- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | apiMel2-100 | Apis mellifera | cap-miR-29a | 20/22 | GroupUn | - | 50-69 | 96779985-96780064 | 0.998113 | Paralog | 28/46 | 2/165 |
2 | braFlo1-73 | Branchiostoma floridae | cap-miR-29b | 21/21 | chrUn | + | 49-69 | 853767758-853767839 | 0.999879 | Paralog | 28/46 | 4/165 |
3 | braFlo1-73 | Branchiostoma floridae | cap-miR-29a | 20/22 | chrUn | + | 49-68 | 853767758-853767839 | 0.999905 | Paralog | 28/46 | 4/165 |
4 | braFlo1-73 | Branchiostoma floridae | bfl-miR-29b | 23/23 | chrUn | + | 50-72 | 853767758-853767839 | 0.999865 | Paralog | 28/46 | 4/165 |
5 | braFlo1-74 | Branchiostoma floridae | sko-miR-29a | 21/22 | chrUn | + | 51-71 | 853768651-853768734 | 0.999994 | Paralog | 28/46 | 4/165 |
6 | braFlo1-74 | Branchiostoma floridae | bfl-miR-29a | 23/23 | chrUn | + | 50-72 | 853768652-853768733 | 0.999992 | Paralog | 28/46 | 4/165 |
7 | braFlo1-74 | Branchiostoma floridae | ggo-miR-29a | 20/22 | chrUn | + | 51-72 | 853768650-853768733 | 0.999992 | Paralog | 28/46 | 4/165 |
8 | fr2-146 | Fugu rubripes | oan-miR-29a-2* | 19/21 | chrUn | + | 8-28 | 297176375-297176449 | 0.995972 | Paralog | 28/46 | 5/165 |
9 | fr2-146 | Fugu rubripes | hsa-miR-29a* | 22/22 | chrUn | + | 15-36 | 297176370-297176453 | 0.9986 | Paralog | 28/46 | 5/165 |
10 | rheMac2-180 | Macaca mulatta | mml-miR-29a | 20/22 | chr19 | - | 10-31 | 41013570-41013649 | 0.81812 | Paralog | 28/46 | 5/165 |
11 | monDom4-161 | Monodelphis domestica | oan-miR-29a-2* | 21/21 | chr2 | - | 14-34 | 114183780-114183863 | 0.968277 | Paralog | 28/46 | 6/165 |
12 | monDom4-162 | Monodelphis domestica | hsa-miR-29b-2* | 22/22 | chr2 | - | 11-32 | 114184513-114184593 | 0.856293 | Paralog | 28/46 | 6/165 |
13 | monDom4-162 | Monodelphis domestica | cap-miR-29a | 20/22 | chr2 | - | 50-69 | 114184515-114184591 | 0.991546 | Paralog | 28/46 | 6/165 |
14 | monDom4-162 | Monodelphis domestica | hsa-miR-29b | 23/23 | chr2 | - | 49-71 | 114184516-114184590 | 0.978966 | Paralog | 28/46 | 6/165 |
15 | monDom4-162 | Monodelphis domestica | cap-miR-29b | 21/21 | chr2 | - | 50-70 | 114184515-114184591 | 0.988584 | Paralog | 28/46 | 6/165 |
16 | monDom4-162 | Monodelphis domestica | dre-miR-29b | 22/22 | chr2 | - | 49-70 | 114184516-114184590 | 0.982297 | Paralog | 28/46 | 6/165 |
17 | monDom4-450 | Monodelphis domestica | hsa-miR-29a* | 22/22 | chr8 | - | 13-34 | 186525207-186525290 | 0.972044 | Paralog | 28/46 | 6/165 |
18 | monDom4-450 | Monodelphis domestica | cap-miR-29a | 20/22 | chr8 | - | 50-70 | 186525208-186525289 | 0.986961 | Paralog | 28/46 | 6/165 |
19 | monDom4-450 | Monodelphis domestica | bta-miR-29a | 22/23 | chr8 | - | 49-71 | 186525208-186525289 | 0.983715 | Paralog | 28/46 | 6/165 |
20 | monDom4-450 | Monodelphis domestica | ggo-miR-29a | 21/22 | chr8 | - | 49-70 | 186525208-186525289 | 0.980791 | Paralog | 28/46 | 6/165 |
21 | monDom4-450 | Monodelphis domestica | mdo-miR-29a | 20/20 | chr8 | - | 50-69 | 186525208-186525289 | 0.981966 | Paralog | 28/46 | 6/165 |
22 | monDom4-452 | Monodelphis domestica | oan-miR-29b* | 22/22 | chr8 | - | 13-34 | 186525629-186525712 | 0.997592 | Paralog | 28/46 | 6/165 |
23 | monDom4-452 | Monodelphis domestica | rno-miR-29b-1* | 22/22 | chr8 | - | 21-42 | 186525625-186525716 | 0.999345 | Paralog | 28/46 | 6/165 |
24 | monDom4-452 | Monodelphis domestica | mmu-miR-29b* | 22/22 | chr8 | - | 11-32 | 186525630-186525711 | 0.996946 | Paralog | 28/46 | 6/165 |
25 | monDom4-452 | Monodelphis domestica | hsa-miR-29b-1* | 24/24 | chr8 | - | 12-35 | 186525629-186525712 | 0.997437 | Paralog | 28/46 | 6/165 |
26 | monDom4-452 | Monodelphis domestica | cap-miR-29b | 21/21 | chr8 | - | 50-70 | 186525632-186525709 | 0.998824 | Paralog | 28/46 | 6/165 |
27 | monDom4-452 | Monodelphis domestica | cap-miR-29a | 20/22 | chr8 | - | 50-69 | 186525632-186525709 | 0.999105 | Paralog | 28/46 | 6/165 |
28 | monDom4-452 | Monodelphis domestica | dre-miR-29b | 22/22 | chr8 | - | 49-70 | 186525633-186525708 | 0.998504 | Paralog | 28/46 | 6/165 |
29 | monDom4-452 | Monodelphis domestica | hsa-miR-29b | 23/23 | chr8 | - | 49-71 | 186525633-186525708 | 0.998316 | Paralog | 28/46 | 6/165 |
30 | ornAna1-36 | Ornithorhynchus anatinus | oan-miR-29b | 22/22 | chr7 | - | 49-70 | 38484595-38484669 | 0.982297 | Paralog | 28/46 | 4/165 |
31 | ornAna1-36 | Ornithorhynchus anatinus | cap-miR-29a | 20/22 | chr7 | - | 50-69 | 38484594-38484670 | 0.991546 | Paralog | 28/46 | 4/165 |
32 | ornAna1-36 | Ornithorhynchus anatinus | cap-miR-29b | 21/21 | chr7 | - | 50-70 | 38484594-38484670 | 0.988584 | Paralog | 28/46 | 4/165 |
33 | ornAna1-36 | Ornithorhynchus anatinus | hsa-miR-29b-2* | 22/22 | chr7 | - | 11-32 | 38484592-38484672 | 0.856293 | Paralog | 28/46 | 4/165 |
34 | ornAna1-36 | Ornithorhynchus anatinus | hsa-miR-29b | 23/23 | chr7 | - | 48-70 | 38484595-38484669 | 0.960823 | Paralog | 28/46 | 4/165 |
35 | tetNig1-21 | Tetraodon nigroviridis | gga-miR-29c | 20/20 | chr11 | + | 52-71 | 7882554-7882637 | 0.990044 | Paralog | 28/46 | 6/165 |
36 | tetNig1-21 | Tetraodon nigroviridis | ggo-miR-29a | 20/22 | chr11 | + | 51-71 | 7882554-7882637 | 0.982925 | Paralog | 28/46 | 6/165 |
37 | tetNig1-44 | Tetraodon nigroviridis | sko-miR-29a | 20/22 | chr13 | + | 52-71 | 9813875-9813956 | 0.998926 | Paralog | 28/46 | 6/165 |
Total | 37 record(s). |