- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-8 | Callithrix jacchus | rno-miR-223 | 21/21 | Contig10065 | - | 50-70 | 32689-32765 | 0.998845 | Ortholog | 18/31 | 1/34 |
2 | calJac1-8 | Callithrix jacchus | oan-miR-223 | 20/22 | Contig10065 | - | 50-69 | 32689-32765 | 0.999348 | Ortholog | 18/31 | 1/34 |
3 | calJac1-8 | Callithrix jacchus | oan-miR-223* | 22/23 | Contig10065 | - | 12-33 | 32687-32769 | 0.99857 | Ortholog | 18/31 | 1/34 |
4 | cavPor3-179 | Cavia porcellus | hsa-miR-223* | 22/22 | scaffold_122 | + | 8-29 | 2726059-2726135 | 0.996766 | Ortholog | 18/31 | 1/34 |
5 | cavPor3-179 | Cavia porcellus | oan-miR-223* | 23/23 | scaffold_122 | + | 9-31 | 2726058-2726136 | 0.998193 | Ortholog | 18/31 | 1/34 |
6 | echTel1-265 | Echinops telfari | oan-miR-223 | 20/22 | scaffold_304610 | + | 52-71 | N/A | 0.997663 | Ortholog | 18/31 | 1/34 |
7 | echTel1-265 | Echinops telfari | rno-miR-223 | 21/21 | scaffold_304610 | + | 51-71 | N/A | 0.993513 | Ortholog | 18/31 | 1/34 |
8 | echTel1-265 | Echinops telfari | hsa-miR-223 | 22/22 | scaffold_304610 | + | 51-72 | N/A | 0.991255 | Ortholog | 18/31 | 1/34 |
9 | equCab1-635 | Equus caballus | hsa-miR-223 | 22/22 | chrUn | + | 51-72 | 149370939-149371017 | 0.996886 | Ortholog | 18/31 | 1/34 |
10 | equCab1-635 | Equus caballus | rno-miR-223 | 21/21 | chrUn | + | 51-71 | 149370939-149371017 | 0.997777 | Ortholog | 18/31 | 1/34 |
11 | equCab1-635 | Equus caballus | oan-miR-223 | 20/22 | chrUn | + | 52-71 | 149370938-149371018 | 0.999216 | Ortholog | 18/31 | 1/34 |
12 | equCab1-635 | Equus caballus | oan-miR-223* | 23/23 | chrUn | + | 9-31 | 149370939-149371017 | 0.997845 | Ortholog | 18/31 | 1/34 |
13 | eriEur1-248 | Erinaceus europaeus | oan-miR-223 | 20/22 | scaffold_364297 | + | 52-71 | N/A | 0.991428 | Ortholog | 18/31 | 1/34 |
14 | eriEur1-248 | Erinaceus europaeus | rno-miR-223 | 21/21 | scaffold_364297 | + | 51-71 | N/A | 0.973873 | Ortholog | 18/31 | 1/34 |
15 | eriEur1-248 | Erinaceus europaeus | hsa-miR-223 | 22/22 | scaffold_364297 | + | 51-72 | N/A | 0.978021 | Ortholog | 18/31 | 1/34 |
16 | gasAcu1-356 | Gasterosteus aculeatus | oan-miR-223* | 22/23 | chrVII | - | 12-33 | 17148077-17148159 | 0.999348 | Ortholog | 18/31 | 1/34 |
17 | gasAcu1-356 | Gasterosteus aculeatus | hsa-miR-223 | 22/22 | chrVII | - | 49-70 | 17148080-17148155 | 0.998433 | Ortholog | 18/31 | 1/34 |
18 | gasAcu1-356 | Gasterosteus aculeatus | rno-miR-223 | 21/21 | chrVII | - | 50-70 | 17148079-17148156 | 0.999246 | Ortholog | 18/31 | 1/34 |
19 | gasAcu1-356 | Gasterosteus aculeatus | oan-miR-223 | 20/22 | chrVII | - | 50-69 | 17148079-17148156 | 0.999588 | Ortholog | 18/31 | 1/34 |
20 | gasAcu1-356 | Gasterosteus aculeatus | hsa-miR-223* | 21/22 | chrVII | - | 10-30 | 17148079-17148157 | 0.999584 | Ortholog | 18/31 | 1/34 |
21 | loxAfr1-2 | Loxodonta africana | hsa-miR-223 | 22/22 | scaffold_10045 | + | 51-72 | N/A | 0.974648 | Ortholog | 18/31 | 1/34 |
22 | loxAfr1-2 | Loxodonta africana | rno-miR-223 | 21/21 | scaffold_10045 | + | 51-71 | N/A | 0.982547 | Ortholog | 18/31 | 1/34 |
23 | loxAfr1-2 | Loxodonta africana | oan-miR-223 | 20/22 | scaffold_10045 | + | 52-71 | N/A | 0.990876 | Ortholog | 18/31 | 1/34 |
24 | loxAfr1-2 | Loxodonta africana | hsa-miR-223* | 21/22 | scaffold_10045 | + | 51-72 | N/A | 0.895225 | Ortholog | 18/31 | 1/34 |
25 | loxAfr1-2 | Loxodonta africana | oan-miR-223* | 22/23 | scaffold_10045 | + | 9-31 | N/A | 0.994485 | Ortholog | 18/31 | 1/34 |
26 | oryLat2-131 | Oryzias latipes | oan-miR-223* | 22/23 | chr14 | - | 12-33 | 17328713-17328795 | 0.999311 | Ortholog | 18/31 | 1/34 |
27 | oryLat2-131 | Oryzias latipes | oan-miR-223 | 20/22 | chr14 | - | 50-69 | 17328715-17328792 | 0.999625 | Ortholog | 18/31 | 1/34 |
28 | oryLat2-131 | Oryzias latipes | rno-miR-223 | 21/21 | chr14 | - | 50-70 | 17328715-17328792 | 0.99933 | Ortholog | 18/31 | 1/34 |
29 | oryLat2-131 | Oryzias latipes | hsa-miR-223 | 22/22 | chr14 | - | 49-70 | 17328716-17328791 | 0.999301 | Ortholog | 18/31 | 1/34 |
30 | oryLat2-131 | Oryzias latipes | hsa-miR-223* | 21/22 | chr14 | - | 10-30 | 17328715-17328793 | 0.999455 | Ortholog | 18/31 | 1/34 |
31 | otoGar1-283 | Otolemur garnettii | oan-miR-223 | 20/22 | scaffold_17181.1-46958 | + | 52-71 | N/A | 0.992555 | Ortholog | 18/31 | 1/34 |
32 | otoGar1-283 | Otolemur garnettii | rno-miR-223 | 21/21 | scaffold_17181.1-46958 | + | 51-71 | N/A | 0.977495 | Ortholog | 18/31 | 1/34 |
33 | otoGar1-283 | Otolemur garnettii | hsa-miR-223 | 22/22 | scaffold_17181.1-46958 | + | 51-72 | N/A | 0.979501 | Ortholog | 18/31 | 1/34 |
34 | ponAbe2-785 | Pongo abelii | hsa-miR-223 | 22/22 | chrX | + | 51-72 | 63380868-63380946 | 0.996886 | Ortholog | 18/31 | 1/34 |
35 | ponAbe2-785 | Pongo abelii | oan-miR-223 | 20/22 | chrX | + | 52-71 | 63380867-63380947 | 0.999216 | Ortholog | 18/31 | 1/34 |
36 | ponAbe2-785 | Pongo abelii | rno-miR-223 | 21/21 | chrX | + | 51-71 | 63380868-63380946 | 0.997777 | Ortholog | 18/31 | 1/34 |
37 | sorAra1-56 | Sorex araneus | oan-miR-223 | 20/22 | scaffold_196592 | + | 52-71 | N/A | 0.999094 | Ortholog | 18/31 | 1/34 |
38 | sorAra1-56 | Sorex araneus | hsa-miR-223 | 22/22 | scaffold_196592 | + | 51-72 | N/A | 0.996395 | Ortholog | 18/31 | 1/34 |
39 | sorAra1-56 | Sorex araneus | rno-miR-223 | 21/21 | scaffold_196592 | + | 51-71 | N/A | 0.997596 | Ortholog | 18/31 | 1/34 |
40 | sorAra1-56 | Sorex araneus | oan-miR-223* | 21/23 | scaffold_196592 | + | 9-31 | N/A | 0.996173 | Ortholog | 18/31 | 1/34 |
41 | taeGut1-282 | Taeniopygia guttata | oan-miR-223 | 20/22 | chr4A | - | 47-66 | 6644935-6645006 | 0.999275 | Ortholog | 18/31 | 1/34 |
42 | taeGut1-282 | Taeniopygia guttata | rno-miR-223 | 21/21 | chr4A | - | 47-67 | 6644935-6645006 | 0.998896 | Ortholog | 18/31 | 1/34 |
43 | taeGut1-282 | Taeniopygia guttata | oan-miR-223* | 21/23 | chr4A | - | 6-26 | 6644935-6645006 | 0.998941 | Ortholog | 18/31 | 1/34 |
44 | taeGut1-282 | Taeniopygia guttata | hsa-miR-223 | 22/22 | chr4A | - | 47-68 | 6644935-6645006 | 0.999034 | Ortholog | 18/31 | 1/34 |
45 | tupBel1-50 | Tupaia belangeri | rno-miR-223 | 21/21 | scaffold_108769.1-278566 | - | 50-70 | N/A | 0.996668 | Ortholog | 18/31 | 1/34 |
46 | tupBel1-50 | Tupaia belangeri | hsa-miR-223 | 22/22 | scaffold_108769.1-278566 | - | 49-70 | N/A | 0.996444 | Ortholog | 18/31 | 1/34 |
47 | tupBel1-50 | Tupaia belangeri | hsa-miR-223* | 22/22 | scaffold_108769.1-278566 | - | 10-31 | N/A | 0.9896 | Ortholog | 18/31 | 1/34 |
48 | tupBel1-50 | Tupaia belangeri | oan-miR-223 | 20/22 | scaffold_108769.1-278566 | - | 50-69 | N/A | 0.997911 | Ortholog | 18/31 | 1/34 |
49 | tupBel1-50 | Tupaia belangeri | oan-miR-223* | 23/23 | scaffold_108769.1-278566 | - | 10-32 | N/A | 0.983352 | Ortholog | 18/31 | 1/34 |
Total | 49 record(s). |