- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-140 | Callithrix jacchus | rno-miR-338 | 23/23 | Contig1619 | + | 50-72 | 42563-42645 | 0.999342 | Ortholog | 12/22 | 1/36 |
2 | calJac1-140 | Callithrix jacchus | mmu-miR-338-5p | 22/22 | Contig1619 | + | 14-35 | 42563-42645 | 0.998452 | Ortholog | 12/22 | 1/36 |
3 | calJac1-140 | Callithrix jacchus | mmu-miR-338-3p | 22/22 | Contig1619 | + | 51-72 | 42562-42646 | 0.999219 | Ortholog | 12/22 | 1/36 |
4 | cavPor3-717 | Cavia porcellus | mmu-miR-338-3p | 22/22 | scaffold_76 | - | 49-70 | 5706526-5706606 | 0.999783 | Ortholog | 12/22 | 1/36 |
5 | cavPor3-717 | Cavia porcellus | mmu-miR-338-5p | 22/22 | scaffold_76 | - | 15-36 | 5706524-5706608 | 0.99962 | Ortholog | 12/22 | 1/36 |
6 | cavPor3-717 | Cavia porcellus | rno-miR-338 | 23/23 | scaffold_76 | - | 49-71 | 5706526-5706606 | 0.999851 | Ortholog | 12/22 | 1/36 |
7 | equCab1-48 | Equus caballus | mmu-miR-338-5p | 22/22 | chr11 | + | 14-35 | 752730-752812 | 0.999377 | Ortholog | 12/22 | 1/36 |
8 | equCab1-48 | Equus caballus | rno-miR-338 | 23/23 | chr11 | + | 50-72 | 752730-752812 | 0.999755 | Ortholog | 12/22 | 1/36 |
9 | equCab1-48 | Equus caballus | mmu-miR-338-3p | 22/22 | chr11 | + | 51-72 | 752729-752814 | 0.999697 | Ortholog | 12/22 | 1/36 |
10 | eriEur1-178 | Erinaceus europaeus | mmu-miR-338-5p | 21/22 | scaffold_351789 | + | 15-36 | N/A | 0.998951 | Ortholog | 12/22 | 1/36 |
11 | eriEur1-178 | Erinaceus europaeus | mmu-miR-338-3p | 22/22 | scaffold_351789 | + | 51-72 | N/A | 0.999827 | Ortholog | 12/22 | 1/36 |
12 | felCat3-151 | Felis catus | mmu-miR-338-3p | 22/22 | scaffold_152677 | - | 49-70 | 249095-249175 | 0.999742 | Ortholog | 12/22 | 1/36 |
13 | felCat3-151 | Felis catus | mmu-miR-338-5p | 22/22 | scaffold_152677 | - | 19-40 | 249092-249181 | 0.999445 | Ortholog | 12/22 | 1/36 |
14 | felCat3-151 | Felis catus | rno-miR-338 | 23/23 | scaffold_152677 | - | 49-71 | 249095-249175 | 0.999822 | Ortholog | 12/22 | 1/36 |
15 | gasAcu1-288 | Gasterosteus aculeatus | mmu-miR-338-3p | 22/22 | chrUn | - | 49-70 | 25724656-25724752 | 0.920996 | Ortholog | 12/22 | 3/36 |
16 | gasAcu1-300 | Gasterosteus aculeatus | mmu-miR-338-3p | 22/22 | chrV | - | 29-50 | 11295891-11295990 | 0.908372 | Ortholog | 12/22 | 3/36 |
17 | gasAcu1-442 | Gasterosteus aculeatus | mmu-miR-338-3p | 22/22 | chrXI | - | 49-70 | 8720714-8720792 | 0.999785 | Ortholog | 12/22 | 3/36 |
18 | oryLat2-192 | Oryzias latipes | mmu-miR-338-3p | 22/22 | chr19 | - | 49-70 | 2103882-2103958 | 0.999182 | Ortholog | 12/22 | 3/36 |
19 | oryLat2-396 | Oryzias latipes | mmu-miR-338-3p | 22/22 | chr8 | - | 49-70 | 10136034-10136112 | 0.999882 | Ortholog | 12/22 | 3/36 |
20 | oryLat2-456 | Oryzias latipes | mmu-miR-338-3p | 22/22 | ultracontig221 | - | 49-70 | 99763-99841 | 0.999514 | Ortholog | 12/22 | 3/36 |
21 | otoGar1-313 | Otolemur garnettii | rno-miR-338 | 23/23 | scaffold_5103.1-24344 | - | 49-71 | N/A | 0.999968 | Ortholog | 12/22 | 1/36 |
22 | otoGar1-313 | Otolemur garnettii | mmu-miR-338-5p | 22/22 | scaffold_5103.1-24344 | - | 15-36 | N/A | 0.999899 | Ortholog | 12/22 | 1/36 |
23 | otoGar1-313 | Otolemur garnettii | mmu-miR-338-3p | 22/22 | scaffold_5103.1-24344 | - | 49-70 | N/A | 0.999948 | Ortholog | 12/22 | 1/36 |
24 | ponAbe2-312 | Pongo abelii | rno-miR-338 | 23/23 | chr17 | - | 49-71 | 71204197-71204277 | 0.999855 | Ortholog | 12/22 | 1/36 |
25 | ponAbe2-312 | Pongo abelii | mmu-miR-338-3p | 22/22 | chr17 | - | 49-70 | 71204197-71204277 | 0.999834 | Ortholog | 12/22 | 1/36 |
26 | ponAbe2-312 | Pongo abelii | mmu-miR-338-5p | 22/22 | chr17 | - | 15-36 | 71204195-71204279 | 0.999186 | Ortholog | 12/22 | 1/36 |
27 | taeGut1-76 | Taeniopygia guttata | mmu-miR-338-3p | 22/22 | chr14 | - | 49-70 | 14972004-14972083 | 0.999306 | Ortholog | 12/22 | 1/36 |
Total | 27 record(s). |