- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-203 | Anolis carolinensis | bfl-miR-33 | 20/22 | scaffold_33 | + | 23-44 | 1799361-1799451 | 0.83525 | Ortholog | 34/54 | 2/96 |
2 | anoCar1-75 | Anolis carolinensis | gga-miR-33 | 20/20 | scaffold_1323 | + | 13-32 | 18906-18986 | 0.999855 | Ortholog | 34/54 | 2/96 |
3 | anoCar1-75 | Anolis carolinensis | dme-miR-33 | 19/21 | scaffold_1323 | + | 11-30 | 18907-18985 | 0.999814 | Ortholog | 34/54 | 2/96 |
4 | anoCar1-75 | Anolis carolinensis | hsa-miR-33a | 21/21 | scaffold_1323 | + | 14-34 | 18905-18987 | 0.999931 | Ortholog | 34/54 | 2/96 |
5 | anoCar1-75 | Anolis carolinensis | mml-miR-33a | 19/19 | scaffold_1323 | + | 13-31 | 18906-18986 | 0.999893 | Ortholog | 34/54 | 2/96 |
6 | anoGam1-294 | Anopheles gambiae | dme-miR-33 | 19/21 | chrX | - | 7-26 | 1256008-1256084 | 0.999605 | Ortholog | 34/54 | 1/96 |
7 | anoGam1-294 | Anopheles gambiae | spu-miR-33 | 20/22 | chrX | - | 8-28 | 1256008-1256084 | 0.999842 | Ortholog | 34/54 | 1/96 |
8 | anoGam1-294 | Anopheles gambiae | mml-miR-33a | 19/19 | chrX | - | 8-26 | 1256008-1256084 | 0.999825 | Ortholog | 34/54 | 1/96 |
9 | anoGam1-294 | Anopheles gambiae | gga-miR-33 | 20/20 | chrX | - | 8-27 | 1256008-1256084 | 0.999741 | Ortholog | 34/54 | 1/96 |
10 | calJac1-670 | Callithrix jacchus | hsa-miR-33a | 21/21 | Contig998 | + | 12-32 | 460729-460809 | 0.999961 | Ortholog | 34/54 | 2/96 |
11 | calJac1-670 | Callithrix jacchus | hsa-miR-33a* | 22/22 | Contig998 | + | 51-72 | 460730-460808 | 0.999814 | Ortholog | 34/54 | 2/96 |
12 | calJac1-670 | Callithrix jacchus | spu-miR-33 | 21/22 | Contig998 | + | 12-33 | 460729-460809 | 0.999967 | Ortholog | 34/54 | 2/96 |
13 | calJac1-87 | Callithrix jacchus | hsa-miR-33b | 20/20 | Contig1422 | - | 42-61 | 304152-304260 | 0.928479 | Ortholog | 34/54 | 2/96 |
14 | cavPor3-413 | Cavia porcellus | hsa-miR-33a* | 22/22 | scaffold_28 | + | 51-72 | 25329238-25329317 | 0.999882 | Ortholog | 34/54 | 2/96 |
15 | cavPor3-413 | Cavia porcellus | hsa-miR-33a | 21/21 | scaffold_28 | + | 13-33 | 25329237-25329318 | 0.99997 | Ortholog | 34/54 | 2/96 |
16 | cavPor3-413 | Cavia porcellus | spu-miR-33 | 21/22 | scaffold_28 | + | 13-34 | 25329237-25329318 | 0.999974 | Ortholog | 34/54 | 2/96 |
17 | cavPor3-683 | Cavia porcellus | hsa-miR-33b* | 22/22 | scaffold_65 | - | 49-70 | 1533824-1533900 | 0.992259 | Ortholog | 34/54 | 2/96 |
18 | cavPor3-683 | Cavia porcellus | spu-miR-33 | 20/22 | scaffold_65 | - | 38-59 | 1533819-1533927 | 0.9983 | Ortholog | 34/54 | 2/96 |
19 | echTel1-244 | Echinops telfari | spu-miR-33 | 20/22 | scaffold_301390 | + | 13-33 | N/A | 0.999971 | Ortholog | 34/54 | 1/96 |
20 | echTel1-244 | Echinops telfari | mml-miR-33a | 19/19 | scaffold_301390 | + | 12-30 | N/A | 0.999955 | Ortholog | 34/54 | 1/96 |
21 | echTel1-244 | Echinops telfari | gga-miR-33 | 20/20 | scaffold_301390 | + | 12-31 | N/A | 0.999938 | Ortholog | 34/54 | 1/96 |
22 | echTel1-244 | Echinops telfari | hsa-miR-33a* | 20/22 | scaffold_301390 | + | 52-71 | N/A | 0.99993 | Ortholog | 34/54 | 1/96 |
23 | equCab1-420 | Equus caballus | hsa-miR-33a | 21/21 | chr28 | + | 12-32 | 38147762-38147842 | 0.999964 | Ortholog | 34/54 | 2/96 |
24 | equCab1-420 | Equus caballus | gga-miR-33 | 20/20 | chr28 | + | 11-30 | 38147763-38147841 | 0.999926 | Ortholog | 34/54 | 2/96 |
25 | equCab1-420 | Equus caballus | mml-miR-33a | 19/19 | chr28 | + | 11-29 | 38147763-38147841 | 0.999946 | Ortholog | 34/54 | 2/96 |
26 | equCab1-420 | Equus caballus | spu-miR-33 | 21/22 | chr28 | + | 12-33 | 38147762-38147842 | 0.999969 | Ortholog | 34/54 | 2/96 |
27 | equCab1-420 | Equus caballus | hsa-miR-33a* | 22/22 | chr28 | + | 51-72 | 38147763-38147841 | 0.99983 | Ortholog | 34/54 | 2/96 |
28 | equCab1-659 | Equus caballus | hsa-miR-33b | 20/20 | chrUn | + | 38-57 | 245936045-245936150 | 0.889849 | Ortholog | 34/54 | 2/96 |
29 | eriEur1-33 | Erinaceus europaeus | spu-miR-33 | 21/22 | scaffold_220119 | + | 12-33 | N/A | 0.999955 | Ortholog | 34/54 | 1/96 |
30 | eriEur1-33 | Erinaceus europaeus | hsa-miR-33a | 21/21 | scaffold_220119 | + | 12-32 | N/A | 0.999946 | Ortholog | 34/54 | 1/96 |
31 | eriEur1-33 | Erinaceus europaeus | gga-miR-33 | 20/20 | scaffold_220119 | + | 11-30 | N/A | 0.999886 | Ortholog | 34/54 | 1/96 |
32 | eriEur1-33 | Erinaceus europaeus | mml-miR-33a | 19/19 | scaffold_220119 | + | 11-29 | N/A | 0.999921 | Ortholog | 34/54 | 1/96 |
33 | eriEur1-33 | Erinaceus europaeus | hsa-miR-33a* | 22/22 | scaffold_220119 | + | 51-72 | N/A | 0.999736 | Ortholog | 34/54 | 1/96 |
34 | felCat3-199 | Felis catus | mml-miR-33a | 19/19 | scaffold_166312 | + | 11-29 | 132594-132672 | 0.99995 | Ortholog | 34/54 | 2/96 |
35 | felCat3-199 | Felis catus | hsa-miR-33a* | 22/22 | scaffold_166312 | + | 51-72 | 132594-132672 | 0.999847 | Ortholog | 34/54 | 2/96 |
36 | felCat3-199 | Felis catus | spu-miR-33 | 21/22 | scaffold_166312 | + | 12-33 | 132593-132673 | 0.999972 | Ortholog | 34/54 | 2/96 |
37 | felCat3-199 | Felis catus | hsa-miR-33a | 21/21 | scaffold_166312 | + | 12-32 | 132593-132673 | 0.999967 | Ortholog | 34/54 | 2/96 |
38 | felCat3-199 | Felis catus | gga-miR-33 | 20/20 | scaffold_166312 | + | 11-30 | 132594-132672 | 0.999932 | Ortholog | 34/54 | 2/96 |
39 | felCat3-329 | Felis catus | hsa-miR-33b | 20/20 | scaffold_207874 | + | 52-71 | 238844-238921 | 0.999935 | Ortholog | 34/54 | 2/96 |
40 | fr2-103 | Fugu rubripes | hsa-miR-33a | 21/21 | chrUn | + | 22-42 | 209733360-209733450 | 0.986775 | Ortholog | 34/54 | 1/96 |
41 | fr2-103 | Fugu rubripes | spu-miR-33 | 21/22 | chrUn | + | 22-43 | 209733360-209733450 | 0.98764 | Ortholog | 34/54 | 1/96 |
42 | fr2-103 | Fugu rubripes | mml-miR-33a | 19/19 | chrUn | + | 21-39 | 209733361-209733449 | 0.992123 | Ortholog | 34/54 | 1/96 |
43 | fr2-103 | Fugu rubripes | gga-miR-33 | 20/20 | chrUn | + | 21-40 | 209733361-209733449 | 0.984031 | Ortholog | 34/54 | 1/96 |
44 | fr2-103 | Fugu rubripes | dme-miR-33 | 19/21 | chrUn | + | 52-71 | 209733329-209733418 | 0.992015 | Ortholog | 34/54 | 1/96 |
45 | gasAcu1-296 | Gasterosteus aculeatus | hsa-miR-33a | 21/21 | chrV | + | 51-71 | 11138813-11138913 | 0.971487 | Ortholog | 34/54 | 3/96 |
46 | gasAcu1-296 | Gasterosteus aculeatus | gga-miR-33 | 20/20 | chrV | + | 52-71 | 11138812-11138912 | 0.939466 | Ortholog | 34/54 | 3/96 |
47 | gasAcu1-296 | Gasterosteus aculeatus | mml-miR-33a | 19/19 | chrV | + | 52-70 | 11138812-11138912 | 0.971053 | Ortholog | 34/54 | 3/96 |
48 | gasAcu1-296 | Gasterosteus aculeatus | dme-miR-33 | 19/21 | chrV | + | 52-71 | 11138811-11138914 | 0.945719 | Ortholog | 34/54 | 3/96 |
49 | gasAcu1-296 | Gasterosteus aculeatus | spu-miR-33 | 21/22 | chrV | + | 51-72 | 11138813-11138913 | 0.981547 | Ortholog | 34/54 | 3/96 |
50 | gasAcu1-431 | Gasterosteus aculeatus | gga-miR-33 | 20/20 | chrXI | + | 11-30 | 10973019-10973097 | 0.999945 | Ortholog | 34/54 | 3/96 |
51 | gasAcu1-431 | Gasterosteus aculeatus | mml-miR-33a | 19/19 | chrXI | + | 11-29 | 10973019-10973097 | 0.999955 | Ortholog | 34/54 | 3/96 |
52 | gasAcu1-431 | Gasterosteus aculeatus | hsa-miR-33a | 21/21 | chrXI | + | 12-32 | 10973018-10973098 | 0.999981 | Ortholog | 34/54 | 3/96 |
53 | gasAcu1-431 | Gasterosteus aculeatus | oan-miR-33a-3p | 18/20 | chrXI | + | 52-70 | 10973018-10973098 | 0.9997 | Ortholog | 34/54 | 3/96 |
54 | gasAcu1-431 | Gasterosteus aculeatus | spu-miR-33 | 21/22 | chrXI | + | 12-33 | 10973018-10973098 | 0.999983 | Ortholog | 34/54 | 3/96 |
55 | gasAcu1-437 | Gasterosteus aculeatus | spu-miR-33 | 21/22 | chrXI | - | 14-35 | 4111828-4111912 | 0.999966 | Ortholog | 34/54 | 3/96 |
56 | gasAcu1-437 | Gasterosteus aculeatus | hsa-miR-33a | 21/21 | chrXI | - | 13-33 | 4111829-4111911 | 0.999943 | Ortholog | 34/54 | 3/96 |
57 | gasAcu1-437 | Gasterosteus aculeatus | gga-miR-33 | 20/20 | chrXI | - | 13-32 | 4111829-4111911 | 0.999892 | Ortholog | 34/54 | 3/96 |
58 | gasAcu1-437 | Gasterosteus aculeatus | gga-miR-33* | 20/22 | chrXI | - | 49-70 | 4111831-4111909 | 0.999454 | Ortholog | 34/54 | 3/96 |
59 | gasAcu1-437 | Gasterosteus aculeatus | mml-miR-33a | 19/19 | chrXI | - | 12-30 | 4111830-4111910 | 0.999877 | Ortholog | 34/54 | 3/96 |
60 | gasAcu1-437 | Gasterosteus aculeatus | dme-miR-33 | 19/21 | chrXI | - | 11-30 | 4111830-4111910 | 0.999785 | Ortholog | 34/54 | 3/96 |
61 | loxAfr1-249 | Loxodonta africana | hsa-miR-33b | 20/20 | scaffold_45003 | + | 14-33 | N/A | 0.999899 | Ortholog | 34/54 | 1/96 |
62 | monDom4-474 | Monodelphis domestica | gga-miR-33 | 20/20 | chrUn | + | 12-31 | 99287025-99287104 | 0.999966 | Ortholog | 34/54 | 1/96 |
63 | monDom4-474 | Monodelphis domestica | hsa-miR-33a* | 20/22 | chrUn | + | 52-71 | 99287024-99287105 | 0.999953 | Ortholog | 34/54 | 1/96 |
64 | monDom4-474 | Monodelphis domestica | spu-miR-33 | 20/22 | chrUn | + | 13-33 | 99287024-99287105 | 0.99998 | Ortholog | 34/54 | 1/96 |
65 | monDom4-474 | Monodelphis domestica | mml-miR-33a | 19/19 | chrUn | + | 12-30 | 99287025-99287104 | 0.999973 | Ortholog | 34/54 | 1/96 |
66 | oryCun1-172 | Oryctolagus cuniculus | gga-miR-33* | 20/22 | scaffold_178626 | - | 16-36 | N/A | 0.984822 | Ortholog | 34/54 | 1/96 |
67 | oryLat2-388 | Oryzias latipes | spu-miR-33 | 21/22 | chr8 | + | 12-33 | 12694470-12694549 | 0.999962 | Ortholog | 34/54 | 1/96 |
68 | oryLat2-388 | Oryzias latipes | gga-miR-33 | 20/20 | chr8 | + | 12-31 | 12694470-12694549 | 0.999922 | Ortholog | 34/54 | 1/96 |
69 | oryLat2-388 | Oryzias latipes | hsa-miR-33a | 21/21 | chr8 | + | 12-32 | 12694470-12694549 | 0.999953 | Ortholog | 34/54 | 1/96 |
70 | oryLat2-388 | Oryzias latipes | xtr-miR-33b | 18/19 | chr8 | + | 12-30 | 12694470-12694549 | 0.999944 | Ortholog | 34/54 | 1/96 |
71 | otoGar1-405 | Otolemur garnettii | hsa-miR-33a | 21/21 | scaffold_86764.1-50214 | - | 13-33 | N/A | 0.999621 | Ortholog | 34/54 | 1/96 |
72 | otoGar1-405 | Otolemur garnettii | gga-miR-33 | 20/20 | scaffold_86764.1-50214 | - | 13-32 | N/A | 0.999335 | Ortholog | 34/54 | 1/96 |
73 | otoGar1-405 | Otolemur garnettii | hsa-miR-33a* | 20/22 | scaffold_86764.1-50214 | - | 50-70 | N/A | 0.998342 | Ortholog | 34/54 | 1/96 |
74 | otoGar1-405 | Otolemur garnettii | spu-miR-33 | 21/22 | scaffold_86764.1-50214 | - | 14-35 | N/A | 0.999662 | Ortholog | 34/54 | 1/96 |
75 | otoGar1-405 | Otolemur garnettii | mml-miR-33a | 19/19 | scaffold_86764.1-50214 | - | 12-30 | N/A | 0.999674 | Ortholog | 34/54 | 1/96 |
76 | petMar1-67 | Petromyzon marinus | spu-miR-33 | 20/22 | Contig35389 | - | 12-33 | 1154-1236 | 0.99575 | Ortholog | 34/54 | 2/96 |
77 | petMar1-67 | Petromyzon marinus | hsa-miR-33a | 20/21 | Contig35389 | - | 12-32 | 1156-1236 | 0.991709 | Ortholog | 34/54 | 2/96 |
78 | petMar1-67 | Petromyzon marinus | gga-miR-33 | 19/20 | Contig35389 | - | 12-31 | 1156-1236 | 0.988877 | Ortholog | 34/54 | 2/96 |
79 | petMar1-96 | Petromyzon marinus | dme-miR-33 | 19/21 | Contig6530 | + | 15-34 | 16019-16101 | 0.999926 | Ortholog | 34/54 | 2/96 |
80 | petMar1-96 | Petromyzon marinus | mml-miR-33a | 19/19 | Contig6530 | + | 16-34 | 16019-16101 | 0.999961 | Ortholog | 34/54 | 2/96 |
81 | petMar1-96 | Petromyzon marinus | spu-miR-33 | 20/22 | Contig6530 | + | 16-37 | 16019-16101 | 0.999981 | Ortholog | 34/54 | 2/96 |
82 | ponAbe2-523 | Pongo abelii | hsa-miR-33a | 21/21 | chr22 | + | 12-32 | 37169631-37169711 | 0.99995 | Ortholog | 34/54 | 1/96 |
83 | ponAbe2-523 | Pongo abelii | hsa-miR-33a* | 22/22 | chr22 | + | 51-72 | 37169632-37169710 | 0.999703 | Ortholog | 34/54 | 1/96 |
84 | ponAbe2-523 | Pongo abelii | spu-miR-33 | 21/22 | chr22 | + | 12-33 | 37169631-37169711 | 0.999959 | Ortholog | 34/54 | 1/96 |
85 | ponAbe2-523 | Pongo abelii | mml-miR-33a | 19/19 | chr22 | + | 11-29 | 37169632-37169710 | 0.999936 | Ortholog | 34/54 | 1/96 |
86 | ponAbe2-523 | Pongo abelii | gga-miR-33 | 20/20 | chr22 | + | 11-30 | 37169632-37169710 | 0.999907 | Ortholog | 34/54 | 1/96 |
87 | taeGut1-139 | Taeniopygia guttata | spu-miR-33 | 21/22 | chr1A | - | 34-55 | 48937642-48937745 | 0.9983 | Ortholog | 34/54 | 1/96 |
88 | taeGut1-139 | Taeniopygia guttata | gga-miR-33 | 20/20 | chr1A | - | 34-53 | 48937642-48937745 | 0.997694 | Ortholog | 34/54 | 1/96 |
89 | taeGut1-139 | Taeniopygia guttata | hsa-miR-33a | 21/21 | chr1A | - | 34-54 | 48937642-48937745 | 0.998444 | Ortholog | 34/54 | 1/96 |
90 | taeGut1-139 | Taeniopygia guttata | gga-miR-33* | 21/22 | chr1A | - | 49-70 | 48937643-48937722 | 0.999974 | Ortholog | 34/54 | 1/96 |
91 | tetNig1-121 | Tetraodon nigroviridis | mml-miR-33a | 18/19 | chr21 | + | 52-70 | 1343117-1343213 | 0.850977 | Ortholog | 34/54 | 3/96 |
92 | tetNig1-141 | Tetraodon nigroviridis | spu-miR-33 | 21/22 | chr3 | - | 14-35 | 8994471-8994555 | 0.999356 | Ortholog | 34/54 | 3/96 |
93 | tetNig1-217 | Tetraodon nigroviridis | gga-miR-33* | 20/22 | chrUn_random | + | 51-72 | 38367039-38367122 | 0.999882 | Ortholog | 34/54 | 3/96 |
94 | tetNig1-217 | Tetraodon nigroviridis | spu-miR-33 | 21/22 | chrUn_random | + | 13-34 | 38367040-38367121 | 0.999954 | Ortholog | 34/54 | 3/96 |
95 | tetNig1-217 | Tetraodon nigroviridis | mml-miR-33a | 19/19 | chrUn_random | + | 12-30 | 38367041-38367120 | 0.999876 | Ortholog | 34/54 | 3/96 |
96 | tetNig1-217 | Tetraodon nigroviridis | gga-miR-33 | 20/20 | chrUn_random | + | 12-31 | 38367041-38367120 | 0.999828 | Ortholog | 34/54 | 3/96 |
97 | tetNig1-217 | Tetraodon nigroviridis | dme-miR-33 | 19/21 | chrUn_random | + | 11-30 | 38367040-38367119 | 0.999782 | Ortholog | 34/54 | 3/96 |
98 | tetNig1-217 | Tetraodon nigroviridis | hsa-miR-33a | 21/21 | chrUn_random | + | 13-33 | 38367040-38367121 | 0.999947 | Ortholog | 34/54 | 3/96 |
99 | tupBel1-107 | Tupaia belangeri | hsa-miR-33a* | 22/22 | scaffold_116384.1-178006 | - | 49-70 | N/A | 0.998281 | Ortholog | 34/54 | 1/96 |
100 | tupBel1-107 | Tupaia belangeri | gga-miR-33 | 20/20 | scaffold_116384.1-178006 | - | 14-33 | N/A | 0.999636 | Ortholog | 34/54 | 1/96 |
101 | tupBel1-107 | Tupaia belangeri | hsa-miR-33a | 21/21 | scaffold_116384.1-178006 | - | 14-34 | N/A | 0.999812 | Ortholog | 34/54 | 1/96 |
102 | tupBel1-107 | Tupaia belangeri | mml-miR-33a | 19/19 | scaffold_116384.1-178006 | - | 13-31 | N/A | 0.999795 | Ortholog | 34/54 | 1/96 |
103 | tupBel1-107 | Tupaia belangeri | spu-miR-33 | 21/22 | scaffold_116384.1-178006 | - | 15-36 | N/A | 0.999843 | Ortholog | 34/54 | 1/96 |
Total | 103 record(s). |