- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-216a | Bos taurus | bta-miR-216a | 22/22 | chr11 | - | 19-40 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
2 | bta-mir-216b | Bos taurus | bta-miR-216b | 22/22 | chr11 | - | 11-32 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
3 | bfl-mir-216 | Branchiostoma floridae | bfl-miR-216 | 23/23 | Bf_V2_29 | - | 9-31 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
4 | cfa-mir-216a | Canis familiaris | cfa-miR-216a | 21/21 | chr10 | - | 19-39 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
5 | cfa-mir-216b | Canis familiaris | cfa-miR-216b | 22/22 | chr10 | - | 1-22 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
6 | cap-mir-216a | Capitella sp. | cap-miR-216a | 22/22 | scaffold_192 | - | 9-30 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
7 | cap-mir-216b | Capitella sp. | cap-miR-216b | 22/22 | scaffold_192 | - | 8-29 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
8 | cin-mir-216 | Ciona intestinalis | cin-miR-216 | 23/23 | N/A | N/A | 16-38 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
9 | csa-mir-216a | Ciona savignyi | csa-miR-216a | 23/23 | reftig_16 | + | 16-38 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
10 | csa-mir-216b | Ciona savignyi | csa-miR-216b | 22/22 | reftig_16 | + | 16-37 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
11 | dre-mir-216a-1 | Danio rerio | dre-miR-216a | 22/22 | chr22 | - | 15-36 | N/A | - | miRBase_13_0 | 24/39 | 4/67 |
12 | dre-mir-216a-2 | Danio rerio | dre-miR-216a | 22/22 | chr22 | - | 15-36 | N/A | - | miRBase_13_0 | 24/39 | 4/67 |
13 | dre-mir-216b-1 | Danio rerio | dre-miR-216b | 22/22 | chr22 | - | 11-32 | N/A | - | miRBase_13_0 | 24/39 | 4/67 |
14 | dre-mir-216b-2 | Danio rerio | dre-miR-216b | 22/22 | chr22 | - | 10-31 | N/A | - | miRBase_13_0 | 24/39 | 4/67 |
15 | fru-mir-216a | Fugu rubripes | fru-miR-216a | 22/22 | scaffold_86 | - | 7-28 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
16 | fru-mir-216b | Fugu rubripes | fru-miR-216b | 22/22 | scaffold_86 | - | 9-30 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
17 | gga-mir-216 | Gallus gallus | gga-miR-216 | 21/21 | chr3 | - | 19-39 | N/A | - | miRBase_13_0 | 24/39 | 3/67 |
18 | gga-mir-216b | Gallus gallus | gga-miR-216b | 22/22 | chr3 | - | 16-37 | N/A | - | miRBase_13_0 | 24/39 | 3/67 |
19 | ggo-mir-216 | Gorilla gorilla | ggo-miR-216 | 21/21 | N/A | N/A | 19-39 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
20 | hsa-mir-216a | Homo sapiens | hsa-miR-216a | 22/22 | chr2 | - | 19-40 | 56069589-56069698 | - | miRBase_13_0 | 24/39 | 2/67 |
21 | hsa-mir-216b | Homo sapiens | hsa-miR-216b | 22/22 | chr2 | - | 11-32 | 56081353-56081434 | - | miRBase_13_0 | 24/39 | 2/67 |
22 | lca-mir-216 | Lemur catta | lca-miR-216 | 21/21 | N/A | N/A | 19-39 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
23 | lgi-mir-216a | Lottia gigantea | lgi-miR-216a | 23/23 | sca_22 | + | 15-37 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
24 | lgi-mir-216b | Lottia gigantea | lgi-miR-216b | 23/23 | sca_22 | + | 5-27 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
25 | mml-mir-216a | Macaca mulatta | mml-miR-216a | 22/22 | chr13 | - | 19-40 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
26 | mml-mir-216b | Macaca mulatta | mml-miR-216b | 22/22 | chr13 | - | 11-32 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
27 | mdo-mir-216 | Monodelphis domestica | mdo-miR-216 | 21/21 | chr1 | + | 19-39 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
28 | mmu-mir-216a | Mus musculus | mmu-miR-216a | 22/22 | chr11 | + | 7-28 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
29 | mmu-mir-216b | Mus musculus | mmu-miR-216b | 22/22 | chr11 | + | 14-35 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
30 | oan-mir-216 | Ornithorhynchus anatinus | oan-miR-216* | 20/20 | Ultra56 | - | 70-89 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
31 | oan-mir-216 | Ornithorhynchus anatinus | oan-miR-216 | 22/22 | Ultra56 | - | 30-51 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
32 | ppa-mir-216 | Pan paniscus | ppa-miR-216 | 21/21 | N/A | N/A | 19-39 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
33 | ptr-mir-216a | Pan troglodytes | ptr-miR-216a | 21/21 | chr2a | - | 18-38 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
34 | ptr-mir-216b | Pan troglodytes | ptr-miR-216b | 22/22 | chr2a | - | 11-32 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
35 | ppy-mir-216 | Pongo pygmaeus | ppy-miR-216 | 21/21 | N/A | N/A | 19-39 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
36 | rno-mir-216a | Rattus norvegicus | rno-miR-216a | 22/22 | chr14 | + | 19-40 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
37 | ssc-mir-216 | Sus scrofa | ssc-miR-216 | 21/21 | chr3 | + | 19-39 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
38 | tni-mir-216a | Tetraodon nigroviridis | tni-miR-216a | 22/22 | chr17 | + | 7-28 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
39 | tni-mir-216b | Tetraodon nigroviridis | tni-miR-216b | 22/22 | chr17 | + | 9-30 | N/A | - | miRBase_13_0 | 24/39 | 2/67 |
40 | xtr-mir-216 | Xenopus tropicalis | xtr-miR-216 | 21/21 | scaffold_242 | + | 17-37 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
Total | 40 record(s). |