- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-223 | Bos taurus | bta-miR-223 | 22/22 | chrX | - | 66-87 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
2 | calJac1-8 | Callithrix jacchus | rno-miR-223 | 21/21 | Contig10065 | - | 50-70 | 32689-32765 | 0.998845 | Ortholog | 18/31 | 1/34 |
3 | calJac1-8 | Callithrix jacchus | oan-miR-223 | 20/22 | Contig10065 | - | 50-69 | 32689-32765 | 0.999348 | Ortholog | 18/31 | 1/34 |
4 | calJac1-8 | Callithrix jacchus | oan-miR-223* | 22/23 | Contig10065 | - | 12-33 | 32687-32769 | 0.99857 | Ortholog | 18/31 | 1/34 |
5 | cfa-mir-223 | Canis familiaris | cfa-miR-223 | 21/21 | chrX | + | 68-88 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
6 | cavPor3-179 | Cavia porcellus | hsa-miR-223* | 22/22 | scaffold_122 | + | 8-29 | 2726059-2726135 | 0.996766 | Ortholog | 18/31 | 1/34 |
7 | cavPor3-179 | Cavia porcellus | oan-miR-223* | 23/23 | scaffold_122 | + | 9-31 | 2726058-2726136 | 0.998193 | Ortholog | 18/31 | 1/34 |
8 | dre-mir-223 | Danio rerio | dre-miR-223 | 21/21 | chr5 | - | 71-91 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
9 | echTel1-265 | Echinops telfari | rno-miR-223 | 21/21 | scaffold_304610 | + | 51-71 | N/A | 0.993513 | Ortholog | 18/31 | 1/34 |
10 | echTel1-265 | Echinops telfari | hsa-miR-223 | 22/22 | scaffold_304610 | + | 51-72 | N/A | 0.991255 | Ortholog | 18/31 | 1/34 |
11 | echTel1-265 | Echinops telfari | oan-miR-223 | 20/22 | scaffold_304610 | + | 52-71 | N/A | 0.997663 | Ortholog | 18/31 | 1/34 |
12 | equCab1-635 | Equus caballus | oan-miR-223* | 23/23 | chrUn | + | 9-31 | 149370939-149371017 | 0.997845 | Ortholog | 18/31 | 1/34 |
13 | equCab1-635 | Equus caballus | hsa-miR-223 | 22/22 | chrUn | + | 51-72 | 149370939-149371017 | 0.996886 | Ortholog | 18/31 | 1/34 |
14 | equCab1-635 | Equus caballus | rno-miR-223 | 21/21 | chrUn | + | 51-71 | 149370939-149371017 | 0.997777 | Ortholog | 18/31 | 1/34 |
15 | equCab1-635 | Equus caballus | oan-miR-223 | 20/22 | chrUn | + | 52-71 | 149370938-149371018 | 0.999216 | Ortholog | 18/31 | 1/34 |
16 | eriEur1-248 | Erinaceus europaeus | hsa-miR-223 | 22/22 | scaffold_364297 | + | 51-72 | N/A | 0.978021 | Ortholog | 18/31 | 1/34 |
17 | eriEur1-248 | Erinaceus europaeus | oan-miR-223 | 20/22 | scaffold_364297 | + | 52-71 | N/A | 0.991428 | Ortholog | 18/31 | 1/34 |
18 | eriEur1-248 | Erinaceus europaeus | rno-miR-223 | 21/21 | scaffold_364297 | + | 51-71 | N/A | 0.973873 | Ortholog | 18/31 | 1/34 |
19 | fr2-18 | Fugu rubripes | fru-miR-223 | 21/21 | chrUn | + | 51-71 | 24532446-24532524 | 0.999815 | Paralog | 18/31 | 2/34 |
20 | fr2-18 | Fugu rubripes | oan-miR-223 | 20/22 | chrUn | + | 52-71 | 24532445-24532526 | 0.999923 | Paralog | 18/31 | 2/34 |
21 | fr2-18 | Fugu rubripes | hsa-miR-223 | 22/22 | chrUn | + | 51-72 | 24532446-24532524 | 0.999815 | Paralog | 18/31 | 2/34 |
22 | fru-mir-223 | Fugu rubripes | fru-miR-223 | 21/21 | scaffold_6 | + | 48-68 | N/A | - | miRBase_13_0 | 18/31 | 2/34 |
23 | gga-mir-223 | Gallus gallus | gga-miR-223 | 21/21 | chr4 | + | 59-79 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
24 | gasAcu1-356 | Gasterosteus aculeatus | hsa-miR-223 | 22/22 | chrVII | - | 49-70 | 17148080-17148155 | 0.998433 | Ortholog | 18/31 | 1/34 |
25 | gasAcu1-356 | Gasterosteus aculeatus | rno-miR-223 | 21/21 | chrVII | - | 50-70 | 17148079-17148156 | 0.999246 | Ortholog | 18/31 | 1/34 |
26 | gasAcu1-356 | Gasterosteus aculeatus | oan-miR-223 | 20/22 | chrVII | - | 50-69 | 17148079-17148156 | 0.999588 | Ortholog | 18/31 | 1/34 |
27 | gasAcu1-356 | Gasterosteus aculeatus | hsa-miR-223* | 21/22 | chrVII | - | 10-30 | 17148079-17148157 | 0.999584 | Ortholog | 18/31 | 1/34 |
28 | gasAcu1-356 | Gasterosteus aculeatus | oan-miR-223* | 22/23 | chrVII | - | 12-33 | 17148077-17148159 | 0.999348 | Ortholog | 18/31 | 1/34 |
29 | ggo-mir-223 | Gorilla gorilla | ggo-miR-223 | 21/21 | N/A | N/A | 68-88 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
30 | hsa-mir-223 | Homo sapiens | hsa-miR-223* | 22/22 | chrX | + | 26-47 | 65155437-65155546 | - | miRBase_13_0 | 18/31 | 1/34 |
31 | hsa-mir-223 | Homo sapiens | hsa-miR-223 | 22/22 | chrX | + | 68-89 | 65155437-65155546 | - | miRBase_13_0 | 18/31 | 1/34 |
32 | loxAfr1-2 | Loxodonta africana | hsa-miR-223 | 22/22 | scaffold_10045 | + | 51-72 | N/A | 0.974648 | Ortholog | 18/31 | 1/34 |
33 | loxAfr1-2 | Loxodonta africana | rno-miR-223 | 21/21 | scaffold_10045 | + | 51-71 | N/A | 0.982547 | Ortholog | 18/31 | 1/34 |
34 | loxAfr1-2 | Loxodonta africana | oan-miR-223* | 22/23 | scaffold_10045 | + | 9-31 | N/A | 0.994485 | Ortholog | 18/31 | 1/34 |
35 | loxAfr1-2 | Loxodonta africana | oan-miR-223 | 20/22 | scaffold_10045 | + | 52-71 | N/A | 0.990876 | Ortholog | 18/31 | 1/34 |
36 | loxAfr1-2 | Loxodonta africana | hsa-miR-223* | 21/22 | scaffold_10045 | + | 51-72 | N/A | 0.895225 | Ortholog | 18/31 | 1/34 |
37 | mml-mir-223 | Macaca mulatta | mml-miR-223 | 21/21 | chrX | + | 68-88 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
38 | mdo-mir-223 | Monodelphis domestica | mdo-miR-223 | 21/21 | chrX | - | 72-92 | N/A | - | miRBase_13_0 | 18/31 | 2/34 |
39 | monDom4-488 | Monodelphis domestica | mdo-miR-223 | 21/21 | chrX | - | 50-70 | 10078249-10078325 | 0.998795 | Paralog | 18/31 | 2/34 |
40 | monDom4-488 | Monodelphis domestica | hsa-miR-223* | 22/22 | chrX | - | 10-31 | 10078247-10078327 | 0.997578 | Paralog | 18/31 | 2/34 |
41 | monDom4-488 | Monodelphis domestica | oan-miR-223 | 20/22 | chrX | - | 50-69 | 10078249-10078325 | 0.999275 | Paralog | 18/31 | 2/34 |
42 | monDom4-488 | Monodelphis domestica | oan-miR-223* | 23/23 | chrX | - | 10-32 | 10078247-10078327 | 0.996014 | Paralog | 18/31 | 2/34 |
43 | mmu-mir-223 | Mus musculus | mmu-miR-223 | 22/22 | chrX | + | 68-89 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
44 | oan-mir-223 | Ornithorhynchus anatinus | oan-miR-223* | 23/23 | Contig3675 | + | 34-56 | N/A | - | miRBase_13_0 | 18/31 | 2/34 |
45 | oan-mir-223 | Ornithorhynchus anatinus | oan-miR-223 | 22/22 | Contig3675 | + | 77-98 | N/A | - | miRBase_13_0 | 18/31 | 2/34 |
46 | ornAna1-113 | Ornithorhynchus anatinus | rno-miR-223 | 20/21 | Contig3675 | + | 52-71 | 13372-13452 | 0.999109 | Paralog | 18/31 | 2/34 |
47 | ornAna1-113 | Ornithorhynchus anatinus | oan-miR-223 | 22/22 | Contig3675 | + | 51-72 | 13373-13451 | 0.998267 | Paralog | 18/31 | 2/34 |
48 | ornAna1-113 | Ornithorhynchus anatinus | oan-miR-223* | 23/23 | Contig3675 | + | 9-31 | 13373-13451 | 0.996215 | Paralog | 18/31 | 2/34 |
49 | oryLat2-131 | Oryzias latipes | oan-miR-223 | 20/22 | chr14 | - | 50-69 | 17328715-17328792 | 0.999625 | Ortholog | 18/31 | 1/34 |
50 | oryLat2-131 | Oryzias latipes | hsa-miR-223* | 21/22 | chr14 | - | 10-30 | 17328715-17328793 | 0.999455 | Ortholog | 18/31 | 1/34 |
51 | oryLat2-131 | Oryzias latipes | hsa-miR-223 | 22/22 | chr14 | - | 49-70 | 17328716-17328791 | 0.999301 | Ortholog | 18/31 | 1/34 |
52 | oryLat2-131 | Oryzias latipes | rno-miR-223 | 21/21 | chr14 | - | 50-70 | 17328715-17328792 | 0.99933 | Ortholog | 18/31 | 1/34 |
53 | oryLat2-131 | Oryzias latipes | oan-miR-223* | 22/23 | chr14 | - | 12-33 | 17328713-17328795 | 0.999311 | Ortholog | 18/31 | 1/34 |
54 | otoGar1-283 | Otolemur garnettii | oan-miR-223 | 20/22 | scaffold_17181.1-46958 | + | 52-71 | N/A | 0.992555 | Ortholog | 18/31 | 1/34 |
55 | otoGar1-283 | Otolemur garnettii | hsa-miR-223 | 22/22 | scaffold_17181.1-46958 | + | 51-72 | N/A | 0.979501 | Ortholog | 18/31 | 1/34 |
56 | otoGar1-283 | Otolemur garnettii | rno-miR-223 | 21/21 | scaffold_17181.1-46958 | + | 51-71 | N/A | 0.977495 | Ortholog | 18/31 | 1/34 |
57 | ppa-mir-223 | Pan paniscus | ppa-miR-223 | 21/21 | N/A | N/A | 68-88 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
58 | ptr-mir-223 | Pan troglodytes | ptr-miR-223 | 21/21 | chrX | + | 68-88 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
59 | ponAbe2-785 | Pongo abelii | rno-miR-223 | 21/21 | chrX | + | 51-71 | 63380868-63380946 | 0.997777 | Ortholog | 18/31 | 1/34 |
60 | ponAbe2-785 | Pongo abelii | hsa-miR-223 | 22/22 | chrX | + | 51-72 | 63380868-63380946 | 0.996886 | Ortholog | 18/31 | 1/34 |
61 | ponAbe2-785 | Pongo abelii | oan-miR-223 | 20/22 | chrX | + | 52-71 | 63380867-63380947 | 0.999216 | Ortholog | 18/31 | 1/34 |
62 | ppy-mir-223 | Pongo pygmaeus | ppy-miR-223 | 21/21 | N/A | N/A | 68-88 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
63 | rno-mir-223 | Rattus norvegicus | rno-miR-223 | 21/21 | chrX | + | 68-88 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
64 | sla-mir-223 | Saguinus labiatus | sla-miR-223 | 21/21 | N/A | N/A | 68-88 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
65 | sorAra1-56 | Sorex araneus | oan-miR-223* | 21/23 | scaffold_196592 | + | 9-31 | N/A | 0.996173 | Ortholog | 18/31 | 1/34 |
66 | sorAra1-56 | Sorex araneus | oan-miR-223 | 20/22 | scaffold_196592 | + | 52-71 | N/A | 0.999094 | Ortholog | 18/31 | 1/34 |
67 | sorAra1-56 | Sorex araneus | hsa-miR-223 | 22/22 | scaffold_196592 | + | 51-72 | N/A | 0.996395 | Ortholog | 18/31 | 1/34 |
68 | sorAra1-56 | Sorex araneus | rno-miR-223 | 21/21 | scaffold_196592 | + | 51-71 | N/A | 0.997596 | Ortholog | 18/31 | 1/34 |
69 | taeGut1-282 | Taeniopygia guttata | rno-miR-223 | 21/21 | chr4A | - | 47-67 | 6644935-6645006 | 0.998896 | Ortholog | 18/31 | 1/34 |
70 | taeGut1-282 | Taeniopygia guttata | oan-miR-223* | 21/23 | chr4A | - | 6-26 | 6644935-6645006 | 0.998941 | Ortholog | 18/31 | 1/34 |
71 | taeGut1-282 | Taeniopygia guttata | hsa-miR-223 | 22/22 | chr4A | - | 47-68 | 6644935-6645006 | 0.999034 | Ortholog | 18/31 | 1/34 |
72 | taeGut1-282 | Taeniopygia guttata | oan-miR-223 | 20/22 | chr4A | - | 47-66 | 6644935-6645006 | 0.999275 | Ortholog | 18/31 | 1/34 |
73 | tni-mir-223 | Tetraodon nigroviridis | tni-miR-223 | 21/21 | chrUn_random | - | 57-77 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
74 | tupBel1-50 | Tupaia belangeri | rno-miR-223 | 21/21 | scaffold_108769.1-278566 | - | 50-70 | N/A | 0.996668 | Ortholog | 18/31 | 1/34 |
75 | tupBel1-50 | Tupaia belangeri | hsa-miR-223 | 22/22 | scaffold_108769.1-278566 | - | 49-70 | N/A | 0.996444 | Ortholog | 18/31 | 1/34 |
76 | tupBel1-50 | Tupaia belangeri | oan-miR-223 | 20/22 | scaffold_108769.1-278566 | - | 50-69 | N/A | 0.997911 | Ortholog | 18/31 | 1/34 |
77 | tupBel1-50 | Tupaia belangeri | hsa-miR-223* | 22/22 | scaffold_108769.1-278566 | - | 10-31 | N/A | 0.9896 | Ortholog | 18/31 | 1/34 |
78 | tupBel1-50 | Tupaia belangeri | oan-miR-223* | 23/23 | scaffold_108769.1-278566 | - | 10-32 | N/A | 0.983352 | Ortholog | 18/31 | 1/34 |
79 | xtr-mir-223 | Xenopus tropicalis | xtr-miR-223 | 21/21 | scaffold_239 | - | 55-75 | N/A | - | miRBase_13_0 | 18/31 | 1/34 |
Total | 79 record(s). |