- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | age-mir-28 | Ateles geoffroyi | age-miR-28 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
2 | bta-mir-28 | Bos taurus | bta-miR-28 | 22/22 | chr1 | - | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
3 | cfa-mir-28 | Canis familiaris | cfa-miR-28 | 22/22 | chr34 | + | 41-62 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
4 | eriEur1-138 | Erinaceus europaeus | ssc-miR-28 | 21/22 | scaffold_340781 | - | 8-29 | N/A | 0.999795 | Ortholog | 15/19 | 1/19 |
5 | eriEur1-138 | Erinaceus europaeus | mmu-miR-28* | 21/22 | scaffold_340781 | - | 48-69 | N/A | 0.99991 | Ortholog | 15/19 | 1/19 |
6 | ggo-mir-28 | Gorilla gorilla | ggo-miR-28 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
7 | hsa-mir-28 | Homo sapiens | hsa-miR-28-5p | 22/22 | chr3 | + | 14-35 | 189889263-189889348 | - | miRBase_13_0 | 15/19 | 1/19 |
8 | hsa-mir-28 | Homo sapiens | hsa-miR-28-3p | 22/22 | chr3 | + | 54-75 | 189889263-189889348 | - | miRBase_13_0 | 15/19 | 1/19 |
9 | lla-mir-28 | Lagothrix lagotricha | lla-miR-28 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
10 | loxAfr1-130 | Loxodonta africana | ssc-miR-28 | 20/22 | scaffold_2178 | + | 29-49 | N/A | 0.99888 | Ortholog | 15/19 | 1/19 |
11 | mml-mir-28 | Macaca mulatta | mml-miR-28 | 22/22 | chr2 | + | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
12 | mne-mir-28 | Macaca nemestrina | mne-miR-28 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
13 | mmu-mir-28 | Mus musculus | mmu-miR-28* | 22/22 | chr16 | + | 54-75 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
14 | mmu-mir-28 | Mus musculus | mmu-miR-28 | 22/22 | chr16 | + | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
15 | ppa-mir-28 | Pan paniscus | ppa-miR-28 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
16 | ptr-mir-28 | Pan troglodytes | ptr-miR-28 | 22/22 | chr3 | + | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
17 | ppy-mir-28 | Pongo pygmaeus | ppy-miR-28 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
18 | rno-mir-28 | Rattus norvegicus | rno-miR-28 | 22/22 | chr11 | - | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
19 | rno-mir-28 | Rattus norvegicus | rno-miR-28* | 22/22 | chr11 | - | 54-75 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
20 | sla-mir-28 | Saguinus labiatus | sla-miR-28 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
21 | sorAra1-140 | Sorex araneus | mmu-miR-28* | 21/22 | scaffold_244223 | - | 49-70 | N/A | 0.999923 | Ortholog | 15/19 | 1/19 |
22 | sorAra1-140 | Sorex araneus | ssc-miR-28 | 21/22 | scaffold_244223 | - | 13-34 | N/A | 0.999948 | Ortholog | 15/19 | 1/19 |
23 | ssc-mir-28 | Sus scrofa | ssc-miR-28 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 15/19 | 1/19 |
24 | tupBel1-458 | Tupaia belangeri | ssc-miR-28 | 21/22 | scaffold_138317.1-569919 | + | 10-31 | N/A | 0.999964 | Ortholog | 15/19 | 1/19 |
25 | tupBel1-458 | Tupaia belangeri | mmu-miR-28* | 21/22 | scaffold_138317.1-569919 | + | 50-71 | N/A | 0.999946 | Ortholog | 15/19 | 1/19 |
Total | 25 record(s). |