- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-37 | Anolis carolinensis | oan-miR-222a* | 21/22 | scaffold_118 | + | 11-31 | 1315494-1315573 | 0.99984 | Ortholog | 14/31 | 1/40 |
2 | anoCar1-37 | Anolis carolinensis | gga-miR-222 | 24/24 | scaffold_118 | + | 50-73 | 1315494-1315575 | 0.998395 | Ortholog | 14/31 | 1/40 |
3 | anoCar1-37 | Anolis carolinensis | hsa-miR-222 | 21/21 | scaffold_118 | + | 51-71 | 1315493-1315574 | 0.999645 | Ortholog | 14/31 | 1/40 |
4 | anoCar1-37 | Anolis carolinensis | hsa-miR-222* | 20/22 | scaffold_118 | + | 16-37 | 1315491-1315575 | 0.999975 | Ortholog | 14/31 | 1/40 |
5 | age-mir-222 | Ateles geoffroyi | age-miR-222 | 24/24 | N/A | N/A | 69-92 | N/A | - | miRBase_13_0 | 14/31 | 1/40 |
6 | bta-mir-222 | Bos taurus | bta-miR-222 | 21/21 | chrX | + | 69-89 | N/A | - | miRBase_13_0 | 14/31 | 1/40 |
7 | calJac1-632 | Callithrix jacchus | hsa-miR-222 | 21/21 | Contig761 | - | 49-69 | 302475-302552 | 0.999196 | Ortholog | 14/31 | 1/40 |
8 | calJac1-632 | Callithrix jacchus | hsa-miR-222* | 22/22 | Contig761 | - | 15-36 | 302471-302556 | 0.999573 | Ortholog | 14/31 | 1/40 |
9 | calJac1-632 | Callithrix jacchus | oan-miR-222a* | 20/22 | Contig761 | - | 12-32 | 302473-302554 | 0.998375 | Ortholog | 14/31 | 1/40 |
10 | cfa-mir-222 | Canis familiaris | cfa-miR-222 | 21/21 | chrX | - | 49-69 | N/A | - | miRBase_13_0 | 14/31 | 1/40 |
11 | cavPor3-475 | Cavia porcellus | hsa-miR-222* | 22/22 | scaffold_33 | + | 13-34 | 12034574-12034655 | 0.999631 | Ortholog | 14/31 | 1/40 |
12 | cavPor3-475 | Cavia porcellus | gga-miR-222 | 24/24 | scaffold_33 | + | 46-69 | 12034579-12034650 | 0.996464 | Ortholog | 14/31 | 1/40 |
13 | cavPor3-475 | Cavia porcellus | hsa-miR-222 | 21/21 | scaffold_33 | + | 51-71 | 12034574-12034655 | 0.99943 | Ortholog | 14/31 | 1/40 |
14 | cavPor3-475 | Cavia porcellus | oan-miR-222a* | 20/22 | scaffold_33 | + | 14-34 | 12034572-12034654 | 0.999301 | Ortholog | 14/31 | 1/40 |
15 | danRer5-286 | Danio rerio | hsa-miR-222 | 20/21 | chr6 | - | 50-70 | 59071366-59071451 | 0.935565 | Paralog | 14/31 | 2/40 |
16 | dre-mir-222 | Danio rerio | dre-miR-222 | 24/24 | chr9 | - | 68-91 | N/A | - | miRBase_13_0 | 14/31 | 2/40 |
17 | dasNov1-15 | Dasypus novemcinctus | hsa-miR-222* | 22/22 | scaffold_1126 | - | 16-37 | N/A | 0.999328 | Ortholog | 14/31 | 1/40 |
18 | dasNov1-15 | Dasypus novemcinctus | oan-miR-222a* | 20/22 | scaffold_1126 | - | 13-33 | N/A | 0.997224 | Ortholog | 14/31 | 1/40 |
19 | dasNov1-15 | Dasypus novemcinctus | hsa-miR-222 | 21/21 | scaffold_1126 | - | 48-68 | N/A | 0.998917 | Ortholog | 14/31 | 1/40 |
20 | dasNov1-15 | Dasypus novemcinctus | gga-miR-222 | 24/24 | scaffold_1126 | - | 48-71 | N/A | 0.996283 | Ortholog | 14/31 | 1/40 |
21 | echTel1-240 | Echinops telfari | hsa-miR-222 | 21/21 | scaffold_301248 | + | 51-71 | N/A | 0.998999 | Ortholog | 14/31 | 1/40 |
22 | echTel1-240 | Echinops telfari | oan-miR-222a* | 20/22 | scaffold_301248 | + | 51-71 | N/A | 0.942278 | Ortholog | 14/31 | 1/40 |
23 | echTel1-240 | Echinops telfari | gga-miR-222 | 24/24 | scaffold_301248 | + | 50-73 | N/A | 0.995226 | Ortholog | 14/31 | 1/40 |
24 | echTel1-240 | Echinops telfari | hsa-miR-222* | 22/22 | scaffold_301248 | + | 14-35 | N/A | 0.9994 | Ortholog | 14/31 | 1/40 |
25 | equCab1-772 | Equus caballus | hsa-miR-222* | 22/22 | chrX | - | 15-36 | 27230745-27230830 | 0.999573 | Ortholog | 14/31 | 1/40 |
26 | equCab1-772 | Equus caballus | gga-miR-222 | 24/24 | chrX | - | 48-71 | 27230749-27230825 | 0.997133 | Ortholog | 14/31 | 1/40 |
27 | equCab1-772 | Equus caballus | hsa-miR-222 | 21/21 | chrX | - | 49-69 | 27230749-27230826 | 0.999196 | Ortholog | 14/31 | 1/40 |
28 | eriEur1-291 | Erinaceus europaeus | hsa-miR-222* | 21/22 | scaffold_372987 | - | 15-36 | N/A | 0.99984 | Ortholog | 14/31 | 1/40 |
29 | eriEur1-291 | Erinaceus europaeus | hsa-miR-222 | 21/21 | scaffold_372987 | - | 50-70 | N/A | 0.998701 | Ortholog | 14/31 | 1/40 |
30 | eriEur1-291 | Erinaceus europaeus | oan-miR-222a* | 21/22 | scaffold_372987 | - | 12-32 | N/A | 0.99942 | Ortholog | 14/31 | 1/40 |
31 | eriEur1-291 | Erinaceus europaeus | gga-miR-222 | 24/24 | scaffold_372987 | - | 48-71 | N/A | 0.992607 | Ortholog | 14/31 | 1/40 |
32 | felCat3-298 | Felis catus | hsa-miR-222 | 21/21 | scaffold_203036 | - | 49-69 | 396-473 | 0.999196 | Ortholog | 14/31 | 1/40 |
33 | felCat3-298 | Felis catus | oan-miR-222a* | 20/22 | scaffold_203036 | - | 12-32 | 394-475 | 0.998375 | Ortholog | 14/31 | 1/40 |
34 | felCat3-298 | Felis catus | hsa-miR-222* | 22/22 | scaffold_203036 | - | 15-36 | 392-477 | 0.999573 | Ortholog | 14/31 | 1/40 |
35 | fr2-75 | Fugu rubripes | fru-miR-222 | 24/24 | chrUn | + | 47-70 | 153868340-153868415 | 0.998554 | Paralog | 14/31 | 2/40 |
36 | fr2-75 | Fugu rubripes | hsa-miR-222 | 21/21 | chrUn | + | 47-67 | 153868340-153868415 | 0.999248 | Paralog | 14/31 | 2/40 |
37 | fru-mir-222 | Fugu rubripes | fru-miR-222 | 24/24 | scaffold_81 | + | 44-67 | N/A | - | miRBase_13_0 | 14/31 | 2/40 |
38 | galGal3-63 | Gallus gallus | oan-miR-222b | 23/23 | chr4 | + | 50-72 | 2151189-2151266 | 0.991558 | Paralog | 14/31 | 2/40 |
39 | gga-mir-222 | Gallus gallus | gga-miR-222 | 24/24 | chr1 | + | 57-80 | N/A | - | miRBase_13_0 | 14/31 | 2/40 |
40 | gasAcu1-28 | Gasterosteus aculeatus | hsa-miR-222 | 21/21 | chrI | - | 50-70 | 25004799-25004882 | 0.999722 | Ortholog | 14/31 | 2/40 |
41 | gasAcu1-28 | Gasterosteus aculeatus | oan-miR-222a* | 21/22 | chrI | - | 15-35 | 25004800-25004884 | 0.999705 | Ortholog | 14/31 | 2/40 |
42 | gasAcu1-28 | Gasterosteus aculeatus | gga-miR-222 | 24/24 | chrI | - | 47-70 | 25004804-25004879 | 0.999364 | Ortholog | 14/31 | 2/40 |
43 | gasAcu1-28 | Gasterosteus aculeatus | hsa-miR-222* | 21/22 | chrI | - | 17-38 | 25004799-25004885 | 0.999919 | Ortholog | 14/31 | 2/40 |
44 | gasAcu1-605 | Gasterosteus aculeatus | gga-miR-222 | 24/24 | chrXVI | + | 50-73 | 18014346-18014429 | 0.999321 | Ortholog | 14/31 | 2/40 |
45 | gasAcu1-605 | Gasterosteus aculeatus | hsa-miR-222 | 21/21 | chrXVI | + | 51-71 | 18014345-18014430 | 0.999595 | Ortholog | 14/31 | 2/40 |
46 | hsa-mir-222 | Homo sapiens | hsa-miR-222 | 21/21 | chrX | - | 69-89 | 45491365-45491474 | - | miRBase_13_0 | 14/31 | 1/40 |
47 | hsa-mir-222 | Homo sapiens | hsa-miR-222* | 22/22 | chrX | - | 31-52 | 45491365-45491474 | - | miRBase_13_0 | 14/31 | 1/40 |
48 | loxAfr1-290 | Loxodonta africana | gga-miR-222 | 24/24 | scaffold_52257 | - | 48-71 | N/A | 0.992955 | Ortholog | 14/31 | 1/40 |
49 | loxAfr1-290 | Loxodonta africana | hsa-miR-222 | 21/21 | scaffold_52257 | - | 49-69 | N/A | 0.997989 | Ortholog | 14/31 | 1/40 |
50 | loxAfr1-290 | Loxodonta africana | hsa-miR-222* | 21/22 | scaffold_52257 | - | 16-37 | N/A | 0.999757 | Ortholog | 14/31 | 1/40 |
51 | mml-mir-222 | Macaca mulatta | mml-miR-222 | 21/21 | chrX | - | 69-89 | N/A | - | miRBase_13_0 | 14/31 | 1/40 |
52 | mdo-mir-222a | Monodelphis domestica | mdo-miR-222a | 24/24 | chr4 | + | 27-50 | N/A | - | miRBase_13_0 | 14/31 | 2/40 |
53 | monDom4-282 | Monodelphis domestica | mdo-miR-222a | 24/24 | chr4 | + | 50-73 | 17426693-17426773 | 0.972181 | Paralog | 14/31 | 2/40 |
54 | monDom4-282 | Monodelphis domestica | hsa-miR-222 | 21/21 | chr4 | + | 51-71 | 17426692-17426774 | 0.992551 | Paralog | 14/31 | 2/40 |
55 | monDom4-282 | Monodelphis domestica | oan-miR-222a* | 21/22 | chr4 | + | 9-29 | 17426694-17426771 | 0.996178 | Paralog | 14/31 | 2/40 |
56 | mm9-25 | Mus musculus | hsa-miR-222* | 20/22 | chr1 | - | 20-41 | 12765762-12765852 | 0.996168 | Paralog | 14/31 | 2/40 |
57 | mmu-mir-222 | Mus musculus | mmu-miR-222 | 21/21 | chrX | - | 49-69 | N/A | - | miRBase_13_0 | 14/31 | 2/40 |
58 | oan-mir-222a | Ornithorhynchus anatinus | oan-miR-222a* | 22/22 | Ultra222 | + | 26-47 | N/A | - | miRBase_13_0 | 14/31 | 3/40 |
59 | oan-mir-222a | Ornithorhynchus anatinus | oan-miR-222a | 21/21 | Ultra222 | + | 64-84 | N/A | - | miRBase_13_0 | 14/31 | 3/40 |
60 | oan-mir-222b | Ornithorhynchus anatinus | oan-miR-222b | 23/23 | Contig59337 | + | 69-91 | N/A | - | miRBase_13_0 | 14/31 | 3/40 |
61 | oan-mir-222b | Ornithorhynchus anatinus | oan-miR-222b* | 21/21 | Contig59337 | + | 26-46 | N/A | - | miRBase_13_0 | 14/31 | 3/40 |
62 | ornAna1-226 | Ornithorhynchus anatinus | oan-miR-222b* | 21/21 | Ultra519 | - | 7-27 | 9176990-9177066 | 0.964679 | Paralog | 14/31 | 3/40 |
63 | oryCun1-440 | Oryctolagus cuniculus | hsa-miR-222* | 22/22 | scaffold_209882 | + | 13-34 | N/A | 0.999574 | Ortholog | 14/31 | 1/40 |
64 | oryCun1-440 | Oryctolagus cuniculus | gga-miR-222 | 24/24 | scaffold_209882 | + | 49-72 | N/A | 0.995327 | Ortholog | 14/31 | 1/40 |
65 | oryCun1-440 | Oryctolagus cuniculus | hsa-miR-222 | 21/21 | scaffold_209882 | + | 51-71 | N/A | 0.999336 | Ortholog | 14/31 | 1/40 |
66 | oryLat2-201 | Oryzias latipes | oan-miR-222a* | 21/22 | chr2 | - | 34-54 | 28254518-28254621 | 0.984977 | Ortholog | 14/31 | 1/40 |
67 | oryLat2-201 | Oryzias latipes | hsa-miR-222* | 21/22 | chr2 | - | 35-56 | 28254518-28254621 | 0.982899 | Ortholog | 14/31 | 1/40 |
68 | oryLat2-201 | Oryzias latipes | gga-miR-222 | 24/24 | chr2 | - | 48-71 | 28254519-28254598 | 0.999576 | Ortholog | 14/31 | 1/40 |
69 | oryLat2-201 | Oryzias latipes | hsa-miR-222 | 21/21 | chr2 | - | 49-69 | 28254518-28254599 | 0.999707 | Ortholog | 14/31 | 1/40 |
70 | otoGar1-217 | Otolemur garnettii | hsa-miR-222 | 21/21 | scaffold_118079.1-30889 | - | 49-69 | N/A | 0.999013 | Ortholog | 14/31 | 1/40 |
71 | otoGar1-217 | Otolemur garnettii | oan-miR-222a* | 20/22 | scaffold_118079.1-30889 | - | 12-32 | N/A | 0.998001 | Ortholog | 14/31 | 1/40 |
72 | otoGar1-217 | Otolemur garnettii | hsa-miR-222* | 22/22 | scaffold_118079.1-30889 | - | 15-36 | N/A | 0.999475 | Ortholog | 14/31 | 1/40 |
73 | otoGar1-217 | Otolemur garnettii | gga-miR-222 | 24/24 | scaffold_118079.1-30889 | - | 48-71 | N/A | 0.996466 | Ortholog | 14/31 | 1/40 |
74 | ponAbe2-792 | Pongo abelii | oan-miR-222a* | 20/22 | chrX | - | 12-32 | 46471650-46471731 | 0.998375 | Ortholog | 14/31 | 1/40 |
75 | ponAbe2-792 | Pongo abelii | hsa-miR-222 | 21/21 | chrX | - | 49-69 | 46471652-46471729 | 0.999196 | Ortholog | 14/31 | 1/40 |
76 | ponAbe2-792 | Pongo abelii | gga-miR-222 | 24/24 | chrX | - | 48-71 | 46471652-46471728 | 0.997133 | Ortholog | 14/31 | 1/40 |
77 | ponAbe2-792 | Pongo abelii | hsa-miR-222* | 22/22 | chrX | - | 15-36 | 46471648-46471733 | 0.999573 | Ortholog | 14/31 | 1/40 |
78 | rno-mir-222 | Rattus norvegicus | rno-miR-222 | 21/21 | chrX | + | 62-82 | N/A | - | miRBase_13_0 | 14/31 | 1/40 |
79 | sorAra1-85 | Sorex araneus | gga-miR-222 | 24/24 | scaffold_231252 | - | 49-72 | N/A | 0.998595 | Ortholog | 14/31 | 1/40 |
80 | sorAra1-85 | Sorex araneus | hsa-miR-222* | 21/22 | scaffold_231252 | - | 15-36 | N/A | 0.999331 | Ortholog | 14/31 | 1/40 |
81 | sorAra1-85 | Sorex araneus | hsa-miR-222 | 21/21 | scaffold_231252 | - | 50-70 | N/A | 0.999664 | Ortholog | 14/31 | 1/40 |
82 | taeGut1-2 | Taeniopygia guttata | oan-miR-222a* | 21/22 | chr1 | + | 8-28 | 5260719-5260793 | 0.999392 | Ortholog | 14/31 | 2/40 |
83 | taeGut1-2 | Taeniopygia guttata | hsa-miR-222 | 21/21 | chr1 | + | 51-71 | 5260715-5260796 | 0.99915 | Ortholog | 14/31 | 2/40 |
84 | taeGut1-2 | Taeniopygia guttata | gga-miR-222 | 24/24 | chr1 | + | 47-70 | 5260719-5260793 | 0.993363 | Ortholog | 14/31 | 2/40 |
85 | taeGut1-2 | Taeniopygia guttata | hsa-miR-222* | 20/22 | chr1 | + | 16-37 | 5260713-5260797 | 0.999943 | Ortholog | 14/31 | 2/40 |
86 | taeGut1-329 | Taeniopygia guttata | hsa-miR-222 | 21/21 | chrUn | + | 51-71 | 1817279-1817360 | 0.99915 | Ortholog | 14/31 | 2/40 |
87 | taeGut1-329 | Taeniopygia guttata | hsa-miR-222* | 20/22 | chrUn | + | 16-37 | 1817277-1817361 | 0.999943 | Ortholog | 14/31 | 2/40 |
88 | taeGut1-329 | Taeniopygia guttata | gga-miR-222 | 24/24 | chrUn | + | 47-70 | 1817283-1817357 | 0.993363 | Ortholog | 14/31 | 2/40 |
89 | taeGut1-329 | Taeniopygia guttata | oan-miR-222a* | 21/22 | chrUn | + | 8-28 | 1817283-1817357 | 0.999392 | Ortholog | 14/31 | 2/40 |
90 | tni-mir-222 | Tetraodon nigroviridis | tni-miR-222 | 24/24 | chrUn_random | - | 43-66 | N/A | - | miRBase_13_0 | 14/31 | 1/40 |
91 | tupBel1-839 | Tupaia belangeri | oan-miR-222a* | 20/22 | scaffold_148117.1-245710 | - | 12-32 | N/A | 0.998809 | Ortholog | 14/31 | 1/40 |
92 | tupBel1-839 | Tupaia belangeri | hsa-miR-222* | 22/22 | scaffold_148117.1-245710 | - | 15-36 | N/A | 0.999744 | Ortholog | 14/31 | 1/40 |
93 | tupBel1-839 | Tupaia belangeri | hsa-miR-222 | 21/21 | scaffold_148117.1-245710 | - | 50-70 | N/A | 0.999452 | Ortholog | 14/31 | 1/40 |
94 | tupBel1-839 | Tupaia belangeri | gga-miR-222 | 24/24 | scaffold_148117.1-245710 | - | 48-71 | N/A | 0.997133 | Ortholog | 14/31 | 1/40 |
95 | xtr-mir-222 | Xenopus tropicalis | xtr-miR-222 | 24/24 | scaffold_169 | + | 39-62 | N/A | - | miRBase_13_0 | 14/31 | 1/40 |
Total | 95 record(s). |