- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bosTau4-84 | Bos taurus | bta-miR-299 | 21/22 | chr21 | - | 23-43 | 66002421-66002513 | 0.999616 | Paralog | 6/18 | 2/37 |
2 | bta-mir-299 | Bos taurus | bta-miR-299 | 22/22 | chr21 | + | 7-28 | N/A | - | miRBase_13_0 | 6/18 | 2/37 |
3 | calJac1-244 | Callithrix jacchus | hsa-miR-299-5p | 21/22 | Contig2207 | + | 22-42 | 249341-249431 | 0.999621 | Ortholog | 6/18 | 2/37 |
4 | calJac1-286 | Callithrix jacchus | hsa-miR-299-5p | 22/22 | Contig2207 | - | 23-44 | 249340-249432 | 0.999841 | Ortholog | 6/18 | 2/37 |
5 | calJac1-286 | Callithrix jacchus | hsa-miR-299-3p | 21/22 | Contig2207 | - | 49-70 | 249344-249426 | 0.999743 | Ortholog | 6/18 | 2/37 |
6 | canFam2-287 | Canis familiaris | cfa-miR-299 | 21/22 | chr8 | - | 22-42 | 72298265-72298356 | 0.999244 | Paralog | 6/18 | 2/37 |
7 | cfa-mir-299 | Canis familiaris | cfa-miR-299 | 22/22 | chr8 | + | 7-28 | N/A | - | miRBase_13_0 | 6/18 | 2/37 |
8 | cavPor3-136 | Cavia porcellus | hsa-miR-299-5p | 21/22 | scaffold_111 | - | 23-43 | 1083706-1083798 | 0.999616 | Ortholog | 6/18 | 2/37 |
9 | cavPor3-95 | Cavia porcellus | hsa-miR-299-3p | 21/22 | scaffold_111 | + | 51-72 | 1083710-1083796 | 0.999739 | Ortholog | 6/18 | 2/37 |
10 | cavPor3-95 | Cavia porcellus | hsa-miR-299-5p | 22/22 | scaffold_111 | + | 20-41 | 1083709-1083797 | 0.999841 | Ortholog | 6/18 | 2/37 |
11 | dasNov1-265 | Dasypus novemcinctus | hsa-miR-299-5p | 20/22 | scaffold_5303 | + | 22-42 | N/A | 0.999522 | Ortholog | 6/18 | 2/37 |
12 | dasNov1-287 | Dasypus novemcinctus | hsa-miR-299-3p | 22/22 | scaffold_5303 | - | 49-70 | N/A | 0.999897 | Ortholog | 6/18 | 2/37 |
13 | dasNov1-287 | Dasypus novemcinctus | hsa-miR-299-5p | 22/22 | scaffold_5303 | - | 25-46 | N/A | 0.999888 | Ortholog | 6/18 | 2/37 |
14 | echTel1-208 | Echinops telfari | hsa-miR-299-3p | 22/22 | scaffold_293632 | + | 51-72 | N/A | 0.999916 | Ortholog | 6/18 | 1/37 |
15 | equCab1-327 | Equus caballus | hsa-miR-299-5p | 22/22 | chr24 | + | 21-42 | 42395431-42395520 | 0.999864 | Ortholog | 6/18 | 2/37 |
16 | equCab1-327 | Equus caballus | hsa-miR-299-3p | 22/22 | chr24 | + | 51-72 | 42395433-42395519 | 0.999881 | Ortholog | 6/18 | 2/37 |
17 | equCab1-373 | Equus caballus | hsa-miR-299-5p | 20/22 | chr24 | - | 23-43 | 42395429-42395521 | 0.999807 | Ortholog | 6/18 | 2/37 |
18 | felCat3-117 | Felis catus | hsa-miR-299-5p | 21/22 | scaffold_147198 | - | 23-43 | 10892-10984 | 0.999248 | Ortholog | 6/18 | 2/37 |
19 | felCat3-88 | Felis catus | hsa-miR-299-3p | 21/22 | scaffold_147198 | + | 51-72 | 10896-10982 | 0.999743 | Ortholog | 6/18 | 2/37 |
20 | felCat3-88 | Felis catus | hsa-miR-299-5p | 22/22 | scaffold_147198 | + | 19-40 | 10896-10982 | 0.99984 | Ortholog | 6/18 | 2/37 |
21 | hg18-62 | Homo sapiens | hsa-miR-299-5p | 20/22 | chr14 | - | 23-43 | 100559868-100559960 | 0.999807 | Paralog | 6/18 | 2/37 |
22 | hsa-mir-299 | Homo sapiens | hsa-miR-299-3p | 22/22 | chr14 | + | 39-60 | 100559884-100559946 | - | miRBase_13_0 | 6/18 | 2/37 |
23 | hsa-mir-299 | Homo sapiens | hsa-miR-299-5p | 22/22 | chr14 | + | 7-28 | 100559884-100559946 | - | miRBase_13_0 | 6/18 | 2/37 |
24 | loxAfr1-266 | Loxodonta africana | hsa-miR-299-3p | 22/22 | scaffold_4770 | + | 51-72 | N/A | 0.999881 | Ortholog | 6/18 | 2/37 |
25 | loxAfr1-266 | Loxodonta africana | hsa-miR-299-5p | 22/22 | scaffold_4770 | + | 20-41 | N/A | 0.999868 | Ortholog | 6/18 | 2/37 |
26 | loxAfr1-273 | Loxodonta africana | hsa-miR-299-5p | 20/22 | scaffold_4770 | - | 21-41 | N/A | 0.9998 | Ortholog | 6/18 | 2/37 |
27 | mml-mir-299 | Macaca mulatta | mml-miR-299-5p | 22/22 | chr7 | + | 7-28 | N/A | - | miRBase_13_0 | 6/18 | 2/37 |
28 | mml-mir-299 | Macaca mulatta | mml-miR-299-3p | 22/22 | chr7 | + | 39-60 | N/A | - | miRBase_13_0 | 6/18 | 2/37 |
29 | rheMac2-311 | Macaca mulatta | mml-miR-299-5p | 21/22 | chr7 | - | 23-43 | 164309571-164309663 | 0.999616 | Paralog | 6/18 | 2/37 |
30 | mm9-135 | Mus musculus | mmu-miR-299* | 21/22 | chr12 | - | 23-43 | 110948832-110948924 | 0.999616 | Paralog | 6/18 | 2/37 |
31 | mmu-mir-299 | Mus musculus | mmu-miR-299* | 22/22 | chr12 | + | 7-28 | N/A | - | miRBase_13_0 | 6/18 | 2/37 |
32 | mmu-mir-299 | Mus musculus | mmu-miR-299 | 22/22 | chr12 | + | 39-60 | N/A | - | miRBase_13_0 | 6/18 | 2/37 |
33 | oryCun1-126 | Oryctolagus cuniculus | hsa-miR-299-5p | 22/22 | scaffold_168327 | + | 20-41 | N/A | 0.99985 | Ortholog | 6/18 | 2/37 |
34 | oryCun1-126 | Oryctolagus cuniculus | hsa-miR-299-3p | 21/22 | scaffold_168327 | + | 51-72 | N/A | 0.999746 | Ortholog | 6/18 | 2/37 |
35 | oryCun1-134 | Oryctolagus cuniculus | hsa-miR-299-5p | 21/22 | scaffold_168327 | - | 26-46 | N/A | 0.999242 | Ortholog | 6/18 | 2/37 |
36 | otoGar1-147 | Otolemur garnettii | hsa-miR-299-5p | 22/22 | scaffold_116158.1-127804 | + | 18-39 | N/A | 0.999839 | Ortholog | 6/18 | 4/37 |
37 | otoGar1-147 | Otolemur garnettii | hsa-miR-299-3p | 21/22 | scaffold_116158.1-127804 | + | 50-71 | N/A | 0.999739 | Ortholog | 6/18 | 4/37 |
38 | otoGar1-179 | Otolemur garnettii | hsa-miR-299-5p | 21/22 | scaffold_116158.1-127804 | - | 23-43 | N/A | 0.999616 | Ortholog | 6/18 | 4/37 |
39 | otoGar1-274 | Otolemur garnettii | hsa-miR-299-5p | 22/22 | scaffold_16304.1-39837 | + | 20-41 | N/A | 0.999898 | Ortholog | 6/18 | 4/37 |
40 | otoGar1-274 | Otolemur garnettii | hsa-miR-299-3p | 21/22 | scaffold_16304.1-39837 | + | 50-71 | N/A | 0.99983 | Ortholog | 6/18 | 4/37 |
41 | otoGar1-276 | Otolemur garnettii | hsa-miR-299-5p | 21/22 | scaffold_16304.1-39837 | - | 24-44 | N/A | 0.999674 | Ortholog | 6/18 | 4/37 |
42 | panTro2-61 | Pan troglodytes | hsa-miR-299-5p | 22/22 | chr14 | + | 21-42 | 101454288-101454377 | 0.999839 | Ortholog | 6/18 | 2/37 |
43 | panTro2-61 | Pan troglodytes | hsa-miR-299-3p | 21/22 | chr14 | + | 51-72 | 101454290-101454376 | 0.999739 | Ortholog | 6/18 | 2/37 |
44 | panTro2-73 | Pan troglodytes | hsa-miR-299-5p | 21/22 | chr14 | - | 23-43 | 101454286-101454378 | 0.999616 | Ortholog | 6/18 | 2/37 |
45 | ponAbe2-199 | Pongo abelii | hsa-miR-299-3p | 21/22 | chr14 | + | 51-72 | 102585191-102585277 | 0.999739 | Ortholog | 6/18 | 2/37 |
46 | ponAbe2-199 | Pongo abelii | hsa-miR-299-5p | 22/22 | chr14 | + | 21-42 | 102585189-102585278 | 0.999839 | Ortholog | 6/18 | 2/37 |
47 | ponAbe2-254 | Pongo abelii | hsa-miR-299-5p | 21/22 | chr14 | - | 23-43 | 102585187-102585279 | 0.999616 | Ortholog | 6/18 | 2/37 |
48 | rn4-291 | Rattus norvegicus | rno-miR-299 | 21/22 | chr6 | - | 23-43 | 134389806-134389898 | 0.999616 | Paralog | 6/18 | 2/37 |
49 | rno-mir-299 | Rattus norvegicus | rno-miR-299 | 22/22 | chr6 | + | 7-28 | N/A | - | miRBase_13_0 | 6/18 | 2/37 |
50 | tupBel1-636 | Tupaia belangeri | hsa-miR-299-3p | 21/22 | scaffold_146327.1-70409 | + | 51-72 | N/A | 0.999739 | Ortholog | 6/18 | 2/37 |
51 | tupBel1-636 | Tupaia belangeri | hsa-miR-299-5p | 22/22 | scaffold_146327.1-70409 | + | 21-42 | N/A | 0.999839 | Ortholog | 6/18 | 2/37 |
52 | tupBel1-663 | Tupaia belangeri | hsa-miR-299-5p | 21/22 | scaffold_146327.1-70409 | - | 23-43 | N/A | 0.999616 | Ortholog | 6/18 | 2/37 |
Total | 52 record(s). |