- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | caePb2-3 | Caenorhabditis brenneri | cel-miR-230 | 22/23 | chrUn | + | 50-72 | 4060017-4060094 | 0.996943 | Ortholog | 2/5 | 1/6 |
2 | cb3-65 | Caenorhabditis briggsae | cel-miR-230 | 21/23 | chrX | + | 51-71 | 10968466-10968545 | 0.979285 | Paralog | 2/5 | 2/6 |
3 | cb3-65 | Caenorhabditis briggsae | cbr-miR-230 | 23/23 | chrX | + | 50-72 | 10968467-10968543 | 0.962738 | Paralog | 2/5 | 2/6 |
4 | cbr-mir-230 | Caenorhabditis briggsae | cbr-miR-230 | 23/23 | cb25.fpc3857 | + | 59-81 | N/A | - | miRBase_13_0 | 2/5 | 2/6 |
5 | cel-mir-230 | Caenorhabditis elegans | cel-miR-230 | 23/23 | chrX | + | 61-83 | N/A | - | miRBase_13_0 | 2/5 | 1/6 |
6 | caeJap1-37 | Caenorhabditis japonica | cel-miR-230 | 23/23 | chrUn | - | 49-71 | 38524807-38524880 | 0.970823 | Ortholog | 2/5 | 1/6 |
7 | caeJap1-37 | Caenorhabditis japonica | cbr-miR-230 | 21/23 | chrUn | - | 50-70 | 38524806-38524881 | 0.988968 | Ortholog | 2/5 | 1/6 |
8 | caeRem3-32 | Caenorhabditis remanei | cel-miR-230 | 23/23 | chrUn | - | 49-71 | 2006540-2006614 | 0.99416 | Ortholog | 2/5 | 1/6 |
9 | caeRem3-32 | Caenorhabditis remanei | cbr-miR-230 | 21/23 | chrUn | - | 50-70 | 2006539-2006615 | 0.996695 | Ortholog | 2/5 | 1/6 |
Total | 9 record(s). |