- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | age-mir-30b | Ateles geoffroyi | age-miR-30b | 21/21 | N/A | N/A | 17-37 | N/A | - | miRBase_13_0 | 21/38 | 1/186 |
2 | bta-mir-30a | Bos taurus | bta-miR-30a-5p | 24/24 | chr9 | - | 2-25 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
3 | bta-mir-30b | Bos taurus | bta-miR-30b | 22/22 | chr14 | + | 17-38 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
4 | bta-mir-30c | Bos taurus | bta-miR-30c | 23/23 | chr3 | - | 26-48 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
5 | bta-mir-30d | Bos taurus | bta-miR-30d | 24/24 | chr14 | + | 6-29 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
6 | bta-mir-30e | Bos taurus | bta-miR-30e-5p | 24/24 | chr3 | - | 17-40 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
7 | bta-mir-30f | Bos taurus | bta-miR-30f | 24/24 | chr9 | - | 14-37 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
8 | cfa-mir-30a | Canis familiaris | cfa-miR-30a | 23/23 | chr12 | - | 1-23 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
9 | cfa-mir-30b | Canis familiaris | cfa-miR-30b | 22/22 | chr13 | - | 1-22 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
10 | cfa-mir-30c-1 | Canis familiaris | cfa-miR-30c | 24/24 | chr15 | - | 1-24 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
11 | cfa-mir-30c-2 | Canis familiaris | cfa-miR-30c | 24/24 | chr12 | - | 1-24 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
12 | cfa-mir-30d | Canis familiaris | cfa-miR-30d | 24/24 | chr13 | - | 1-24 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
13 | cfa-mir-30e | Canis familiaris | cfa-miR-30e | 22/22 | chr15 | - | 43-64 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
14 | dre-mir-30a | Danio rerio | dre-miR-30a | 22/22 | Zv7_NA4696 | - | 14-35 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
15 | dre-mir-30b | Danio rerio | dre-miR-30b | 22/22 | chr16 | + | 16-37 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
16 | dre-mir-30c | Danio rerio | dre-miR-30c | 22/22 | chr13 | - | 11-32 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
17 | dre-mir-30d | Danio rerio | dre-miR-30d | 22/22 | chr16 | + | 35-56 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
18 | dre-mir-30e-2 | Danio rerio | dre-miR-30e | 22/22 | chr13 | - | 11-32 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
19 | dre-mir-30e-2 | Danio rerio | dre-miR-30e* | 22/22 | chr13 | - | 51-72 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
20 | fru-mir-30b | Fugu rubripes | fru-miR-30b | 22/22 | scaffold_61 | - | 16-37 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
21 | fru-mir-30c | Fugu rubripes | fru-miR-30c | 22/22 | scaffold_113 | + | 9-30 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
22 | fru-mir-30d | Fugu rubripes | fru-miR-30d | 22/22 | scaffold_61 | - | 21-42 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
23 | gga-mir-30a | Gallus gallus | gga-miR-30a-3p | 22/22 | chr3 | + | 48-69 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
24 | gga-mir-30a | Gallus gallus | gga-miR-30a-5p | 22/22 | chr3 | + | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
25 | gga-mir-30b | Gallus gallus | gga-miR-30b | 22/22 | chr2 | - | 16-37 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
26 | gga-mir-30c-1 | Gallus gallus | gga-miR-30c | 24/24 | chr23 | + | 17-40 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
27 | gga-mir-30c-2 | Gallus gallus | gga-miR-30c | 24/24 | chr3 | + | 7-30 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
28 | gga-mir-30d | Gallus gallus | gga-miR-30d | 22/22 | chr2 | - | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
29 | gga-mir-30e | Gallus gallus | gga-miR-30e | 19/19 | chr23 | + | 19-37 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
30 | ggo-mir-30a | Gorilla gorilla | ggo-miR-30a-3p | 22/22 | N/A | N/A | 47-68 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
31 | ggo-mir-30a | Gorilla gorilla | ggo-miR-30a-5p | 22/22 | N/A | N/A | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
32 | ggo-mir-30b | Gorilla gorilla | ggo-miR-30b | 21/21 | N/A | N/A | 17-37 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
33 | ggo-mir-30d | Gorilla gorilla | ggo-miR-30d | 22/22 | N/A | N/A | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
34 | hsa-mir-30a | Homo sapiens | hsa-miR-30a* | 22/22 | chr6 | - | 47-68 | 72169975-72170045 | - | miRBase_13_0 | 21/38 | 6/186 |
35 | hsa-mir-30a | Homo sapiens | hsa-miR-30a | 22/22 | chr6 | - | 6-27 | 72169975-72170045 | - | miRBase_13_0 | 21/38 | 6/186 |
36 | hsa-mir-30b | Homo sapiens | hsa-miR-30b | 22/22 | chr8 | - | 17-38 | 135881945-135882032 | - | miRBase_13_0 | 21/38 | 6/186 |
37 | hsa-mir-30b | Homo sapiens | hsa-miR-30b* | 22/22 | chr8 | - | 55-76 | 135881945-135882032 | - | miRBase_13_0 | 21/38 | 6/186 |
38 | hsa-mir-30c-1 | Homo sapiens | hsa-miR-30c | 23/23 | chr1 | + | 17-39 | 40995543-40995631 | - | miRBase_13_0 | 21/38 | 6/186 |
39 | hsa-mir-30c-1 | Homo sapiens | hsa-miR-30c-1* | 22/22 | chr1 | + | 56-77 | 40995543-40995631 | - | miRBase_13_0 | 21/38 | 6/186 |
40 | hsa-mir-30c-2 | Homo sapiens | hsa-miR-30c | 23/23 | chr6 | - | 7-29 | 72143384-72143455 | - | miRBase_13_0 | 21/38 | 6/186 |
41 | hsa-mir-30c-2 | Homo sapiens | hsa-miR-30c-2* | 22/22 | chr6 | - | 47-68 | 72143384-72143455 | - | miRBase_13_0 | 21/38 | 6/186 |
42 | hsa-mir-30d | Homo sapiens | hsa-miR-30d | 22/22 | chr8 | - | 6-27 | 135886301-135886370 | - | miRBase_13_0 | 21/38 | 6/186 |
43 | hsa-mir-30d | Homo sapiens | hsa-miR-30d* | 22/22 | chr8 | - | 46-67 | 135886301-135886370 | - | miRBase_13_0 | 21/38 | 6/186 |
44 | hsa-mir-30e | Homo sapiens | hsa-miR-30e* | 22/22 | chr1 | + | 59-80 | 40992614-40992705 | - | miRBase_13_0 | 21/38 | 6/186 |
45 | hsa-mir-30e | Homo sapiens | hsa-miR-30e | 22/22 | chr1 | + | 17-38 | 40992614-40992705 | - | miRBase_13_0 | 21/38 | 6/186 |
46 | lla-mir-30b | Lagothrix lagotricha | lla-miR-30b | 21/21 | N/A | N/A | 17-37 | N/A | - | miRBase_13_0 | 21/38 | 2/186 |
47 | lla-mir-30c | Lagothrix lagotricha | lla-miR-30c | 23/23 | N/A | N/A | 7-29 | N/A | - | miRBase_13_0 | 21/38 | 2/186 |
48 | mml-mir-30a | Macaca mulatta | mml-miR-30a-5p | 22/22 | chr4 | - | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
49 | mml-mir-30a | Macaca mulatta | mml-miR-30a-3p | 22/22 | chr4 | - | 47-68 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
50 | mml-mir-30b | Macaca mulatta | mml-miR-30b | 21/21 | chr8 | - | 17-37 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
51 | mml-mir-30c-1 | Macaca mulatta | mml-miR-30c | 23/23 | chr1 | + | 17-39 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
52 | mml-mir-30c-2 | Macaca mulatta | mml-miR-30c | 23/23 | chr4 | - | 7-29 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
53 | mml-mir-30d | Macaca mulatta | mml-miR-30d | 22/22 | chr8 | - | 5-26 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
54 | mml-mir-30e | Macaca mulatta | mml-miR-30e | 22/22 | chr1 | + | 17-38 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
55 | mne-mir-30b | Macaca nemestrina | mne-miR-30b | 21/21 | N/A | N/A | 17-37 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
56 | mne-mir-30c | Macaca nemestrina | mne-miR-30c | 23/23 | N/A | N/A | 7-29 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
57 | mne-mir-30d | Macaca nemestrina | mne-miR-30d | 22/22 | N/A | N/A | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
58 | mdo-mir-30a | Monodelphis domestica | mdo-miR-30a | 22/22 | chr2 | - | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
59 | mmu-mir-30a | Mus musculus | mmu-miR-30a* | 22/22 | chr1 | + | 47-68 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
60 | mmu-mir-30a | Mus musculus | mmu-miR-30a | 22/22 | chr1 | + | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
61 | mmu-mir-30b | Mus musculus | mmu-miR-30b* | 22/22 | chr15 | - | 59-80 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
62 | mmu-mir-30b | Mus musculus | mmu-miR-30b | 22/22 | chr15 | - | 21-42 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
63 | mmu-mir-30c-1 | Mus musculus | mmu-miR-30c | 23/23 | chr4 | - | 17-39 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
64 | mmu-mir-30c-1 | Mus musculus | mmu-miR-30c-1* | 22/22 | chr4 | - | 56-77 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
65 | mmu-mir-30c-2 | Mus musculus | mmu-miR-30c-2* | 22/22 | chr1 | + | 54-75 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
66 | mmu-mir-30c-2 | Mus musculus | mmu-miR-30c | 23/23 | chr1 | + | 14-36 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
67 | mmu-mir-30d | Mus musculus | mmu-miR-30d | 22/22 | chr15 | - | 12-33 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
68 | mmu-mir-30e | Mus musculus | mmu-miR-30e | 22/22 | chr4 | - | 17-38 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
69 | mmu-mir-30e | Mus musculus | mmu-miR-30e* | 22/22 | chr4 | - | 59-80 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
70 | oan-mir-30a | Ornithorhynchus anatinus | oan-miR-30a | 23/23 | Contig1501 | - | 31-53 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
71 | oan-mir-30a | Ornithorhynchus anatinus | oan-miR-30a* | 22/22 | Contig1501 | - | 73-94 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
72 | oan-mir-30b | Ornithorhynchus anatinus | oan-miR-30b | 22/22 | Contig510 | + | 29-50 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
73 | oan-mir-30b | Ornithorhynchus anatinus | oan-miR-30b* | 20/20 | Contig510 | + | 67-86 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
74 | oan-mir-30c | Ornithorhynchus anatinus | oan-miR-30c | 24/24 | Contig1501 | - | 31-54 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
75 | oan-mir-30c | Ornithorhynchus anatinus | oan-miR-30c* | 22/22 | Contig1501 | - | 70-91 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
76 | oan-mir-30d | Ornithorhynchus anatinus | oan-miR-30d* | 22/22 | Contig510 | + | 69-90 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
77 | oan-mir-30d | Ornithorhynchus anatinus | oan-miR-30d | 23/23 | Contig510 | + | 29-51 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
78 | oan-mir-30e | Ornithorhynchus anatinus | oan-miR-30e | 23/23 | Ultra467 | - | 16-38 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
79 | oan-mir-30e | Ornithorhynchus anatinus | oan-miR-30e* | 22/22 | Ultra467 | - | 57-78 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
80 | oan-mir-30f | Ornithorhynchus anatinus | oan-miR-30f | 22/22 | Contig4944 | + | 30-51 | N/A | - | miRBase_13_0 | 21/38 | 7/186 |
81 | ppa-mir-30a | Pan paniscus | ppa-miR-30a-3p | 22/22 | N/A | N/A | 47-68 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
82 | ppa-mir-30a | Pan paniscus | ppa-miR-30a-5p | 22/22 | N/A | N/A | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
83 | ppa-mir-30b | Pan paniscus | ppa-miR-30b | 21/21 | N/A | N/A | 17-37 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
84 | ppa-mir-30d | Pan paniscus | ppa-miR-30d | 22/22 | N/A | N/A | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
85 | ptr-mir-30a | Pan troglodytes | ptr-miR-30a-5p | 22/22 | chr6 | - | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
86 | ptr-mir-30a | Pan troglodytes | ptr-miR-30a-3p | 22/22 | chr6 | - | 47-68 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
87 | ptr-mir-30b | Pan troglodytes | ptr-miR-30b | 21/21 | chr8 | - | 17-37 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
88 | ptr-mir-30c-1 | Pan troglodytes | ptr-miR-30c | 23/23 | chr1 | + | 16-38 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
89 | ptr-mir-30c-2 | Pan troglodytes | ptr-miR-30c | 23/23 | chr6 | - | 7-29 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
90 | ptr-mir-30d | Pan troglodytes | ptr-miR-30d | 22/22 | chr8 | - | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
91 | ptr-mir-30e | Pan troglodytes | ptr-miR-30e | 22/22 | chr1 | + | 16-37 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
92 | ppy-mir-30a | Pongo pygmaeus | ppy-miR-30a-3p | 22/22 | N/A | N/A | 47-68 | N/A | - | miRBase_13_0 | 21/38 | 1/186 |
93 | ppy-mir-30a | Pongo pygmaeus | ppy-miR-30a-5p | 22/22 | N/A | N/A | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 1/186 |
94 | rno-mir-30a | Rattus norvegicus | rno-miR-30a* | 22/22 | chr9 | + | 47-68 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
95 | rno-mir-30a | Rattus norvegicus | rno-miR-30a | 22/22 | chr9 | + | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
96 | rno-mir-30b | Rattus norvegicus | rno-miR-30b-3p | 22/22 | chr7 | - | 54-75 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
97 | rno-mir-30b | Rattus norvegicus | rno-miR-30b-5p | 22/22 | chr7 | - | 16-37 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
98 | rno-mir-30c-1 | Rattus norvegicus | rno-miR-30c | 23/23 | chr5 | - | 17-39 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
99 | rno-mir-30c-1 | Rattus norvegicus | rno-miR-30c-1* | 22/22 | chr5 | - | 56-77 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
100 | rno-mir-30c-2 | Rattus norvegicus | rno-miR-30c-2* | 22/22 | chr9 | + | 54-75 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
101 | rno-mir-30c-2 | Rattus norvegicus | rno-miR-30c | 23/23 | chr9 | + | 14-36 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
102 | rno-mir-30d | Rattus norvegicus | rno-miR-30d* | 22/22 | chr7 | - | 52-73 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
103 | rno-mir-30d | Rattus norvegicus | rno-miR-30d | 22/22 | chr7 | - | 12-33 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
104 | rno-mir-30e | Rattus norvegicus | rno-miR-30e* | 22/22 | chr5 | - | 59-80 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
105 | rno-mir-30e | Rattus norvegicus | rno-miR-30e | 22/22 | chr5 | - | 17-38 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
106 | ssc-mir-30a | Sus scrofa | ssc-miR-30a | 22/22 | chr1 | - | 21-42 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
107 | ssc-mir-30b | Sus scrofa | ssc-miR-30b | 22/22 | chr4 | + | 11-32 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
108 | ssc-mir-30c | Sus scrofa | ssc-miR-30c | 23/23 | chr1 | + | 10-32 | N/A | - | miRBase_13_0 | 21/38 | 3/186 |
109 | tni-mir-30b | Tetraodon nigroviridis | tni-miR-30b | 22/22 | chr21 | + | 7-28 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
110 | tni-mir-30c | Tetraodon nigroviridis | tni-miR-30c | 22/22 | chrUn_random | + | 10-31 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
111 | tni-mir-30d | Tetraodon nigroviridis | tni-miR-30d | 22/22 | chr21 | + | 15-36 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
112 | xtr-mir-30a | Xenopus tropicalis | xtr-miR-30a-5p | 22/22 | scaffold_268 | + | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
113 | xtr-mir-30a | Xenopus tropicalis | xtr-miR-30a-3p | 22/22 | scaffold_268 | + | 47-68 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
114 | xtr-mir-30b | Xenopus tropicalis | xtr-miR-30b | 22/22 | scaffold_21 | - | 12-33 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
115 | xtr-mir-30c-1 | Xenopus tropicalis | xtr-miR-30c | 23/23 | scaffold_377 | - | 17-39 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
116 | xtr-mir-30c-2 | Xenopus tropicalis | xtr-miR-30c | 23/23 | scaffold_268 | + | 14-36 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
117 | xtr-mir-30d | Xenopus tropicalis | xtr-miR-30d | 22/22 | scaffold_21 | - | 11-32 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
118 | xtr-mir-30e | Xenopus tropicalis | xtr-miR-30e | 22/22 | scaffold_377 | - | 17-38 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
Total | 118 record(s). |