- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-40 | Anolis carolinensis | bta-miR-221 | 22/22 | scaffold_118 | + | 51-72 | 1316438-1316521 | 0.999508 | Ortholog | 18/27 | 1/31 |
2 | anoCar1-40 | Anolis carolinensis | hsa-miR-221 | 23/23 | scaffold_118 | + | 50-72 | 1316439-1316521 | 0.999172 | Ortholog | 18/27 | 1/31 |
3 | bta-mir-221 | Bos taurus | bta-miR-221 | 22/22 | chrX | + | 65-86 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
4 | cfa-mir-221 | Canis familiaris | cfa-miR-221 | 22/22 | chrX | - | 41-62 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
5 | cavPor3-391 | Cavia porcellus | oan-miR-221* | 19/21 | scaffold_25 | - | 45-64 | 3806372-3806445 | 0.972478 | Ortholog | 18/27 | 2/31 |
6 | cavPor3-478 | Cavia porcellus | bta-miR-221 | 22/22 | scaffold_33 | + | 51-72 | 12035264-12035346 | 0.999019 | Ortholog | 18/27 | 2/31 |
7 | cavPor3-478 | Cavia porcellus | oan-miR-221* | 19/21 | scaffold_33 | + | 8-26 | 12035267-12035341 | 0.995189 | Ortholog | 18/27 | 2/31 |
8 | cavPor3-478 | Cavia porcellus | hsa-miR-221* | 22/22 | scaffold_33 | + | 10-31 | 12035265-12035343 | 0.99951 | Ortholog | 18/27 | 2/31 |
9 | cavPor3-478 | Cavia porcellus | hsa-miR-221 | 23/23 | scaffold_33 | + | 50-72 | 12035265-12035344 | 0.997815 | Ortholog | 18/27 | 2/31 |
10 | dre-mir-221 | Danio rerio | dre-miR-221 | 23/23 | chr9 | - | 48-70 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
11 | equCab1-770 | Equus caballus | oan-miR-221* | 19/21 | chrX | - | 10-28 | 27229974-27230052 | 0.993609 | Ortholog | 18/27 | 1/31 |
12 | equCab1-770 | Equus caballus | hsa-miR-221* | 22/22 | chrX | - | 16-37 | 27229972-27230058 | 0.999067 | Ortholog | 18/27 | 1/31 |
13 | equCab1-770 | Equus caballus | bta-miR-221 | 22/22 | chrX | - | 49-70 | 27229974-27230051 | 0.997999 | Ortholog | 18/27 | 1/31 |
14 | equCab1-770 | Equus caballus | hsa-miR-221 | 23/23 | chrX | - | 49-71 | 27229974-27230051 | 0.995026 | Ortholog | 18/27 | 1/31 |
15 | fr2-37 | Fugu rubripes | bta-miR-221 | 22/22 | chrUn | + | 51-72 | 83946976-83947060 | 0.996039 | Paralog | 18/27 | 3/31 |
16 | fr2-37 | Fugu rubripes | fru-miR-221 | 23/23 | chrUn | + | 50-72 | 83946977-83947060 | 0.992945 | Paralog | 18/27 | 3/31 |
17 | fr2-76 | Fugu rubripes | oan-miR-221* | 19/21 | chrUn | + | 8-26 | 153868624-153868698 | 0.98689 | Paralog | 18/27 | 3/31 |
18 | fr2-76 | Fugu rubripes | hsa-miR-221* | 22/22 | chrUn | + | 10-31 | 153868622-153868700 | 0.998199 | Paralog | 18/27 | 3/31 |
19 | fru-mir-221 | Fugu rubripes | fru-miR-221 | 23/23 | scaffold_81 | + | 47-69 | N/A | - | miRBase_13_0 | 18/27 | 3/31 |
20 | gga-mir-221 | Gallus gallus | gga-miR-221 | 23/23 | chr1 | + | 64-86 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
21 | gasAcu1-27 | Gasterosteus aculeatus | bta-miR-221 | 22/22 | chrI | - | 49-70 | 25004577-25004662 | 0.996431 | Ortholog | 18/27 | 1/31 |
22 | gasAcu1-27 | Gasterosteus aculeatus | hsa-miR-221 | 23/23 | chrI | - | 49-71 | 25004577-25004662 | 0.993175 | Ortholog | 18/27 | 1/31 |
23 | ggo-mir-221 | Gorilla gorilla | ggo-miR-221 | 23/23 | N/A | N/A | 65-87 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
24 | hsa-mir-221 | Homo sapiens | hsa-miR-221 | 23/23 | chrX | - | 65-87 | 45490529-45490638 | - | miRBase_13_0 | 18/27 | 1/31 |
25 | hsa-mir-221 | Homo sapiens | hsa-miR-221* | 22/22 | chrX | - | 25-46 | 45490529-45490638 | - | miRBase_13_0 | 18/27 | 1/31 |
26 | loxAfr1-289 | Loxodonta africana | hsa-miR-221 | 23/23 | scaffold_52257 | - | 49-71 | N/A | 0.997472 | Ortholog | 18/27 | 1/31 |
27 | loxAfr1-289 | Loxodonta africana | bta-miR-221 | 22/22 | scaffold_52257 | - | 49-70 | N/A | 0.998941 | Ortholog | 18/27 | 1/31 |
28 | mml-mir-221 | Macaca mulatta | mml-miR-221 | 23/23 | chrX | - | 65-87 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
29 | mdo-mir-221 | Monodelphis domestica | mdo-miR-221 | 23/23 | chr4 | + | 47-69 | N/A | - | miRBase_13_0 | 18/27 | 2/31 |
30 | monDom4-285 | Monodelphis domestica | mdo-miR-221 | 23/23 | chr4 | + | 50-72 | 17427277-17427356 | 0.987205 | Paralog | 18/27 | 2/31 |
31 | monDom4-285 | Monodelphis domestica | bta-miR-221 | 22/22 | chr4 | + | 51-72 | 17427276-17427358 | 0.993 | Paralog | 18/27 | 2/31 |
32 | mmu-mir-221 | Mus musculus | mmu-miR-221 | 23/23 | chrX | - | 60-82 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
33 | oan-mir-221 | Ornithorhynchus anatinus | oan-miR-221 | 22/22 | Ultra222 | + | 59-80 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
34 | oan-mir-221 | Ornithorhynchus anatinus | oan-miR-221* | 21/21 | Ultra222 | + | 19-39 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
35 | oryCun1-442 | Oryctolagus cuniculus | hsa-miR-221* | 22/22 | scaffold_209882 | + | 10-31 | N/A | 0.999302 | Ortholog | 18/27 | 1/31 |
36 | oryLat2-199 | Oryzias latipes | oan-miR-221* | 19/21 | chr2 | - | 11-31 | 28254379-28254459 | 0.999819 | Ortholog | 18/27 | 1/31 |
37 | oryLat2-199 | Oryzias latipes | bta-miR-221 | 22/22 | chr2 | - | 49-70 | 28254381-28254457 | 0.999774 | Ortholog | 18/27 | 1/31 |
38 | oryLat2-199 | Oryzias latipes | hsa-miR-221 | 23/23 | chr2 | - | 49-71 | 28254381-28254457 | 0.999461 | Ortholog | 18/27 | 1/31 |
39 | otoGar1-215 | Otolemur garnettii | hsa-miR-221* | 21/22 | scaffold_118079.1-30889 | - | 16-37 | N/A | 0.99943 | Ortholog | 18/27 | 1/31 |
40 | otoGar1-215 | Otolemur garnettii | bta-miR-221 | 22/22 | scaffold_118079.1-30889 | - | 49-70 | N/A | 0.998762 | Ortholog | 18/27 | 1/31 |
41 | otoGar1-215 | Otolemur garnettii | hsa-miR-221 | 23/23 | scaffold_118079.1-30889 | - | 49-71 | N/A | 0.997229 | Ortholog | 18/27 | 1/31 |
42 | ppa-mir-221 | Pan paniscus | ppa-miR-221 | 23/23 | N/A | N/A | 65-87 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
43 | ptr-mir-221 | Pan troglodytes | ptr-miR-221 | 23/23 | chrX | - | 65-87 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
44 | ponAbe2-791 | Pongo abelii | bta-miR-221 | 22/22 | chrX | - | 49-70 | 46470836-46470913 | 0.99744 | Ortholog | 18/27 | 1/31 |
45 | ponAbe2-791 | Pongo abelii | hsa-miR-221 | 23/23 | chrX | - | 49-71 | 46470836-46470913 | 0.993647 | Ortholog | 18/27 | 1/31 |
46 | ppy-mir-221 | Pongo pygmaeus | ppy-miR-221 | 23/23 | N/A | N/A | 65-87 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
47 | rno-mir-221 | Rattus norvegicus | rno-miR-221 | 23/23 | chrX | + | 65-87 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
48 | ssc-mir-221 | Sus scrofa | ssc-miR-221 | 22/22 | chrX | - | 44-65 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
49 | tni-mir-221 | Tetraodon nigroviridis | tni-miR-221 | 23/23 | chrUn_random | - | 47-69 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
50 | xtr-mir-221 | Xenopus tropicalis | xtr-miR-221 | 23/23 | scaffold_169 | + | 59-81 | N/A | - | miRBase_13_0 | 18/27 | 1/31 |
Total | 50 record(s). |