- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-335 | Bos taurus | bta-miR-335 | 23/23 | chr4 | + | 14-36 | N/A | - | miRBase_13_0 | 7/16 | 1/22 |
2 | calJac1-38 | Callithrix jacchus | rno-miR-335 | 23/23 | Contig11707 | - | 17-39 | 16731-16818 | 0.999698 | Ortholog | 7/16 | 1/22 |
3 | calJac1-38 | Callithrix jacchus | mmu-miR-335-3p | 22/22 | Contig11707 | - | 47-68 | 16737-16812 | 0.999585 | Ortholog | 7/16 | 1/22 |
4 | canFam2-57 | Canis familiaris | mmu-miR-335-3p | 20/22 | chr14 | + | 47-68 | 9397203-9397278 | 0.99892 | Paralog | 7/16 | 2/22 |
5 | cfa-mir-335 | Canis familiaris | cfa-miR-335 | 23/23 | chr14 | - | 1-23 | N/A | - | miRBase_13_0 | 7/16 | 2/22 |
6 | cavPor3-66 | Cavia porcellus | rno-miR-335 | 23/23 | scaffold_11 | + | 11-33 | 50759599-50759674 | 0.999596 | Ortholog | 7/16 | 2/22 |
7 | cavPor3-66 | Cavia porcellus | mmu-miR-335-3p | 22/22 | scaffold_11 | + | 47-68 | 50759599-50759674 | 0.999499 | Ortholog | 7/16 | 2/22 |
8 | cavPor3-77 | Cavia porcellus | mmu-miR-335-3p | 20/22 | scaffold_11 | - | 47-68 | 50759598-50759673 | 0.99892 | Ortholog | 7/16 | 2/22 |
9 | equCab1-459 | Equus caballus | mmu-miR-335-3p | 22/22 | chr4 | + | 47-68 | 84388519-84388594 | 0.999585 | Ortholog | 7/16 | 2/22 |
10 | equCab1-459 | Equus caballus | rno-miR-335 | 23/23 | chr4 | + | 11-33 | 84388519-84388594 | 0.999655 | Ortholog | 7/16 | 2/22 |
11 | equCab1-478 | Equus caballus | mmu-miR-335-3p | 20/22 | chr4 | - | 47-68 | 84388518-84388593 | 0.999611 | Ortholog | 7/16 | 2/22 |
12 | eriEur1-146 | Erinaceus europaeus | mmu-miR-335-3p | 22/22 | scaffold_341993 | + | 51-72 | N/A | 0.998757 | Ortholog | 7/16 | 1/22 |
13 | eriEur1-146 | Erinaceus europaeus | rno-miR-335 | 23/23 | scaffold_341993 | + | 14-36 | N/A | 0.999207 | Ortholog | 7/16 | 1/22 |
14 | hsa-mir-335 | Homo sapiens | hsa-miR-335* | 22/22 | chr7 | + | 52-73 | 129923188-129923281 | - | miRBase_13_0 | 7/16 | 1/22 |
15 | hsa-mir-335 | Homo sapiens | hsa-miR-335 | 23/23 | chr7 | + | 16-38 | 129923188-129923281 | - | miRBase_13_0 | 7/16 | 1/22 |
16 | mml-mir-335 | Macaca mulatta | mml-miR-335 | 23/23 | chr3 | + | 10-32 | N/A | - | miRBase_13_0 | 7/16 | 2/22 |
17 | rheMac2-227 | Macaca mulatta | mmu-miR-335-3p | 20/22 | chr3 | - | 47-68 | 167886988-167887063 | 0.999611 | Paralog | 7/16 | 2/22 |
18 | mm9-436 | Mus musculus | mmu-miR-335-3p | 20/22 | chr6 | - | 48-69 | 30691306-30691379 | 0.999561 | Paralog | 7/16 | 2/22 |
19 | mmu-mir-335 | Mus musculus | mmu-miR-335-3p | 22/22 | chr6 | + | 56-77 | N/A | - | miRBase_13_0 | 7/16 | 2/22 |
20 | mmu-mir-335 | Mus musculus | mmu-miR-335-5p | 23/23 | chr6 | + | 16-38 | N/A | - | miRBase_13_0 | 7/16 | 2/22 |
21 | oryCun1-59 | Oryctolagus cuniculus | mmu-miR-335-3p | 22/22 | scaffold_129777 | + | 50-71 | N/A | 0.994094 | Ortholog | 7/16 | 1/22 |
22 | otoGar1-437 | Otolemur garnettii | mmu-miR-335-3p | 22/22 | scaffold_90571.1-24856 | - | 47-68 | N/A | 0.999499 | Ortholog | 7/16 | 1/22 |
23 | otoGar1-437 | Otolemur garnettii | rno-miR-335 | 23/23 | scaffold_90571.1-24856 | - | 11-33 | N/A | 0.999596 | Ortholog | 7/16 | 1/22 |
24 | ptr-mir-335 | Pan troglodytes | ptr-miR-335 | 23/23 | chr7 | + | 15-37 | N/A | - | miRBase_13_0 | 7/16 | 1/22 |
25 | ponAbe2-673 | Pongo abelii | mmu-miR-335-3p | 22/22 | chr7 | + | 47-68 | 127452366-127452441 | 0.999585 | Ortholog | 7/16 | 2/22 |
26 | ponAbe2-673 | Pongo abelii | rno-miR-335 | 23/23 | chr7 | + | 11-33 | 127452366-127452441 | 0.999655 | Ortholog | 7/16 | 2/22 |
27 | ponAbe2-674 | Pongo abelii | rno-miR-335 | 23/23 | chr7 | + | 11-33 | 127454363-127454438 | 0.999655 | Ortholog | 7/16 | 2/22 |
28 | ponAbe2-674 | Pongo abelii | mmu-miR-335-3p | 22/22 | chr7 | + | 47-68 | 127454363-127454438 | 0.999585 | Ortholog | 7/16 | 2/22 |
29 | rno-mir-335 | Rattus norvegicus | rno-miR-335 | 23/23 | N/A | N/A | 16-38 | N/A | - | miRBase_13_0 | 7/16 | 1/22 |
30 | sorAra1-151 | Sorex araneus | mmu-miR-335-3p | 22/22 | scaffold_247596 | + | 51-72 | N/A | 0.999324 | Ortholog | 7/16 | 1/22 |
31 | sorAra1-151 | Sorex araneus | rno-miR-335 | 23/23 | scaffold_247596 | + | 17-39 | N/A | 0.999369 | Ortholog | 7/16 | 1/22 |
32 | tupBel1-189 | Tupaia belangeri | mmu-miR-335-3p | 22/22 | scaffold_120512.1-61810 | - | 47-68 | N/A | 0.96124 | Ortholog | 7/16 | 1/22 |
Total | 32 record(s). |