- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | danRer5-90 | Danio rerio | xtr-miR-30a-3p | 21/22 | chr19 | + | 51-72 | 38895545-38895620 | 0.996627 | Paralog | 21/38 | 7/186 |
2 | danRer5-90 | Danio rerio | dre-miR-30e | 22/22 | chr19 | + | 7-28 | 38895545-38895620 | 0.998844 | Paralog | 21/38 | 7/186 |
3 | danRer5-90 | Danio rerio | gga-miR-30e | 19/19 | chr19 | + | 7-25 | 38895544-38895619 | 0.999075 | Paralog | 21/38 | 7/186 |
4 | danRer5-90 | Danio rerio | bta-miR-30a-5p | 23/24 | chr19 | + | 8-31 | 38895544-38895621 | 0.999376 | Paralog | 21/38 | 7/186 |
5 | danRer5-90 | Danio rerio | oan-miR-30e | 23/23 | chr19 | + | 8-30 | 38895544-38895621 | 0.998967 | Paralog | 21/38 | 7/186 |
6 | danRer5-92 | Danio rerio | gga-miR-30c | 24/24 | chr19 | + | 16-39 | 38897455-38897540 | 0.999863 | Paralog | 21/38 | 7/186 |
7 | danRer5-92 | Danio rerio | dre-miR-30c | 22/22 | chr19 | + | 15-36 | 38897456-38897539 | 0.99986 | Paralog | 21/38 | 7/186 |
8 | danRer5-92 | Danio rerio | hsa-miR-30c | 23/23 | chr19 | + | 16-38 | 38897455-38897540 | 0.999783 | Paralog | 21/38 | 7/186 |
9 | fr2-241 | Fugu rubripes | fru-miR-30b | 22/22 | chrUn | - | 12-33 | 129444946-129445028 | 0.988939 | Paralog | 21/38 | 7/186 |
10 | fr2-242 | Fugu rubripes | bta-miR-30a-5p | 23/24 | chrUn | - | 16-39 | 129445120-129445206 | 0.99623 | Paralog | 21/38 | 7/186 |
11 | fr2-46 | Fugu rubripes | mmu-miR-30e | 22/22 | chrUn | + | 8-29 | 105741030-105741106 | 0.99928 | Paralog | 21/38 | 7/186 |
12 | fr2-46 | Fugu rubripes | oan-miR-30e | 23/23 | chrUn | + | 8-30 | 105741030-105741106 | 0.998887 | Paralog | 21/38 | 7/186 |
13 | fr2-46 | Fugu rubripes | bta-miR-30a-5p | 23/24 | chrUn | + | 8-31 | 105741030-105741106 | 0.999327 | Paralog | 21/38 | 7/186 |
14 | fr2-46 | Fugu rubripes | cfa-miR-30e | 22/22 | chrUn | + | 51-72 | 105741030-105741106 | 0.998881 | Paralog | 21/38 | 7/186 |
15 | fr2-96 | Fugu rubripes | mmu-miR-30e | 22/22 | chrUn | + | 12-33 | 186074225-186074305 | 0.999817 | Paralog | 21/38 | 7/186 |
16 | monDom4-190 | Monodelphis domestica | dre-miR-30c | 22/22 | chr2 | - | 16-37 | 322643022-322643108 | 0.932259 | Paralog | 21/38 | 6/186 |
17 | monDom4-190 | Monodelphis domestica | gga-miR-30c | 24/24 | chr2 | - | 16-39 | 322643022-322643108 | 0.937545 | Paralog | 21/38 | 6/186 |
18 | monDom4-190 | Monodelphis domestica | hsa-miR-30c | 23/23 | chr2 | - | 16-38 | 322643022-322643108 | 0.904906 | Paralog | 21/38 | 6/186 |
19 | monDom4-191 | Monodelphis domestica | xtr-miR-30a-3p | 21/22 | chr2 | - | 49-70 | 322692510-322692583 | 0.9998 | Paralog | 21/38 | 6/186 |
20 | monDom4-191 | Monodelphis domestica | bta-miR-30a-5p | 24/24 | chr2 | - | 12-35 | 322692505-322692588 | 0.999977 | Paralog | 21/38 | 6/186 |
21 | monDom4-191 | Monodelphis domestica | mdo-miR-30a | 22/22 | chr2 | - | 11-32 | 322692506-322692587 | 0.999958 | Paralog | 21/38 | 6/186 |
22 | monDom4-191 | Monodelphis domestica | oan-miR-30a | 23/23 | chr2 | - | 11-33 | 322692506-322692587 | 0.999939 | Paralog | 21/38 | 6/186 |
23 | monDom4-268 | Monodelphis domestica | mmu-miR-30b | 22/22 | chr3 | - | 17-38 | 414604721-414604808 | 0.998907 | Paralog | 21/38 | 6/186 |
24 | monDom4-315 | Monodelphis domestica | gga-miR-30e | 19/19 | chr4 | + | 8-26 | 419707517-419707592 | 0.999962 | Paralog | 21/38 | 6/186 |
25 | monDom4-315 | Monodelphis domestica | cfa-miR-30e | 22/22 | chr4 | + | 51-72 | 419707516-419707593 | 0.999961 | Paralog | 21/38 | 6/186 |
26 | monDom4-315 | Monodelphis domestica | mmu-miR-30e | 22/22 | chr4 | + | 9-30 | 419707516-419707593 | 0.999976 | Paralog | 21/38 | 6/186 |
27 | monDom4-315 | Monodelphis domestica | oan-miR-30e | 23/23 | chr4 | + | 9-31 | 419707516-419707593 | 0.999967 | Paralog | 21/38 | 6/186 |
28 | monDom4-315 | Monodelphis domestica | bta-miR-30a-5p | 23/24 | chr4 | + | 9-32 | 419707516-419707593 | 0.999978 | Paralog | 21/38 | 6/186 |
29 | monDom4-317 | Monodelphis domestica | dre-miR-30c | 22/22 | chr4 | + | 14-35 | 419711143-419711225 | 0.992923 | Paralog | 21/38 | 6/186 |
30 | monDom4-317 | Monodelphis domestica | gga-miR-30c | 24/24 | chr4 | + | 15-38 | 419711142-419711226 | 0.991266 | Paralog | 21/38 | 6/186 |
31 | monDom4-317 | Monodelphis domestica | hsa-miR-30c | 23/23 | chr4 | + | 15-37 | 419711142-419711226 | 0.987636 | Paralog | 21/38 | 6/186 |
32 | mm9-204 | Mus musculus | xtr-miR-30a-3p | 20/22 | chr15 | + | 50-70 | 101369082-101369160 | 0.921879 | Paralog | 21/38 | 7/186 |
33 | ornAna1-212 | Ornithorhynchus anatinus | mmu-miR-30c-1* | 22/22 | Ultra467 | - | 49-70 | 480335-480412 | 0.998568 | Paralog | 21/38 | 7/186 |
34 | tetNig1-122 | Tetraodon nigroviridis | oan-miR-30e | 23/23 | chr21 | + | 10-32 | 1381049-1381128 | 0.999199 | Paralog | 21/38 | 6/186 |
35 | tetNig1-122 | Tetraodon nigroviridis | bta-miR-30a-5p | 23/24 | chr21 | + | 10-33 | 1381049-1381128 | 0.999517 | Paralog | 21/38 | 6/186 |
36 | tetNig1-122 | Tetraodon nigroviridis | gga-miR-30e | 19/19 | chr21 | + | 7-25 | 1381052-1381126 | 0.999174 | Paralog | 21/38 | 6/186 |
37 | tetNig1-122 | Tetraodon nigroviridis | mmu-miR-30e | 22/22 | chr21 | + | 8-29 | 1381051-1381127 | 0.99928 | Paralog | 21/38 | 6/186 |
38 | tetNig1-125 | Tetraodon nigroviridis | gga-miR-30c | 24/24 | chr21 | + | 14-37 | 1381256-1381339 | 0.999867 | Paralog | 21/38 | 6/186 |
39 | tetNig1-125 | Tetraodon nigroviridis | dre-miR-30c | 22/22 | chr21 | + | 13-34 | 1381257-1381338 | 0.99987 | Paralog | 21/38 | 6/186 |
40 | tetNig1-125 | Tetraodon nigroviridis | hsa-miR-30c | 23/23 | chr21 | + | 14-36 | 1381256-1381339 | 0.999791 | Paralog | 21/38 | 6/186 |
41 | tetNig1-88 | Tetraodon nigroviridis | mmu-miR-30e | 22/22 | chr17 | + | 14-35 | 8459237-8459319 | 0.999525 | Paralog | 21/38 | 6/186 |
42 | tetNig1-88 | Tetraodon nigroviridis | bta-miR-30a-5p | 23/24 | chr17 | + | 14-37 | 8459238-8459320 | 0.999603 | Paralog | 21/38 | 6/186 |
43 | tetNig1-88 | Tetraodon nigroviridis | oan-miR-30e | 23/23 | chr17 | + | 14-36 | 8459238-8459320 | 0.999751 | Paralog | 21/38 | 6/186 |
Total | 43 record(s). |