- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-320 | Bos taurus | bta-miR-320 | 22/22 | chr20 | + | 48-69 | N/A | - | miRBase_13_0 | 8/16 | 1/38 |
2 | calJac1-103 | Callithrix jacchus | hsa-miR-320a | 22/22 | Contig150 | - | 40-61 | 820140-820203 | 0.996815 | Ortholog | 8/16 | 6/38 |
3 | calJac1-302 | Callithrix jacchus | hsa-miR-320a | 22/22 | Contig2227 | + | 51-72 | 183004-183092 | 0.992808 | Ortholog | 8/16 | 6/38 |
4 | calJac1-488 | Callithrix jacchus | hsa-miR-320a | 20/22 | Contig4800 | - | 42-61 | 137863-137932 | 0.995599 | Ortholog | 8/16 | 6/38 |
5 | calJac1-488 | Callithrix jacchus | hsa-miR-320b | 22/22 | Contig4800 | - | 42-63 | 137863-137932 | 0.996313 | Ortholog | 8/16 | 6/38 |
6 | calJac1-543 | Callithrix jacchus | hsa-miR-320a | 20/22 | Contig537 | + | 36-55 | 734961-735018 | 0.998539 | Ortholog | 8/16 | 6/38 |
7 | calJac1-552 | Callithrix jacchus | hsa-miR-320a | 20/22 | Contig5482 | - | 39-58 | 127565-127635 | 0.919915 | Ortholog | 8/16 | 6/38 |
8 | calJac1-552 | Callithrix jacchus | hsa-miR-320b | 22/22 | Contig5482 | - | 39-60 | 127565-127635 | 0.916584 | Ortholog | 8/16 | 6/38 |
9 | calJac1-98 | Callithrix jacchus | hsa-miR-320a | 22/22 | Contig1484 | + | 43-64 | 365658-365727 | 0.996275 | Ortholog | 8/16 | 6/38 |
10 | canFam2-267 | Canis familiaris | xtr-miR-320 | 19/21 | chr7 | + | 24-43 | 74456160-74456251 | 0.868415 | Paralog | 8/16 | 2/38 |
11 | cfa-mir-320 | Canis familiaris | cfa-miR-320 | 22/22 | chr25 | + | 33-54 | N/A | - | miRBase_13_0 | 8/16 | 2/38 |
12 | cavPor3-23 | Cavia porcellus | hsa-miR-320a | 22/22 | scaffold_1 | - | 49-70 | 59045812-59045895 | 0.996906 | Ortholog | 8/16 | 1/38 |
13 | cavPor3-23 | Cavia porcellus | ptr-miR-320d | 18/18 | scaffold_1 | - | 51-68 | 59045799-59045897 | 0.850393 | Ortholog | 8/16 | 1/38 |
14 | dasNov1-311 | Dasypus novemcinctus | hsa-miR-320a | 22/22 | scaffold_60968 | + | 51-72 | N/A | 0.997492 | Ortholog | 8/16 | 1/38 |
15 | echTel1-398 | Echinops telfari | hsa-miR-320a | 22/22 | scaffold_55660 | + | 51-72 | N/A | 0.993107 | Ortholog | 8/16 | 1/38 |
16 | equCab1-678 | Equus caballus | hsa-miR-320a | 22/22 | chrUn | - | 49-70 | 44419421-44419505 | 0.997765 | Ortholog | 8/16 | 1/38 |
17 | equCab1-678 | Equus caballus | ptr-miR-320d | 18/18 | chrUn | - | 51-68 | 44419419-44419507 | 0.998555 | Ortholog | 8/16 | 1/38 |
18 | hsa-mir-320a | Homo sapiens | hsa-miR-320a | 22/22 | chr8 | - | 48-69 | 22158420-22158501 | - | miRBase_13_0 | 8/16 | 7/38 |
19 | hsa-mir-320b-1 | Homo sapiens | hsa-miR-320b | 22/22 | chr1 | + | 39-60 | 117015894-117015972 | - | miRBase_13_0 | 8/16 | 7/38 |
20 | hsa-mir-320b-2 | Homo sapiens | hsa-miR-320b | 22/22 | chr1 | - | 72-93 | 222511329-222511466 | - | miRBase_13_0 | 8/16 | 7/38 |
21 | hsa-mir-320c-1 | Homo sapiens | hsa-miR-320c | 20/20 | chr18 | + | 50-69 | 17517469-17517556 | - | miRBase_13_0 | 8/16 | 7/38 |
22 | hsa-mir-320c-2 | Homo sapiens | hsa-miR-320c | 20/20 | chr18 | + | 31-50 | 20155648-20155697 | - | miRBase_13_0 | 8/16 | 7/38 |
23 | hsa-mir-320d-1 | Homo sapiens | hsa-miR-320d | 19/19 | chr13 | - | 30-48 | 40199964-40200011 | - | miRBase_13_0 | 8/16 | 7/38 |
24 | hsa-mir-320d-2 | Homo sapiens | hsa-miR-320d | 19/19 | chrX | - | 30-48 | 139836003-139836050 | - | miRBase_13_0 | 8/16 | 7/38 |
25 | mml-mir-320 | Macaca mulatta | mml-miR-320 | 22/22 | chr8 | - | 48-69 | N/A | - | miRBase_13_0 | 8/16 | 2/38 |
26 | rheMac2-9 | Macaca mulatta | ptr-miR-320d | 18/18 | chr1 | + | 45-62 | 146238863-146238940 | 0.998368 | Paralog | 8/16 | 2/38 |
27 | rheMac2-9 | Macaca mulatta | hsa-miR-320b | 22/22 | chr1 | + | 45-66 | 146238863-146238940 | 0.997743 | Paralog | 8/16 | 2/38 |
28 | rheMac2-9 | Macaca mulatta | mml-miR-320 | 20/22 | chr1 | + | 45-64 | 146238863-146238940 | 0.996851 | Paralog | 8/16 | 2/38 |
29 | monDom4-376 | Monodelphis domestica | xtr-miR-320 | 20/21 | chr6 | + | 32-52 | 204071423-204071521 | 0.907907 | Ortholog | 8/16 | 1/38 |
30 | mmu-mir-320 | Mus musculus | mmu-miR-320 | 22/22 | chr14 | + | 48-69 | N/A | - | miRBase_13_0 | 8/16 | 1/38 |
31 | ptr-mir-320a | Pan troglodytes | ptr-miR-320a | 22/22 | chr8 | - | 48-69 | N/A | - | miRBase_13_0 | 8/16 | 8/38 |
32 | ptr-mir-320b-1 | Pan troglodytes | ptr-miR-320b | 22/22 | chr1 | - | 39-60 | N/A | - | miRBase_13_0 | 8/16 | 8/38 |
33 | ptr-mir-320b-2 | Pan troglodytes | ptr-miR-320b | 22/22 | chr1 | - | 72-93 | N/A | - | miRBase_13_0 | 8/16 | 8/38 |
34 | ptr-mir-320c-1 | Pan troglodytes | ptr-miR-320c | 20/20 | chr18 | + | 49-68 | N/A | - | miRBase_13_0 | 8/16 | 8/38 |
35 | ptr-mir-320c-2 | Pan troglodytes | ptr-miR-320c | 20/20 | chr18 | + | 30-49 | N/A | - | miRBase_13_0 | 8/16 | 8/38 |
36 | ptr-mir-320d-1 | Pan troglodytes | ptr-miR-320d | 18/18 | chr13_random | - | 30-47 | N/A | - | miRBase_13_0 | 8/16 | 8/38 |
37 | ptr-mir-320d-2 | Pan troglodytes | ptr-miR-320d | 18/18 | chr8 | + | 29-46 | N/A | - | miRBase_13_0 | 8/16 | 8/38 |
38 | ptr-mir-320d-3 | Pan troglodytes | ptr-miR-320d | 18/18 | chrX | - | 30-47 | N/A | - | miRBase_13_0 | 8/16 | 8/38 |
39 | ponAbe2-329 | Pongo abelii | hsa-miR-320c | 20/20 | chr18 | + | 52-71 | 33389941-33390045 | 0.938555 | Ortholog | 8/16 | 3/38 |
40 | ponAbe2-330 | Pongo abelii | hsa-miR-320c | 20/20 | chr18 | + | 49-68 | 35989113-35989208 | 0.977231 | Ortholog | 8/16 | 3/38 |
41 | ponAbe2-719 | Pongo abelii | hsa-miR-320a | 22/22 | chr8 | - | 49-70 | 21813764-21813847 | 0.996176 | Ortholog | 8/16 | 3/38 |
42 | rno-mir-320 | Rattus norvegicus | rno-miR-320 | 22/22 | chr15 | + | 48-69 | N/A | - | miRBase_13_0 | 8/16 | 1/38 |
43 | sorAra1-165 | Sorex araneus | hsa-miR-320a | 22/22 | scaffold_248175 | - | 49-70 | N/A | 0.995596 | Ortholog | 8/16 | 1/38 |
44 | xtr-mir-320 | Xenopus tropicalis | xtr-miR-320 | 21/21 | scaffold_207 | - | 71-91 | N/A | - | miRBase_13_0 | 8/16 | 1/38 |
Total | 44 record(s). |