- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-25 | Bos taurus | bta-miR-25 | 22/22 | chr25 | + | 52-73 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
2 | calJac1-571 | Callithrix jacchus | hsa-miR-25 | 22/22 | Contig60 | + | 51-72 | 62503-62584 | 0.995255 | Ortholog | 17/28 | 1/31 |
3 | cfa-mir-25 | Canis familiaris | cfa-miR-25 | 22/22 | chr6 | + | 38-59 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
4 | cavPor3-433 | Cavia porcellus | hsa-miR-25 | 22/22 | scaffold_30 | + | 51-72 | 4036344-4036425 | 0.995255 | Ortholog | 17/28 | 1/31 |
5 | dre-mir-25 | Danio rerio | dre-miR-25 | 22/22 | chr14 | + | 51-72 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
6 | dasNov1-351 | Dasypus novemcinctus | hsa-miR-25 | 22/22 | scaffold_80247 | + | 30-51 | N/A | 0.827212 | Ortholog | 17/28 | 1/31 |
7 | droGri2-70 | Drosophila grimshawi | ptr-miR-25 | 19/21 | scaffold_15081 | + | 52-71 | N/A | 0.914686 | Ortholog | 17/28 | 1/31 |
8 | droYak2-89 | Drosophila yakuba | ptr-miR-25 | 20/21 | chr3L | - | 32-51 | 22566248-22566348 | 0.993644 | Ortholog | 17/28 | 1/31 |
9 | eriEur1-25 | Erinaceus europaeus | hsa-miR-25 | 22/22 | scaffold_211419 | + | 51-72 | N/A | 0.998729 | Ortholog | 17/28 | 2/31 |
10 | eriEur1-44 | Erinaceus europaeus | hsa-miR-25 | 22/22 | scaffold_225750 | + | 51-72 | N/A | 0.998729 | Ortholog | 17/28 | 2/31 |
11 | felCat3-333 | Felis catus | hsa-miR-25 | 22/22 | scaffold_207975 | + | 51-72 | 67459-67541 | 0.998676 | Ortholog | 17/28 | 1/31 |
12 | fru-mir-25 | Fugu rubripes | fru-miR-25 | 22/22 | scaffold_5 | - | 51-72 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
13 | ggo-mir-25 | Gorilla gorilla | ggo-miR-25 | 22/22 | N/A | N/A | 52-73 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
14 | hsa-mir-25 | Homo sapiens | hsa-miR-25 | 22/22 | chr7 | - | 52-73 | 99529119-99529202 | - | miRBase_13_0 | 17/28 | 1/31 |
15 | hsa-mir-25 | Homo sapiens | hsa-miR-25* | 21/21 | chr7 | - | 14-34 | 99529119-99529202 | - | miRBase_13_0 | 17/28 | 1/31 |
16 | lla-mir-25 | Lagothrix lagotricha | lla-miR-25 | 22/22 | N/A | N/A | 52-73 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
17 | mml-mir-25 | Macaca mulatta | mml-miR-25 | 22/22 | chr3 | - | 52-73 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
18 | mne-mir-25 | Macaca nemestrina | mne-miR-25 | 22/22 | N/A | N/A | 52-73 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
19 | mdo-mir-25 | Monodelphis domestica | mdo-miR-25 | 22/22 | chr2 | + | 52-73 | N/A | - | miRBase_13_0 | 17/28 | 2/31 |
20 | monDom4-183 | Monodelphis domestica | hsa-miR-25* | 21/21 | chr2 | - | 22-42 | 278028216-278028307 | 0.877345 | Paralog | 17/28 | 2/31 |
21 | monDom4-183 | Monodelphis domestica | mdo-miR-25 | 22/22 | chr2 | - | 49-70 | 278028219-278028296 | 0.997231 | Paralog | 17/28 | 2/31 |
22 | mmu-mir-25 | Mus musculus | mmu-miR-25 | 22/22 | chr5 | - | 52-73 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
23 | oryCun1-229 | Oryctolagus cuniculus | hsa-miR-25 | 22/22 | scaffold_193147 | - | 49-70 | N/A | 0.997615 | Ortholog | 17/28 | 1/31 |
24 | otoGar1-377 | Otolemur garnettii | hsa-miR-25 | 22/22 | scaffold_84374.1-48130 | + | 51-72 | N/A | 0.995255 | Ortholog | 17/28 | 1/31 |
25 | ppa-mir-25 | Pan paniscus | ppa-miR-25 | 22/22 | N/A | N/A | 52-73 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
26 | ptr-mir-25 | Pan troglodytes | ptr-miR-25 | 21/21 | chr7 | - | 52-72 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
27 | ppy-mir-25 | Pongo pygmaeus | ppy-miR-25 | 22/22 | N/A | N/A | 52-73 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
28 | rno-mir-25 | Rattus norvegicus | rno-miR-25* | 22/22 | chr12 | - | 14-35 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
29 | rno-mir-25 | Rattus norvegicus | rno-miR-25 | 22/22 | chr12 | - | 52-73 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
30 | sorAra1-31 | Sorex araneus | hsa-miR-25 | 22/22 | scaffold_164885 | + | 51-72 | N/A | 0.995255 | Ortholog | 17/28 | 1/31 |
31 | tni-mir-25 | Tetraodon nigroviridis | tni-miR-25 | 22/22 | chr1 | - | 51-72 | N/A | - | miRBase_13_0 | 17/28 | 1/31 |
32 | tupBel1-565 | Tupaia belangeri | hsa-miR-25 | 22/22 | scaffold_142981.1-163579 | + | 51-72 | N/A | 0.995255 | Ortholog | 17/28 | 1/31 |
33 | xtr-mir-25-1 | Xenopus tropicalis | xtr-miR-25 | 22/22 | scaffold_5274 | + | 51-72 | N/A | - | miRBase_13_0 | 17/28 | 2/31 |
34 | xtr-mir-25-2 | Xenopus tropicalis | xtr-miR-25 | 22/22 | scaffold_925 | - | 51-72 | N/A | - | miRBase_13_0 | 17/28 | 2/31 |
Total | 34 record(s). |