- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | aga-mir-219 | Anopheles gambiae | aga-miR-219 | 23/23 | chr2L | - | 11-33 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
2 | ame-mir-219 | Apis mellifera | ame-miR-219 | 23/23 | Group11.1 | - | 20-42 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
3 | bta-mir-219 | Bos taurus | bta-miR-219 | 23/23 | chr11 | + | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
4 | bfl-mir-219 | Branchiostoma floridae | bfl-miR-219 | 21/21 | Bf_V2_250 | + | 8-28 | N/A | - | miRBase_13_0 | 38/52 | 3/89 |
5 | cfa-mir-219-1 | Canis familiaris | cfa-miR-219 | 21/21 | chr12 | + | 1-21 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
6 | cfa-mir-219-2 | Canis familiaris | cfa-miR-219 | 21/21 | chr9 | + | 1-21 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
7 | cfa-mir-219-2 | Canis familiaris | cfa-miR-219* | 22/22 | chr9 | + | 44-65 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
8 | cap-mir-219 | Capitella sp. | cap-miR-219 | 21/21 | scaffold_273 | + | 19-39 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
9 | cin-mir-219 | Ciona intestinalis | cin-miR-219 | 23/23 | chr7q | + | 16-38 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
10 | csa-mir-219 | Ciona savignyi | csa-miR-219 | 21/21 | reftig_67 | + | 16-36 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
11 | dre-mir-219-1 | Danio rerio | dre-miR-219 | 22/22 | chr10 | - | 15-36 | N/A | - | miRBase_13_0 | 38/52 | 3/89 |
12 | dre-mir-219-2 | Danio rerio | dre-miR-219 | 22/22 | chr5 | + | 1-22 | N/A | - | miRBase_13_0 | 38/52 | 3/89 |
13 | dre-mir-219-3 | Danio rerio | dre-miR-219 | 22/22 | chr19 | - | 49-70 | N/A | - | miRBase_13_0 | 38/52 | 3/89 |
14 | dan-mir-219 | Drosophila ananassae | dan-miR-219 | 23/23 | N/A | N/A | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
15 | der-mir-219 | Drosophila erecta | der-miR-219 | 23/23 | N/A | N/A | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
16 | dgr-mir-219 | Drosophila grimshawi | dgr-miR-219 | 23/23 | N/A | N/A | 18-40 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
17 | dme-mir-219 | Drosophila melanogaster | dme-miR-219 | 23/23 | chr3L | + | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
18 | dmo-mir-219 | Drosophila mojavensis | dmo-miR-219 | 23/23 | N/A | N/A | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
19 | dpe-mir-219 | Drosophila persimilis | dpe-miR-219 | 23/23 | N/A | N/A | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
20 | dps-mir-219 | Drosophila pseudoobscura | dps-miR-219 | 23/23 | chrXR_group6 | - | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
21 | dse-mir-219 | Drosophila sechellia | dse-miR-219 | 23/23 | N/A | N/A | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
22 | dsi-mir-219 | Drosophila simulans | dsi-miR-219 | 23/23 | N/A | N/A | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
23 | dvi-mir-219 | Drosophila virilis | dvi-miR-219 | 23/23 | N/A | N/A | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
24 | dwi-mir-219 | Drosophila willistoni | dwi-miR-219 | 23/23 | N/A | N/A | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
25 | dya-mir-219 | Drosophila yakuba | dya-miR-219 | 23/23 | N/A | N/A | 19-41 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
26 | fru-mir-219-1 | Fugu rubripes | fru-miR-219 | 22/22 | scaffold_7 | - | 1-22 | N/A | - | miRBase_13_0 | 38/52 | 4/89 |
27 | fru-mir-219-2 | Fugu rubripes | fru-miR-219 | 22/22 | scaffold_523 | - | 8-29 | N/A | - | miRBase_13_0 | 38/52 | 4/89 |
28 | gga-mir-219 | Gallus gallus | gga-miR-219 | 21/21 | chr17 | + | 10-30 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
29 | ggo-mir-219 | Gorilla gorilla | ggo-miR-219 | 21/21 | N/A | N/A | 21-41 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
30 | hsa-mir-219-1 | Homo sapiens | hsa-miR-219-5p | 21/21 | chr6 | + | 21-41 | 33283590-33283699 | - | miRBase_13_0 | 38/52 | 2/89 |
31 | hsa-mir-219-1 | Homo sapiens | hsa-miR-219-1-3p | 22/22 | chr6 | + | 62-83 | 33283590-33283699 | - | miRBase_13_0 | 38/52 | 2/89 |
32 | hsa-mir-219-2 | Homo sapiens | hsa-miR-219-5p | 21/21 | chr9 | - | 19-39 | 130194718-130194814 | - | miRBase_13_0 | 38/52 | 2/89 |
33 | hsa-mir-219-2 | Homo sapiens | hsa-miR-219-2-3p | 22/22 | chr9 | - | 62-83 | 130194718-130194814 | - | miRBase_13_0 | 38/52 | 2/89 |
34 | mml-mir-219-1 | Macaca mulatta | mml-miR-219 | 21/21 | chr4 | + | 21-41 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
35 | mml-mir-219-2 | Macaca mulatta | mml-miR-219-5p | 21/21 | chr15 | + | 19-39 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
36 | mml-mir-219-2 | Macaca mulatta | mml-miR-219-3p | 22/22 | chr15 | + | 62-83 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
37 | mdo-mir-219 | Monodelphis domestica | mdo-miR-219 | 21/21 | chr1 | - | 16-36 | N/A | - | miRBase_13_0 | 38/52 | 3/89 |
38 | mmu-mir-219-1 | Mus musculus | mmu-miR-219 | 21/21 | chr17 | - | 21-41 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
39 | mmu-mir-219-2 | Mus musculus | mmu-miR-219 | 21/21 | chr2 | - | 19-39 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
40 | odi-mir-219 | Oikopleura dioica | odi-miR-219 | 21/21 | N/A | N/A | 16-36 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
41 | oan-mir-219 | Ornithorhynchus anatinus | oan-miR-219 | 22/22 | Contig12675 | - | 74-95 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
42 | oan-mir-219 | Ornithorhynchus anatinus | oan-miR-219* | 23/23 | Contig12675 | - | 31-53 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
43 | ptr-mir-219-1 | Pan troglodytes | ptr-miR-219-5p | 21/21 | chr6 | + | 20-40 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
44 | ptr-mir-219-1 | Pan troglodytes | ptr-miR-219-1-3p | 22/22 | chr6 | + | 61-82 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
45 | ptr-mir-219-2 | Pan troglodytes | ptr-miR-219-2-3p | 22/22 | chr9 | - | 62-83 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
46 | ptr-mir-219-2 | Pan troglodytes | ptr-miR-219-5p | 21/21 | chr9 | - | 19-39 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
47 | ppy-mir-219 | Pongo pygmaeus | ppy-miR-219 | 21/21 | N/A | N/A | 21-41 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
48 | rno-mir-219-1 | Rattus norvegicus | rno-miR-219-1-3p | 22/22 | chr20 | + | 62-83 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
49 | rno-mir-219-1 | Rattus norvegicus | rno-miR-219-5p | 21/21 | chr20 | + | 21-41 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
50 | rno-mir-219-2 | Rattus norvegicus | rno-miR-219-2-3p | 22/22 | chr3 | - | 62-83 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
51 | rno-mir-219-2 | Rattus norvegicus | rno-miR-219-5p | 21/21 | chr3 | - | 19-39 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
52 | sme-mir-219 | Schmidtea mediterranea | sme-miR-219 | 23/23 | Contig2622.2 | - | 15-37 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
53 | spu-mir-219 | Strongylocentrotus purpuratus | spu-miR-219 | 23/23 | N/A | N/A | 21-43 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
54 | tni-mir-219-1 | Tetraodon nigroviridis | tni-miR-219 | 22/22 | chr12 | - | 17-38 | N/A | - | miRBase_13_0 | 38/52 | 4/89 |
55 | tni-mir-219-2 | Tetraodon nigroviridis | tni-miR-219 | 22/22 | chrUn_random | + | 8-29 | N/A | - | miRBase_13_0 | 38/52 | 4/89 |
56 | tca-mir-219 | Tribolium castaneum | tca-miR-219 | 23/23 | CM000278.1 | + | 11-33 | N/A | - | miRBase_13_0 | 38/52 | 2/89 |
57 | xtr-mir-219 | Xenopus tropicalis | xtr-miR-219 | 21/21 | scaffold_1845 | + | 17-37 | N/A | - | miRBase_13_0 | 38/52 | 1/89 |
Total | 57 record(s). |