- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-150 | Anolis carolinensis | bta-miR-211 | 20/21 | scaffold_230 | - | 9-29 | 191464-191538 | 0.99077 | Ortholog | 10/28 | 1/35 |
2 | bta-mir-211 | Bos taurus | bta-miR-211 | 21/21 | chrUn.004.8326 | - | 26-46 | N/A | - | miRBase_13_0 | 10/28 | 1/35 |
3 | cfa-mir-211 | Canis familiaris | cfa-miR-211 | 22/22 | chr3 | + | 22-43 | N/A | - | miRBase_13_0 | 10/28 | 1/35 |
4 | cavPor3-348 | Cavia porcellus | mmu-miR-211 | 21/22 | scaffold_21 | - | 16-37 | 21988235-21988320 | 0.996842 | Ortholog | 10/28 | 1/35 |
5 | cavPor3-348 | Cavia porcellus | bta-miR-211 | 20/21 | scaffold_21 | - | 16-36 | 21988235-21988320 | 0.996135 | Ortholog | 10/28 | 1/35 |
6 | danRer5-236 | Danio rerio | mmu-miR-211 | 21/22 | chr25 | - | 31-52 | 28309659-28309758 | 0.916829 | Ortholog | 10/28 | 1/35 |
7 | danRer5-236 | Danio rerio | bta-miR-211 | 20/21 | chr25 | - | 31-51 | 28309659-28309758 | 0.92381 | Ortholog | 10/28 | 1/35 |
8 | dasNov1-215 | Dasypus novemcinctus | bta-miR-211 | 21/21 | scaffold_35736 | + | 16-36 | N/A | 0.957322 | Ortholog | 10/28 | 2/35 |
9 | dasNov1-215 | Dasypus novemcinctus | mmu-miR-211 | 22/22 | scaffold_35736 | + | 16-37 | N/A | 0.961918 | Ortholog | 10/28 | 2/35 |
10 | dasNov1-41 | Dasypus novemcinctus | mmu-miR-211 | 21/22 | scaffold_146566 | + | 15-36 | N/A | 0.996439 | Ortholog | 10/28 | 2/35 |
11 | dasNov1-41 | Dasypus novemcinctus | bta-miR-211 | 20/21 | scaffold_146566 | + | 15-35 | N/A | 0.995673 | Ortholog | 10/28 | 2/35 |
12 | echTel1-85 | Echinops telfari | mmu-miR-211 | 21/22 | scaffold_230818 | + | 13-34 | N/A | 0.997508 | Ortholog | 10/28 | 1/35 |
13 | echTel1-85 | Echinops telfari | bta-miR-211 | 20/21 | scaffold_230818 | + | 13-33 | N/A | 0.996954 | Ortholog | 10/28 | 1/35 |
14 | equCab1-265 | Equus caballus | bta-miR-211 | 20/21 | chr20 | - | 22-42 | 29228093-29228184 | 0.942427 | Ortholog | 10/28 | 2/35 |
15 | equCab1-297 | Equus caballus | bta-miR-211 | 20/21 | chr23 | + | 15-35 | 10440013-10440096 | 0.995673 | Ortholog | 10/28 | 2/35 |
16 | equCab1-297 | Equus caballus | mmu-miR-211 | 21/22 | chr23 | + | 15-36 | 10440013-10440096 | 0.996439 | Ortholog | 10/28 | 2/35 |
17 | eriEur1-39 | Erinaceus europaeus | mmu-miR-211 | 22/22 | scaffold_224788 | + | 14-35 | N/A | 0.979148 | Ortholog | 10/28 | 2/35 |
18 | eriEur1-39 | Erinaceus europaeus | bta-miR-211 | 21/21 | scaffold_224788 | + | 14-34 | N/A | 0.975979 | Ortholog | 10/28 | 2/35 |
19 | eriEur1-50 | Erinaceus europaeus | bta-miR-211 | 20/21 | scaffold_233154 | + | 15-35 | N/A | 0.995673 | Ortholog | 10/28 | 2/35 |
20 | eriEur1-50 | Erinaceus europaeus | mmu-miR-211 | 21/22 | scaffold_233154 | + | 15-36 | N/A | 0.996439 | Ortholog | 10/28 | 2/35 |
21 | felCat3-358 | Felis catus | mmu-miR-211 | 22/22 | scaffold_213301 | - | 16-37 | 119392-119477 | 0.957342 | Ortholog | 10/28 | 1/35 |
22 | fr2-12 | Fugu rubripes | mmu-miR-211 | 21/22 | chrUn | + | 32-53 | 8147052-8147152 | 0.915903 | Ortholog | 10/28 | 1/35 |
23 | fr2-12 | Fugu rubripes | bta-miR-211 | 20/21 | chrUn | + | 32-52 | 8147052-8147152 | 0.916993 | Ortholog | 10/28 | 1/35 |
24 | gga-mir-211 | Gallus gallus | gga-miR-211 | 22/22 | chr28 | + | 10-31 | N/A | - | miRBase_13_0 | 10/28 | 1/35 |
25 | gasAcu1-522 | Gasterosteus aculeatus | bta-miR-211 | 20/21 | chrXIII | - | 14-34 | 11729839-11729922 | 0.993267 | Ortholog | 10/28 | 2/35 |
26 | gasAcu1-522 | Gasterosteus aculeatus | mmu-miR-211 | 21/22 | chrXIII | - | 15-36 | 11729838-11729923 | 0.99433 | Ortholog | 10/28 | 2/35 |
27 | gasAcu1-54 | Gasterosteus aculeatus | bta-miR-211 | 21/21 | chrII | + | 16-36 | 22386869-22386953 | 0.988716 | Ortholog | 10/28 | 2/35 |
28 | gasAcu1-54 | Gasterosteus aculeatus | mmu-miR-211 | 22/22 | chrII | + | 16-37 | 22386869-22386953 | 0.989886 | Ortholog | 10/28 | 2/35 |
29 | hsa-mir-211 | Homo sapiens | hsa-miR-211 | 22/22 | chr15 | - | 26-47 | 29144527-29144636 | - | miRBase_13_0 | 10/28 | 1/35 |
30 | loxAfr1-165 | Loxodonta africana | mmu-miR-211 | 22/22 | scaffold_29731 | + | 21-42 | N/A | 0.987929 | Ortholog | 10/28 | 1/35 |
31 | loxAfr1-165 | Loxodonta africana | bta-miR-211 | 21/21 | scaffold_29731 | + | 21-41 | N/A | 0.988061 | Ortholog | 10/28 | 1/35 |
32 | mml-mir-211 | Macaca mulatta | mml-miR-211 | 22/22 | chr7 | - | 25-46 | N/A | - | miRBase_13_0 | 10/28 | 1/35 |
33 | mne-mir-211 | Macaca nemestrina | mne-miR-211 | 22/22 | N/A | N/A | 25-46 | N/A | - | miRBase_13_0 | 10/28 | 1/35 |
34 | monDom4-367 | Monodelphis domestica | mmu-miR-211 | 21/22 | chr6 | + | 15-36 | 95848835-95848918 | 0.995264 | Ortholog | 10/28 | 2/35 |
35 | monDom4-367 | Monodelphis domestica | bta-miR-211 | 20/21 | chr6 | + | 15-35 | 95848835-95848918 | 0.994249 | Ortholog | 10/28 | 2/35 |
36 | monDom4-43 | Monodelphis domestica | mmu-miR-211 | 21/22 | chr1 | - | 30-51 | 142496646-142496746 | 0.978486 | Ortholog | 10/28 | 2/35 |
37 | monDom4-43 | Monodelphis domestica | bta-miR-211 | 20/21 | chr1 | - | 16-36 | 142496647-142496732 | 0.998163 | Ortholog | 10/28 | 2/35 |
38 | mmu-mir-211 | Mus musculus | mmu-miR-211 | 22/22 | chr7 | + | 26-47 | N/A | - | miRBase_13_0 | 10/28 | 1/35 |
39 | oryCun1-135 | Oryctolagus cuniculus | mmu-miR-211 | 22/22 | scaffold_169032 | - | 14-35 | N/A | 0.97894 | Ortholog | 10/28 | 2/35 |
40 | oryCun1-135 | Oryctolagus cuniculus | bta-miR-211 | 21/21 | scaffold_169032 | - | 14-34 | N/A | 0.975869 | Ortholog | 10/28 | 2/35 |
41 | oryCun1-439 | Oryctolagus cuniculus | bta-miR-211 | 20/21 | scaffold_209315 | - | 16-36 | N/A | 0.996135 | Ortholog | 10/28 | 2/35 |
42 | oryLat2-418 | Oryzias latipes | bta-miR-211 | 20/21 | chr9 | - | 13-33 | 16361103-16361185 | 0.985964 | Ortholog | 10/28 | 1/35 |
43 | otoGar1-246 | Otolemur garnettii | bta-miR-211 | 20/21 | scaffold_119878.1-643825 | + | 15-35 | N/A | 0.995673 | Ortholog | 10/28 | 2/35 |
44 | otoGar1-246 | Otolemur garnettii | mmu-miR-211 | 21/22 | scaffold_119878.1-643825 | + | 15-36 | N/A | 0.996439 | Ortholog | 10/28 | 2/35 |
45 | otoGar1-396 | Otolemur garnettii | bta-miR-211 | 20/21 | scaffold_85742.1-57805 | + | 17-37 | N/A | 0.996135 | Ortholog | 10/28 | 2/35 |
46 | otoGar1-396 | Otolemur garnettii | mmu-miR-211 | 21/22 | scaffold_85742.1-57805 | + | 17-38 | N/A | 0.996203 | Ortholog | 10/28 | 2/35 |
47 | ptr-mir-211 | Pan troglodytes | ptr-miR-211 | 22/22 | chr15_random | - | 26-47 | N/A | - | miRBase_13_0 | 10/28 | 1/35 |
48 | petMar1-106 | Petromyzon marinus | bta-miR-211 | 20/21 | Contig75950 | + | 18-38 | 7229-7315 | 0.990812 | Ortholog | 10/28 | 1/35 |
49 | petMar1-106 | Petromyzon marinus | mmu-miR-211 | 21/22 | Contig75950 | + | 18-39 | 7229-7315 | 0.990779 | Ortholog | 10/28 | 1/35 |
50 | ponAbe2-268 | Pongo abelii | mmu-miR-211 | 21/22 | chr15 | - | 16-37 | 26920752-26920837 | 0.987499 | Ortholog | 10/28 | 1/35 |
51 | ponAbe2-268 | Pongo abelii | bta-miR-211 | 20/21 | chr15 | - | 16-36 | 26920752-26920837 | 0.985 | Ortholog | 10/28 | 1/35 |
52 | ppy-mir-211 | Pongo pygmaeus | ppy-miR-211 | 22/22 | N/A | N/A | 26-47 | N/A | - | miRBase_13_0 | 10/28 | 1/35 |
53 | rno-mir-211 | Rattus norvegicus | rno-miR-211 | 22/22 | chr1 | + | 26-47 | N/A | - | miRBase_13_0 | 10/28 | 1/35 |
54 | taeGut1-37 | Taeniopygia guttata | bta-miR-211 | 20/21 | chr10 | + | 35-55 | 5338505-5338608 | 0.829421 | Ortholog | 10/28 | 1/35 |
55 | taeGut1-37 | Taeniopygia guttata | mmu-miR-211 | 21/22 | chr10 | + | 35-56 | 5338505-5338608 | 0.827251 | Ortholog | 10/28 | 1/35 |
Total | 55 record(s). |