | N/A | 0.996535 | Ortholog | 19/38 | 1/48 |
58 | oryLat2-307 | Oryzias latipes | oan-miR-205 | 21/21 | chr5 | + | 13-33 | 14405630-14405711 | 0.964303 | Ortholog | 19/38 | 1/48 |
59 | oryLat2-307 | Oryzias latipes | xtr-miR-205b | 20/22 | chr5 | + | 13-34 | 14405630-14405711 | 0.942374 | Ortholog | 19/38 | 1/48 |
60 | oryLat2-307 | Oryzias latipes | gga-miR-205b | 20/22 | chr5 | + | 15-35 | 14405629-14405712 | 0.899597 | Ortholog | 19/38 | 1/48 |
61 | otoGar1-262 | Otolemur garnettii | mmu-miR-205 | 22/22 | scaffold_120707.1-465827 | + | 16-37 | N/A | 0.996841 | Ortholog | 19/38 | 1/48 |
62 | otoGar1-262 | Otolemur garnettii | hsa-miR-205* | 21/21 | scaffold_120707.1-465827 | + | 51-71 | N/A | 0.99989 | Ortholog | 19/38 | 1/48 |
63 | otoGar1-262 | Otolemur garnettii | oan-miR-205 | 21/21 | scaffold_120707.1-465827 | + | 16-36 | N/A | 0.997712 | Ortholog | 19/38 | 1/48 |
64 | ppa-mir-205 | Pan paniscus | ppa-miR-205 | 22/22 | N/A | N/A | 34-55 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
65 | ptr-mir-205 | Pan troglodytes | ptr-miR-205 | 22/22 | chr1 | + | 34-55 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
66 | petMar1-36 | Petromyzon marinus | oan-miR-205 | 20/21 | Contig16452 | - | 15-34 | 14450-14534 | 0.994198 | Ortholog | 19/38 | 2/48 |
67 | petMar1-36 | Petromyzon marinus | mmu-miR-205 | 21/22 | Contig16452 | - | 15-35 | 14450-14534 | 0.991568 | Ortholog | 19/38 | 2/48 |
68 | petMar1-52 | Petromyzon marinus | mmu-miR-205 | 22/22 | Contig21921 | + | 17-38 | 1427-1512 | 0.998238 | Ortholog | 19/38 | 2/48 |
69 | petMar1-52 | Petromyzon marinus | oan-miR-205 | 21/21 | Contig21921 | + | 17-37 | 1427-1512 | 0.998703 | Ortholog | 19/38 | 2/48 |
70 | ponAbe2-47 | Pongo abelii | oan-miR-205 | 21/21 | chr1 | - | 18-38 | 40697512-40697599 | 0.997775 | Ortholog | 19/38 | 1/48 |
71 | ponAbe2-47 | Pongo abelii | mmu-miR-205 | 22/22 | chr1 | - | 18-39 | 40697512-40697599 | 0.99691 | Ortholog | 19/38 | 1/48 |
72 | ponAbe2-47 | Pongo abelii | hsa-miR-205* | 21/21 | chr1 | - | 50-70 | 40697511-40697594 | 0.999896 | Ortholog | 19/38 | 1/48 |
73 | rno-mir-205 | Rattus norvegicus | rno-miR-205 | 22/22 | chr13 | - | 33-54 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
74 | sorAra1-73 | Sorex araneus | oan-miR-205 | 21/21 | scaffold_222846 | - | 18-38 | N/A | 0.999564 | Ortholog | 19/38 | 2/48 |
75 | sorAra1-73 | Sorex araneus | mmu-miR-205 | 22/22 | scaffold_222846 | - | 20-41 | N/A | 0.999505 | Ortholog | 19/38 | 2/48 |
76 | sorAra1-87 | Sorex araneus | oan-miR-205* | 20/22 | scaffold_231377 | + | 18-38 | N/A | 0.87137 | Ortholog | 19/38 | 2/48 |
77 | ssc-mir-205 | Sus scrofa | ssc-miR-205 | 22/22 | chr9 | - | 7-28 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
78 | taeGut1-137 | Taeniopygia guttata | gga-miR-205b | 22/22 | chr1A | - | 18-39 | 622275-622363 | 0.847433 | Ortholog | 19/38 | 3/48 |
79 | taeGut1-137 | Taeniopygia guttata | mmu-miR-205 | 20/22 | chr1A | - | 19-39 | 622275-622363 | 0.899656 | Ortholog | 19/38 | 3/48 |
80 | taeGut1-137 | Taeniopygia guttata | oan-miR-205 | 19/21 | chr1A | - | 19-38 | 622275-622363 | 0.931023 | Ortholog | 19/38 | 3/48 |
81 | taeGut1-221 | Taeniopygia guttata | mmu-miR-205 | 22/22 | chr26 | - | 18-39 | 3381029-3381115 | 0.977845 | Ortholog | 19/38 | 3/48 |
82 | taeGut1-221 | Taeniopygia guttata | oan-miR-205* | 22/22 | chr26 | - | 49-70 | 3381032-3381110 | 0.997311 | Ortholog | 19/38 | 3/48 |
83 | taeGut1-221 | Taeniopygia guttata | oan-miR-205 | 21/21 | chr26 | - | 18-38 | 3381029-3381115 | 0.986437 | Ortholog | 19/38 | 3/48 |
84 | taeGut1-223 | Taeniopygia guttata | oan-miR-205 | 21/21 | chr26 | - | 14-34 | 3385289-3385367 | 0.987037 | Ortholog | 19/38 | 3/48 |
85 | taeGut1-223 | Taeniopygia guttata | oan-miR-205* | 22/22 | chr26 | - | 46-67 | 3385289-3385363 | 0.997351 | Ortholog | 19/38 | 3/48 |
86 | taeGut1-223 | Taeniopygia guttata | mmu-miR-205 | 22/22 | chr26 | - | 14-35 | 3385289-3385367 | 0.980019 | Ortholog | 19/38 | 3/48 |
87 | tni-mir-205 | Tetraodon nigroviridis | tni-miR-205 | 22/22 | chr9 | - | 3-24 | N/A | - | miRBase_13_0 | 19/38 | 1/48 |
88 | tupBel1-620 | Tupaia belangeri | oan-miR-205 | 21/21 | scaffold_14612.1-373942 | + | 14-34 | N/A | 0.996783 | Ortholog | 19/38 | 1/48 |
89 | tupBel1-620 | Tupaia belangeri | mmu-miR-205 | 22/22 | scaffold_14612.1-373942 | + | 14-35 | N/A | 0.995373 | Ortholog | 19/38 | 1/48 |
90 | tupBel1-620 | Tupaia belangeri | hsa-miR-205* | 21/21 | scaffold_14612.1-373942 | + | 51-71 | N/A | 0.999829 | Ortholog | 19/38 | 1/48 |
91 | xtr-mir-205a | Xenopus tropicalis | xtr-miR-205a | 22/22 | scaffold_61 | + | 16-37 | N/A | - | miRBase_13_0 | 19/38 | 2/48 |
92 | xtr-mir-205b | Xenopus tropicalis | xtr-miR-205b | 22/22 | scaffold_44 | + | 9-30 | N/A | - | miRBase_13_0 | 19/38 | 2/48 |
Total | 92 record(s). |