- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-111 | Anolis carolinensis | oan-miR-215* | 20/22 | scaffold_172 | - | 50-69 | 760218-760298 | 0.921134 | Ortholog | 14/30 | 1/35 |
2 | bta-mir-215 | Bos taurus | bta-miR-215 | 22/22 | chrUn.004.2 | + | 12-33 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
3 | calJac1-589 | Callithrix jacchus | oan-miR-215* | 20/22 | Contig6805 | + | 51-71 | 82633-82717 | 0.987064 | Ortholog | 14/30 | 1/35 |
4 | cfa-mir-215 | Canis familiaris | cfa-miR-215 | 22/22 | chr38 | - | 12-33 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
5 | cavPor3-198 | Cavia porcellus | oan-miR-215* | 20/22 | scaffold_13 | + | 51-71 | 2522051-2522134 | 0.998367 | Ortholog | 14/30 | 2/35 |
6 | cavPor3-561 | Cavia porcellus | xtr-miR-215 | 19/21 | scaffold_42 | - | 15-34 | 5717217-5717301 | 0.998269 | Ortholog | 14/30 | 2/35 |
7 | cavPor3-561 | Cavia porcellus | bta-miR-215 | 20/22 | scaffold_42 | - | 15-35 | 5717217-5717301 | 0.998567 | Ortholog | 14/30 | 2/35 |
8 | echTel1-184 | Echinops telfari | oan-miR-215* | 21/22 | scaffold_286232 | + | 51-71 | N/A | 0.989241 | Ortholog | 14/30 | 2/35 |
9 | echTel1-184 | Echinops telfari | bta-miR-215 | 22/22 | scaffold_286232 | + | 13-34 | N/A | 0.994717 | Ortholog | 14/30 | 2/35 |
10 | echTel1-184 | Echinops telfari | mmu-miR-215 | 20/21 | scaffold_286232 | + | 13-33 | N/A | 0.994653 | Ortholog | 14/30 | 2/35 |
11 | echTel1-259 | Echinops telfari | bta-miR-215 | 20/22 | scaffold_303694 | - | 12-32 | N/A | 0.998485 | Ortholog | 14/30 | 2/35 |
12 | equCab1-449 | Equus caballus | oan-miR-215* | 21/22 | chr30 | - | 50-70 | 505843-505924 | 0.99765 | Ortholog | 14/30 | 2/35 |
13 | equCab1-449 | Equus caballus | cfa-miR-215 | 20/22 | chr30 | - | 16-37 | 505841-505927 | 0.999454 | Ortholog | 14/30 | 2/35 |
14 | equCab1-449 | Equus caballus | mmu-miR-215 | 20/21 | chr30 | - | 14-34 | 505842-505925 | 0.999443 | Ortholog | 14/30 | 2/35 |
15 | equCab1-95 | Equus caballus | bta-miR-215 | 20/22 | chr12 | - | 16-36 | 15418161-15418246 | 0.997965 | Ortholog | 14/30 | 2/35 |
16 | equCab1-95 | Equus caballus | xtr-miR-215 | 19/21 | chr12 | - | 16-35 | 15418161-15418246 | 0.997352 | Ortholog | 14/30 | 2/35 |
17 | eriEur1-92 | Erinaceus europaeus | oan-miR-215* | 21/22 | scaffold_295381 | + | 51-71 | N/A | 0.995898 | Ortholog | 14/30 | 1/35 |
18 | felCat3-348 | Felis catus | hsa-miR-215 | 20/21 | scaffold_212046 | - | 14-34 | 161296-161379 | 0.995636 | Ortholog | 14/30 | 1/35 |
19 | felCat3-348 | Felis catus | bta-miR-215 | 21/22 | scaffold_212046 | - | 16-37 | 161295-161381 | 0.99627 | Ortholog | 14/30 | 1/35 |
20 | felCat3-348 | Felis catus | oan-miR-215* | 21/22 | scaffold_212046 | - | 50-70 | 161297-161378 | 0.993251 | Ortholog | 14/30 | 1/35 |
21 | fr2-319 | Fugu rubripes | xtr-miR-215 | 20/21 | chrUn | - | 18-38 | 268717276-268717363 | 0.993863 | Ortholog | 14/30 | 1/35 |
22 | fr2-319 | Fugu rubripes | bta-miR-215 | 21/22 | chrUn | - | 18-39 | 268717276-268717363 | 0.994117 | Ortholog | 14/30 | 1/35 |
23 | fr2-319 | Fugu rubripes | hsa-miR-215 | 19/21 | chrUn | - | 15-33 | 268717277-268717360 | 0.997378 | Ortholog | 14/30 | 1/35 |
24 | gga-mir-215 | Gallus gallus | gga-miR-215 | 21/21 | chr3 | + | 26-46 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
25 | ggo-mir-215 | Gorilla gorilla | ggo-miR-215 | 21/21 | N/A | N/A | 27-47 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
26 | hsa-mir-215 | Homo sapiens | hsa-miR-215 | 21/21 | chr1 | - | 27-47 | 218357818-218357927 | - | miRBase_13_0 | 14/30 | 1/35 |
27 | loxAfr1-332 | Loxodonta africana | hsa-miR-215 | 20/21 | scaffold_641 | - | 14-34 | N/A | 0.996317 | Ortholog | 14/30 | 1/35 |
28 | loxAfr1-332 | Loxodonta africana | bta-miR-215 | 21/22 | scaffold_641 | - | 16-37 | N/A | 0.996784 | Ortholog | 14/30 | 1/35 |
29 | loxAfr1-332 | Loxodonta africana | oan-miR-215* | 21/22 | scaffold_641 | - | 50-70 | N/A | 0.9959 | Ortholog | 14/30 | 1/35 |
30 | mml-mir-215 | Macaca mulatta | mml-miR-215 | 21/21 | chr1 | + | 27-47 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
31 | mne-mir-215 | Macaca nemestrina | mne-miR-215 | 21/21 | N/A | N/A | 27-47 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
32 | monDom4-166 | Monodelphis domestica | oan-miR-215* | 21/22 | chr2 | - | 50-70 | 130471235-130471315 | 0.871145 | Ortholog | 14/30 | 1/35 |
33 | mmu-mir-215 | Mus musculus | mmu-miR-215 | 21/21 | chr1 | + | 30-50 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
34 | oan-mir-215 | Ornithorhynchus anatinus | oan-miR-215* | 22/22 | Contig27098 | + | 66-87 | N/A | - | miRBase_13_0 | 14/30 | 3/35 |
35 | oan-mir-215 | Ornithorhynchus anatinus | oan-miR-215 | 21/21 | Contig27098 | + | 30-50 | N/A | - | miRBase_13_0 | 14/30 | 3/35 |
36 | ornAna1-234 | Ornithorhynchus anatinus | cfa-miR-215 | 20/22 | Ultra67 | - | 17-38 | 6367450-6367537 | 0.998005 | Paralog | 14/30 | 3/35 |
37 | ornAna1-234 | Ornithorhynchus anatinus | oan-miR-215* | 22/22 | Ultra67 | - | 49-70 | 6367453-6367533 | 0.997814 | Paralog | 14/30 | 3/35 |
38 | ornAna1-234 | Ornithorhynchus anatinus | mmu-miR-215 | 20/21 | Ultra67 | - | 16-36 | 6367451-6367536 | 0.997624 | Paralog | 14/30 | 3/35 |
39 | ornAna1-74 | Ornithorhynchus anatinus | oan-miR-215* | 20/22 | Contig13 | - | 49-70 | 3042500-3042588 | 0.965741 | Paralog | 14/30 | 3/35 |
40 | oryCun1-156 | Oryctolagus cuniculus | oan-miR-215* | 21/22 | scaffold_175008 | + | 51-71 | N/A | 0.999661 | Ortholog | 14/30 | 1/35 |
41 | otoGar1-360 | Otolemur garnettii | oan-miR-215* | 21/22 | scaffold_82255.1-109149 | - | 50-70 | N/A | 0.958205 | Ortholog | 14/30 | 1/35 |
42 | ptr-mir-215 | Pan troglodytes | ptr-miR-215 | 21/21 | chr1 | - | 27-47 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
43 | petMar1-6 | Petromyzon marinus | xtr-miR-215 | 19/21 | Contig11149 | - | 13-32 | 19681-19762 | 0.999916 | Ortholog | 14/30 | 1/35 |
44 | ponAbe2-3 | Pongo abelii | mmu-miR-215 | 20/21 | chr1 | + | 26-46 | 29611881-29611975 | 0.817217 | Ortholog | 14/30 | 1/35 |
45 | ponAbe2-3 | Pongo abelii | oan-miR-215* | 20/22 | chr1 | + | 51-71 | 29611893-29611977 | 0.996432 | Ortholog | 14/30 | 1/35 |
46 | ppy-mir-215 | Pongo pygmaeus | ppy-miR-215 | 21/21 | N/A | N/A | 27-47 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
47 | rno-mir-215 | Rattus norvegicus | rno-miR-215 | 21/21 | chr13 | + | 14-34 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
48 | sorAra1-76 | Sorex araneus | hsa-miR-215 | 20/21 | scaffold_228874 | + | 17-37 | N/A | 0.991734 | Ortholog | 14/30 | 1/35 |
49 | sorAra1-76 | Sorex araneus | bta-miR-215 | 21/22 | scaffold_228874 | + | 17-38 | N/A | 0.991885 | Ortholog | 14/30 | 1/35 |
50 | ssc-mir-215 | Sus scrofa | ssc-miR-215 | 21/21 | chr10 | - | 20-40 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
51 | tupBel1-266 | Tupaia belangeri | mmu-miR-215 | 20/21 | scaffold_12585.1-74791 | - | 14-34 | N/A | 0.980642 | Ortholog | 14/30 | 1/35 |
52 | tupBel1-266 | Tupaia belangeri | bta-miR-215 | 21/22 | scaffold_12585.1-74791 | - | 16-37 | N/A | 0.984503 | Ortholog | 14/30 | 1/35 |
53 | tupBel1-266 | Tupaia belangeri | oan-miR-215* | 20/22 | scaffold_12585.1-74791 | - | 50-70 | N/A | 0.822955 | Ortholog | 14/30 | 1/35 |
54 | xtr-mir-215 | Xenopus tropicalis | xtr-miR-215 | 21/21 | scaffold_182 | + | 18-38 | N/A | - | miRBase_13_0 | 14/30 | 1/35 |
Total | 54 record(s). |