- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | aga-mir-34 | Anopheles gambiae | aga-miR-34 | 20/20 | chr2R | - | 17-36 | N/A | - | miRBase_13_0 | 45/67 | 2/144 |
2 | ame-mir-34 | Apis mellifera | ame-miR-34 | 22/22 | Group5.13 | + | 21-42 | N/A | - | miRBase_13_0 | 45/67 | 2/144 |
3 | age-mir-34a | Ateles geoffroyi | age-miR-34a | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
4 | bmo-mir-34 | Bombyx mori | bmo-miR-34 | 22/22 | nscaf2823 | - | 21-42 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
5 | bta-mir-34a | Bos taurus | bta-miR-34a | 22/22 | chr16 | + | 22-43 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
6 | bta-mir-34b | Bos taurus | bta-miR-34b | 22/22 | chr15 | + | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
7 | bta-mir-34c | Bos taurus | bta-miR-34c | 22/22 | chr15 | + | 13-34 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
8 | bfl-mir-34 | Branchiostoma floridae | bfl-miR-34 | 25/25 | Bf_V2_269 | - | 21-45 | N/A | - | miRBase_13_0 | 45/67 | 6/144 |
9 | bfl-mir-34b | Branchiostoma floridae | bfl-miR-34b | 22/22 | Bf_V2_38 | - | 54-75 | N/A | - | miRBase_13_0 | 45/67 | 6/144 |
10 | cbr-mir-34 | Caenorhabditis briggsae | cbr-miR-34 | 22/22 | cb25.fpc0045 | + | 18-39 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
11 | cel-mir-34 | Caenorhabditis elegans | cel-miR-34 | 22/22 | chrX | - | 16-37 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
12 | cfa-mir-34a | Canis familiaris | cfa-miR-34a | 22/22 | chr5 | - | 1-22 | N/A | - | miRBase_13_0 | 45/67 | 4/144 |
13 | cfa-mir-34b | Canis familiaris | cfa-miR-34b | 22/22 | chr5 | - | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 4/144 |
14 | cfa-mir-34c | Canis familiaris | cfa-miR-34c | 23/23 | chr5 | - | 1-23 | N/A | - | miRBase_13_0 | 45/67 | 4/144 |
15 | cap-mir-34 | Capitella sp. | cap-miR-34 | 23/23 | scaffold_114 | - | 22-44 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
16 | cin-mir-34 | Ciona intestinalis | cin-miR-34 | 22/22 | chr10q | - | 16-37 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
17 | csa-mir-34 | Ciona savignyi | csa-miR-34 | 22/22 | reftig_0 | + | 16-37 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
18 | dre-mir-34 | Danio rerio | dre-miR-34 | 22/22 | chr23 | + | 19-40 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
19 | dre-mir-34b | Danio rerio | dre-miR-34b | 23/23 | chr5 | - | 13-35 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
20 | dre-mir-34c | Danio rerio | dre-miR-34c | 23/23 | chr5 | - | 16-38 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
21 | dan-mir-34 | Drosophila ananassae | dan-miR-34 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
22 | der-mir-34 | Drosophila erecta | der-miR-34 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
23 | dgr-mir-34 | Drosophila grimshawi | dgr-miR-34 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 2/144 |
24 | dme-mir-34 | Drosophila melanogaster | dme-miR-34 | 24/24 | chr3R | + | 17-40 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
25 | dmo-mir-34 | Drosophila mojavensis | dmo-miR-34 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
26 | dpe-mir-34 | Drosophila persimilis | dpe-miR-34 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
27 | dps-mir-34 | Drosophila pseudoobscura | dps-miR-34 | 22/22 | chr2 | - | 17-38 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
28 | dse-mir-34 | Drosophila sechellia | dse-miR-34 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
29 | dsi-mir-34 | Drosophila simulans | dsi-miR-34 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
30 | dvi-mir-34 | Drosophila virilis | dvi-miR-34 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 2/144 |
31 | dwi-mir-34 | Drosophila willistoni | dwi-miR-34 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
32 | dya-mir-34 | Drosophila yakuba | dya-miR-34 | 22/22 | N/A | N/A | 14-35 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
33 | gga-mir-34a | Gallus gallus | gga-miR-34a | 23/23 | chr21 | - | 21-43 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
34 | gga-mir-34b | Gallus gallus | gga-miR-34b | 23/23 | chr24 | + | 13-35 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
35 | gga-mir-34c | Gallus gallus | gga-miR-34c | 23/23 | chr24 | + | 13-35 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
36 | ggo-mir-34a | Gorilla gorilla | ggo-miR-34a | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
37 | hsa-mir-34a | Homo sapiens | hsa-miR-34a* | 22/22 | chr1 | - | 64-85 | 9134314-9134423 | - | miRBase_13_0 | 45/67 | 3/144 |
38 | hsa-mir-34a | Homo sapiens | hsa-miR-34a | 22/22 | chr1 | - | 22-43 | 9134314-9134423 | - | miRBase_13_0 | 45/67 | 3/144 |
39 | hsa-mir-34b | Homo sapiens | hsa-miR-34b* | 23/23 | chr11 | + | 13-35 | 110888873-110888956 | - | miRBase_13_0 | 45/67 | 3/144 |
40 | hsa-mir-34b | Homo sapiens | hsa-miR-34b | 22/22 | chr11 | + | 50-71 | 110888873-110888956 | - | miRBase_13_0 | 45/67 | 3/144 |
41 | hsa-mir-34c | Homo sapiens | hsa-miR-34c-5p | 23/23 | chr11 | + | 13-35 | 110889374-110889450 | - | miRBase_13_0 | 45/67 | 3/144 |
42 | hsa-mir-34c | Homo sapiens | hsa-miR-34c-3p | 22/22 | chr11 | + | 46-67 | 110889374-110889450 | - | miRBase_13_0 | 45/67 | 3/144 |
43 | lla-mir-34a | Lagothrix lagotricha | lla-miR-34a | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
44 | lgi-mir-34 | Lottia gigantea | lgi-miR-34 | 23/23 | sca_10 | + | 22-44 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
45 | mml-mir-34a | Macaca mulatta | mml-miR-34a | 22/22 | chr1 | - | 22-43 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
46 | mml-mir-34b | Macaca mulatta | mml-miR-34b | 22/22 | chr14 | + | 50-71 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
47 | mml-mir-34c | Macaca mulatta | mml-miR-34c-5p | 23/23 | chr14 | + | 13-35 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
48 | mml-mir-34c | Macaca mulatta | mml-miR-34c-3p | 22/22 | chr14 | + | 46-67 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
49 | mne-mir-34a | Macaca nemestrina | mne-miR-34a | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
50 | mdo-mir-34a | Monodelphis domestica | mdo-miR-34a | 23/23 | chr4 | + | 22-44 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
51 | mmu-mir-34a | Mus musculus | mmu-miR-34a | 22/22 | chr4 | + | 20-41 | N/A | - | miRBase_13_0 | 45/67 | 4/144 |
52 | mmu-mir-34b | Mus musculus | mmu-miR-34b-5p | 23/23 | chr9 | - | 14-36 | N/A | - | miRBase_13_0 | 45/67 | 4/144 |
53 | mmu-mir-34b | Mus musculus | mmu-miR-34b-3p | 22/22 | chr9 | - | 51-72 | N/A | - | miRBase_13_0 | 45/67 | 4/144 |
54 | mmu-mir-34c | Mus musculus | mmu-miR-34c | 23/23 | chr9 | - | 13-35 | N/A | - | miRBase_13_0 | 45/67 | 4/144 |
55 | mmu-mir-34c | Mus musculus | mmu-miR-34c* | 22/22 | chr9 | - | 46-67 | N/A | - | miRBase_13_0 | 45/67 | 4/144 |
56 | oan-mir-34 | Ornithorhynchus anatinus | oan-miR-34 | 23/23 | Contig8579 | - | 21-43 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
57 | oan-mir-34 | Ornithorhynchus anatinus | oan-miR-34* | 22/22 | Contig8579 | - | 54-75 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
58 | ppa-mir-34a | Pan paniscus | ppa-miR-34a | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
59 | ptr-mir-34a | Pan troglodytes | ptr-miR-34a | 22/22 | chr1 | - | 22-43 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
60 | ptr-mir-34b | Pan troglodytes | ptr-miR-34b | 22/22 | chr11 | + | 49-70 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
61 | ptr-mir-34c | Pan troglodytes | ptr-miR-34c | 22/22 | chr11 | + | 45-66 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
62 | ppy-mir-34a | Pongo pygmaeus | ppy-miR-34a | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
63 | rno-mir-34a | Rattus norvegicus | rno-miR-34a | 22/22 | chr5 | + | 20-41 | N/A | - | miRBase_13_0 | 45/67 | 6/144 |
64 | rno-mir-34b | Rattus norvegicus | rno-miR-34b | 23/23 | chr8 | - | 13-35 | N/A | - | miRBase_13_0 | 45/67 | 6/144 |
65 | rno-mir-34c | Rattus norvegicus | rno-miR-34c | 23/23 | chr8 | - | 13-35 | N/A | - | miRBase_13_0 | 45/67 | 6/144 |
66 | rno-mir-34c | Rattus norvegicus | rno-miR-34c* | 22/22 | chr8 | - | 46-67 | N/A | - | miRBase_13_0 | 45/67 | 6/144 |
67 | sko-mir-34 | Saccoglossus kowalevskii | sko-miR-34 | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
68 | sla-mir-34a | Saguinus labiatus | sla-miR-34a | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
69 | spu-mir-34 | Strongylocentrotus purpuratus | spu-miR-34 | 22/22 | N/A | N/A | 21-42 | N/A | - | miRBase_13_0 | 45/67 | 2/144 |
70 | ssc-mir-34a | Sus scrofa | ssc-miR-34a | 22/22 | N/A | N/A | 7-28 | N/A | - | miRBase_13_0 | 45/67 | 1/144 |
71 | tca-mir-34 | Tribolium castaneum | tca-miR-34 | 22/22 | CM000282.1 | - | 11-32 | N/A | - | miRBase_13_0 | 45/67 | 2/144 |
72 | xtr-mir-34a | Xenopus tropicalis | xtr-miR-34a | 23/23 | scaffold_207 | + | 16-38 | N/A | - | miRBase_13_0 | 45/67 | 5/144 |
73 | xtr-mir-34b-1 | Xenopus tropicalis | xtr-miR-34b | 23/23 | scaffold_1127 | - | 12-34 | N/A | - | miRBase_13_0 | 45/67 | 5/144 |
74 | xtr-mir-34b-2 | Xenopus tropicalis | xtr-miR-34b | 23/23 | scaffold_1127 | + | 3-25 | N/A | - | miRBase_13_0 | 45/67 | 5/144 |
75 | xtr-mir-34b-3 | Xenopus tropicalis | xtr-miR-34b | 23/23 | scaffold_39 | - | 12-34 | N/A | - | miRBase_13_0 | 45/67 | 5/144 |
76 | xtr-mir-34b-4 | Xenopus tropicalis | xtr-miR-34b | 23/23 | scaffold_39 | + | 3-25 | N/A | - | miRBase_13_0 | 45/67 | 5/144 |
Total | 76 record(s). |