- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-220a | Bos taurus | bta-miR-220a | 22/22 | chr7 | - | 23-44 | N/A | - | miRBase_13_0 | 10/14 | 6/27 |
2 | bta-mir-220b | Bos taurus | bta-miR-220b | 21/21 | chr24 | - | 23-43 | N/A | - | miRBase_13_0 | 10/14 | 6/27 |
3 | bta-mir-220c-1 | Bos taurus | bta-miR-220c | 22/22 | chr23 | - | 23-44 | N/A | - | miRBase_13_0 | 10/14 | 6/27 |
4 | bta-mir-220c-2 | Bos taurus | bta-miR-220c | 22/22 | chr23 | - | 23-44 | N/A | - | miRBase_13_0 | 10/14 | 6/27 |
5 | bta-mir-220d | Bos taurus | bta-miR-220d | 21/21 | chr18 | - | 11-31 | N/A | - | miRBase_13_0 | 10/14 | 6/27 |
6 | bta-mir-220e | Bos taurus | bta-miR-220e | 21/21 | chr13 | + | 23-43 | N/A | - | miRBase_13_0 | 10/14 | 6/27 |
7 | cfa-mir-220a | Canis familiaris | cfa-miR-220a | 21/21 | chr5 | + | 11-31 | N/A | - | miRBase_13_0 | 10/14 | 2/27 |
8 | cfa-mir-220b | Canis familiaris | cfa-miR-220b | 21/21 | chr7 | - | 11-31 | N/A | - | miRBase_13_0 | 10/14 | 2/27 |
9 | dre-mir-220 | Danio rerio | dre-miR-220 | 21/21 | Zv7_scaffold2597 | - | 23-43 | N/A | - | miRBase_13_0 | 10/14 | 1/27 |
10 | equCab1-535 | Equus caballus | bta-miR-220a | 20/22 | chr7 | + | 51-72 | 653450-653534 | 0.965964 | Ortholog | 10/14 | 1/27 |
11 | equCab1-535 | Equus caballus | cfa-miR-220a | 20/21 | chr7 | + | 51-71 | 653450-653534 | 0.976908 | Ortholog | 10/14 | 1/27 |
12 | fr2-284 | Fugu rubripes | cfa-miR-220a | 19/21 | chrUn | - | 9-29 | 208332171-208332249 | 0.840298 | Ortholog | 10/14 | 1/27 |
13 | fr2-284 | Fugu rubripes | bta-miR-220a | 20/22 | chrUn | - | 7-28 | 208332170-208332247 | 0.909575 | Ortholog | 10/14 | 1/27 |
14 | gasAcu1-215 | Gasterosteus aculeatus | cfa-miR-220a | 19/21 | chrIX | + | 51-71 | 14691048-14691137 | 0.817932 | Ortholog | 10/14 | 1/27 |
15 | ggo-mir-220 | Gorilla gorilla | ggo-miR-220 | 21/21 | N/A | N/A | 23-43 | N/A | - | miRBase_13_0 | 10/14 | 1/27 |
16 | hsa-mir-220a | Homo sapiens | hsa-miR-220a | 21/21 | chrX | - | 23-43 | 122523627-122523736 | - | miRBase_13_0 | 10/14 | 3/27 |
17 | hsa-mir-220b | Homo sapiens | hsa-miR-220b | 21/21 | chr19 | + | 11-31 | 6446959-6447045 | - | miRBase_13_0 | 10/14 | 3/27 |
18 | hsa-mir-220c | Homo sapiens | hsa-miR-220c | 22/22 | chr19 | - | 11-32 | 53755341-53755423 | - | miRBase_13_0 | 10/14 | 3/27 |
19 | mml-mir-220a | Macaca mulatta | mml-miR-220a | 22/22 | chrX | - | 23-44 | N/A | - | miRBase_13_0 | 10/14 | 5/27 |
20 | mml-mir-220b | Macaca mulatta | mml-miR-220b | 21/21 | chr18 | + | 23-43 | N/A | - | miRBase_13_0 | 10/14 | 5/27 |
21 | mml-mir-220c | Macaca mulatta | mml-miR-220c | 22/22 | chr20 | - | 23-44 | N/A | - | miRBase_13_0 | 10/14 | 5/27 |
22 | mml-mir-220d | Macaca mulatta | mml-miR-220d | 22/22 | 1099214771041 | - | 17-38 | N/A | - | miRBase_13_0 | 10/14 | 5/27 |
23 | rheMac2-103 | Macaca mulatta | cfa-miR-220a | 20/21 | chr15 | + | 51-71 | 1000082-1000175 | 0.921688 | Paralog | 10/14 | 5/27 |
24 | rheMac2-103 | Macaca mulatta | bta-miR-220a | 20/22 | chr15 | + | 51-72 | 1000082-1000175 | 0.953332 | Paralog | 10/14 | 5/27 |
25 | mne-mir-220 | Macaca nemestrina | mne-miR-220 | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 10/14 | 1/27 |
26 | mmu-mir-220 | Mus musculus | mmu-miR-220 | 21/21 | chr6 | - | 11-31 | N/A | - | miRBase_13_0 | 10/14 | 1/27 |
27 | ppa-mir-220 | Pan paniscus | ppa-miR-220 | 21/21 | N/A | N/A | 23-43 | N/A | - | miRBase_13_0 | 10/14 | 1/27 |
28 | ptr-mir-220a | Pan troglodytes | ptr-miR-220a | 21/21 | chrX | - | 23-43 | N/A | - | miRBase_13_0 | 10/14 | 2/27 |
29 | ptr-mir-220b | Pan troglodytes | ptr-miR-220b | 21/21 | chr19 | + | 10-30 | N/A | - | miRBase_13_0 | 10/14 | 2/27 |
30 | ponAbe2-770 | Pongo abelii | mml-miR-220c | 22/22 | chr9 | - | 48-69 | 134265961-134266045 | 0.91244 | Ortholog | 10/14 | 1/27 |
31 | ponAbe2-770 | Pongo abelii | cfa-miR-220a | 20/21 | chr9 | - | 50-70 | 134265957-134266047 | 0.822245 | Ortholog | 10/14 | 1/27 |
Total | 31 record(s). |