- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-208a | Bos taurus | bta-miR-208a | 22/22 | chr10 | + | 44-65 | N/A | - | miRBase_13_0 | 10/20 | 2/27 |
2 | bta-mir-208b | Bos taurus | bta-miR-208b | 22/22 | chr10 | - | 46-67 | N/A | - | miRBase_13_0 | 10/20 | 2/27 |
3 | calJac1-646 | Callithrix jacchus | mdo-miR-208 | 21/22 | Contig824 | - | 49-70 | 147567-147647 | 0.998991 | Ortholog | 10/20 | 1/27 |
4 | cfa-mir-208a | Canis familiaris | cfa-miR-208a | 22/22 | chr8 | - | 42-63 | N/A | - | miRBase_13_0 | 10/20 | 2/27 |
5 | cfa-mir-208b | Canis familiaris | cfa-miR-208b | 22/22 | chr8 | - | 46-67 | N/A | - | miRBase_13_0 | 10/20 | 2/27 |
6 | cavPor3-201 | Cavia porcellus | mdo-miR-208 | 21/22 | scaffold_13 | + | 50-71 | 17471056-17471138 | 0.996205 | Ortholog | 10/20 | 1/27 |
7 | echTel1-375 | Echinops telfari | mdo-miR-208 | 21/22 | scaffold_322757 | + | 50-71 | N/A | 0.999031 | Ortholog | 10/20 | 1/27 |
8 | equCab1-643 | Equus caballus | mmu-miR-208b | 22/22 | chrUn | + | 51-72 | 181218442-181218527 | 0.972593 | Ortholog | 10/20 | 2/27 |
9 | equCab1-644 | Equus caballus | mdo-miR-208 | 21/22 | chrUn | + | 50-71 | 181246544-181246626 | 0.999207 | Ortholog | 10/20 | 2/27 |
10 | eriEur1-306 | Erinaceus europaeus | mmu-miR-208b | 22/22 | scaffold_375392 | + | 50-71 | N/A | 0.975339 | Ortholog | 10/20 | 1/27 |
11 | felCat3-357 | Felis catus | mdo-miR-208 | 21/22 | scaffold_213104 | - | 49-70 | 117165-117245 | 0.999435 | Ortholog | 10/20 | 1/27 |
12 | hsa-mir-208a | Homo sapiens | hsa-miR-208a | 22/22 | chr14 | - | 44-65 | 22927645-22927715 | - | miRBase_13_0 | 10/20 | 2/27 |
13 | hsa-mir-208b | Homo sapiens | hsa-miR-208b | 22/22 | chr14 | - | 46-67 | 22957036-22957112 | - | miRBase_13_0 | 10/20 | 2/27 |
14 | loxAfr1-361 | Loxodonta africana | mdo-miR-208 | 21/22 | scaffold_6807 | - | 49-70 | N/A | 0.998794 | Ortholog | 10/20 | 1/27 |
15 | mml-mir-208a | Macaca mulatta | mml-miR-208a | 22/22 | chr7 | - | 44-65 | N/A | - | miRBase_13_0 | 10/20 | 2/27 |
16 | mml-mir-208b | Macaca mulatta | mml-miR-208b | 22/22 | chr7 | - | 46-67 | N/A | - | miRBase_13_0 | 10/20 | 2/27 |
17 | mdo-mir-208 | Monodelphis domestica | mdo-miR-208 | 22/22 | chr1 | - | 50-71 | N/A | - | miRBase_13_0 | 10/20 | 1/27 |
18 | mmu-mir-208a | Mus musculus | mmu-miR-208a | 22/22 | chr14 | - | 50-71 | N/A | - | miRBase_13_0 | 10/20 | 2/27 |
19 | mmu-mir-208b | Mus musculus | mmu-miR-208b | 22/22 | chr14 | - | 46-67 | N/A | - | miRBase_13_0 | 10/20 | 2/27 |
20 | oan-mir-208 | Ornithorhynchus anatinus | oan-miR-208* | 22/22 | Contig16216 | - | 34-55 | N/A | - | miRBase_13_0 | 10/20 | 1/27 |
21 | oan-mir-208 | Ornithorhynchus anatinus | oan-miR-208 | 22/22 | Contig16216 | - | 69-90 | N/A | - | miRBase_13_0 | 10/20 | 1/27 |
22 | otoGar1-131 | Otolemur garnettii | mdo-miR-208 | 21/22 | scaffold_115105.1-166360 | - | 49-70 | N/A | 0.998794 | Ortholog | 10/20 | 1/27 |
23 | ptr-mir-208a | Pan troglodytes | ptr-miR-208a | 22/22 | chr14 | - | 44-65 | N/A | - | miRBase_13_0 | 10/20 | 2/27 |
24 | ptr-mir-208b | Pan troglodytes | ptr-miR-208b | 22/22 | chr14 | - | 46-67 | N/A | - | miRBase_13_0 | 10/20 | 2/27 |
25 | ponAbe2-244 | Pongo abelii | mdo-miR-208 | 21/22 | chr14 | - | 49-70 | 22873219-22873299 | 0.998794 | Ortholog | 10/20 | 1/27 |
26 | rno-mir-208 | Rattus norvegicus | rno-miR-208 | 22/22 | chr15 | - | 50-71 | N/A | - | miRBase_13_0 | 10/20 | 1/27 |
27 | tupBel1-610 | Tupaia belangeri | mdo-miR-208 | 21/22 | scaffold_145330.1-209709 | - | 49-70 | N/A | 0.994949 | Ortholog | 10/20 | 1/27 |
28 | xtr-mir-208 | Xenopus tropicalis | xtr-miR-208 | 22/22 | scaffold_439 | + | 50-71 | N/A | - | miRBase_13_0 | 10/20 | 1/27 |
Total | 28 record(s). |