- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | braFlo1-92 | Branchiostoma floridae | cfa-miR-329a | 21/23 | chrUn | - | 27-49 | 13790823-13790915 | 0.923573 | Ortholog | 7/20 | 1/33 |
2 | calJac1-278 | Callithrix jacchus | cfa-miR-329a | 22/23 | Contig2207 | - | 17-39 | 246404-246491 | 0.996483 | Ortholog | 7/20 | 1/33 |
3 | cavPor3-103 | Cavia porcellus | cfa-miR-329a | 23/23 | scaffold_111 | + | 13-35 | 1086604-1086685 | 0.998709 | Ortholog | 7/20 | 2/33 |
4 | cavPor3-103 | Cavia porcellus | hsa-miR-329 | 20/22 | scaffold_111 | + | 51-72 | 1086604-1086685 | 0.996516 | Ortholog | 7/20 | 2/33 |
5 | cavPor3-200 | Cavia porcellus | cfa-miR-329a | 21/23 | scaffold_13 | + | 50-72 | 17262693-17262778 | 0.927628 | Ortholog | 7/20 | 2/33 |
6 | dasNov1-158 | Dasypus novemcinctus | cfa-miR-329a | 21/23 | scaffold_25822 | - | 46-68 | N/A | 0.957064 | Ortholog | 7/20 | 3/33 |
7 | dasNov1-281 | Dasypus novemcinctus | cfa-miR-329a | 23/23 | scaffold_5303 | - | 15-37 | N/A | 0.99923 | Ortholog | 7/20 | 3/33 |
8 | dasNov1-281 | Dasypus novemcinctus | bta-miR-329a | 21/22 | scaffold_5303 | - | 49-70 | N/A | 0.9983 | Ortholog | 7/20 | 3/33 |
9 | dasNov1-348 | Dasypus novemcinctus | cfa-miR-329a | 21/23 | scaffold_78049 | + | 11-33 | N/A | 0.984872 | Ortholog | 7/20 | 3/33 |
10 | echTel1-211 | Echinops telfari | cfa-miR-329a | 22/23 | scaffold_293632 | + | 13-35 | N/A | 0.999289 | Ortholog | 7/20 | 1/33 |
11 | echTel1-211 | Echinops telfari | hsa-miR-329 | 21/22 | scaffold_293632 | + | 51-72 | N/A | 0.993036 | Ortholog | 7/20 | 1/33 |
12 | equCab1-334 | Equus caballus | bta-miR-329a | 20/22 | chr24 | + | 51-72 | 42398445-42398526 | 0.998889 | Ortholog | 7/20 | 2/33 |
13 | equCab1-334 | Equus caballus | cfa-miR-329a | 23/23 | chr24 | + | 13-35 | 42398445-42398526 | 0.999049 | Ortholog | 7/20 | 2/33 |
14 | equCab1-335 | Equus caballus | cfa-miR-329a | 21/23 | chr24 | + | 14-36 | 42398758-42398841 | 0.999216 | Ortholog | 7/20 | 2/33 |
15 | eriEur1-254 | Erinaceus europaeus | cfa-miR-329a | 22/23 | scaffold_366365 | + | 12-34 | N/A | 0.947666 | Ortholog | 7/20 | 1/33 |
16 | felCat3-411 | Felis catus | cfa-miR-329a | 21/23 | scaffold_217634 | - | 49-71 | 38765-38848 | 0.981132 | Ortholog | 7/20 | 2/33 |
17 | felCat3-93 | Felis catus | bta-miR-329a | 21/22 | scaffold_147198 | + | 51-72 | 13893-13974 | 0.999591 | Ortholog | 7/20 | 2/33 |
18 | loxAfr1-242 | Loxodonta africana | bta-miR-329a | 21/22 | scaffold_44287 | - | 49-70 | N/A | 0.993494 | Ortholog | 7/20 | 1/33 |
19 | loxAfr1-242 | Loxodonta africana | cfa-miR-329a | 21/23 | scaffold_44287 | - | 16-38 | N/A | 0.952022 | Ortholog | 7/20 | 1/33 |
20 | oryCun1-133 | Oryctolagus cuniculus | cfa-miR-329a | 23/23 | scaffold_168327 | + | 13-35 | N/A | 0.998473 | Ortholog | 7/20 | 1/33 |
21 | oryCun1-133 | Oryctolagus cuniculus | hsa-miR-329 | 21/22 | scaffold_168327 | + | 51-72 | N/A | 0.995295 | Ortholog | 7/20 | 1/33 |
22 | otoGar1-154 | Otolemur garnettii | cfa-miR-329a | 23/23 | scaffold_116158.1-127804 | + | 13-35 | N/A | 0.998577 | Ortholog | 7/20 | 2/33 |
23 | otoGar1-154 | Otolemur garnettii | bta-miR-329a | 21/22 | scaffold_116158.1-127804 | + | 51-72 | N/A | 0.997608 | Ortholog | 7/20 | 2/33 |
24 | otoGar1-155 | Otolemur garnettii | hsa-miR-329 | 21/22 | scaffold_116158.1-127804 | + | 50-71 | N/A | 0.919317 | Ortholog | 7/20 | 2/33 |
25 | ponAbe2-208 | Pongo abelii | bta-miR-329a | 21/22 | chr14 | + | 51-72 | 102588198-102588279 | 0.997608 | Ortholog | 7/20 | 2/33 |
26 | ponAbe2-209 | Pongo abelii | bta-miR-329a | 21/22 | chr14 | + | 51-72 | 102588515-102588596 | 0.997608 | Ortholog | 7/20 | 2/33 |
27 | tupBel1-644 | Tupaia belangeri | bta-miR-329a | 21/22 | scaffold_146327.1-70409 | + | 51-72 | N/A | 0.997608 | Ortholog | 7/20 | 1/33 |
28 | tupBel1-644 | Tupaia belangeri | cfa-miR-329a | 23/23 | scaffold_146327.1-70409 | + | 15-37 | N/A | 0.998577 | Ortholog | 7/20 | 1/33 |
Total | 28 record(s). |