- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoGam1-127 | Anopheles gambiae | dme-miR-34 | 24/24 | chr2R | - | 13-36 | 28232665-28232749 | 0.996053 | Paralog | 45/67 | 2/144 |
2 | anoGam1-127 | Anopheles gambiae | ame-miR-34 | 21/22 | chr2R | - | 11-32 | 28232666-28232747 | 0.995033 | Paralog | 45/67 | 2/144 |
3 | anoGam1-127 | Anopheles gambiae | aga-miR-34 | 20/20 | chr2R | - | 10-29 | 28232667-28232746 | 0.996541 | Paralog | 45/67 | 2/144 |
4 | anoGam1-127 | Anopheles gambiae | lgi-miR-34 | 22/23 | chr2R | - | 11-33 | 28232666-28232747 | 0.997269 | Paralog | 45/67 | 2/144 |
5 | anoGam1-127 | Anopheles gambiae | spu-miR-34 | 20/22 | chr2R | - | 12-32 | 28232666-28232747 | 0.993243 | Paralog | 45/67 | 2/144 |
6 | apiMel2-67 | Apis mellifera | ame-miR-34 | 22/22 | Group5 | + | 9-30 | 6546370-6546447 | 0.990088 | Paralog | 45/67 | 2/144 |
7 | apiMel2-67 | Apis mellifera | aga-miR-34 | 19/20 | Group5 | + | 8-27 | 6546371-6546446 | 0.993627 | Paralog | 45/67 | 2/144 |
8 | apiMel2-67 | Apis mellifera | lgi-miR-34 | 21/23 | Group5 | + | 10-32 | 6546369-6546448 | 0.992909 | Paralog | 45/67 | 2/144 |
9 | apiMel2-67 | Apis mellifera | spu-miR-34 | 20/22 | Group5 | + | 11-31 | 6546369-6546448 | 0.987722 | Paralog | 45/67 | 2/144 |
10 | apiMel2-67 | Apis mellifera | dme-miR-34 | 23/24 | Group5 | + | 10-33 | 6546369-6546448 | 0.988766 | Paralog | 45/67 | 2/144 |
11 | braFlo1-155 | Branchiostoma floridae | bfl-miR-34 | 25/25 | chrUn | - | 21-45 | 539320795-539320887 | 0.979332 | Paralog | 45/67 | 6/144 |
12 | braFlo1-155 | Branchiostoma floridae | aga-miR-34 | 18/20 | chrUn | - | 18-36 | 539320798-539320885 | 0.961888 | Paralog | 45/67 | 6/144 |
13 | braFlo1-157 | Branchiostoma floridae | aga-miR-34 | 18/20 | chrUn | - | 11-29 | 539321550-539321629 | 0.999577 | Paralog | 45/67 | 6/144 |
14 | braFlo1-53 | Branchiostoma floridae | aga-miR-34 | 18/20 | chrUn | + | 10-28 | 660094244-660094321 | 0.999806 | Paralog | 45/67 | 6/144 |
15 | braFlo1-54 | Branchiostoma floridae | aga-miR-34 | 18/20 | chrUn | + | 14-32 | 660094992-660095072 | 0.961888 | Paralog | 45/67 | 6/144 |
16 | braFlo1-54 | Branchiostoma floridae | bfl-miR-34 | 25/25 | chrUn | + | 20-44 | 660094986-660095076 | 0.978919 | Paralog | 45/67 | 6/144 |
17 | cb3-28 | Caenorhabditis briggsae | aga-miR-34 | 18/20 | chrIII | - | 39-57 | 3442860-3442967 | 0.950146 | Paralog | 45/67 | 3/144 |
18 | cb3-59 | Caenorhabditis briggsae | spu-miR-34 | 20/22 | chrX | + | 14-34 | 3899340-3899422 | 0.996725 | Paralog | 45/67 | 3/144 |
19 | cb3-59 | Caenorhabditis briggsae | cin-miR-34 | 20/22 | chrX | + | 12-33 | 3899341-3899421 | 0.998955 | Paralog | 45/67 | 3/144 |
20 | cb3-59 | Caenorhabditis briggsae | aga-miR-34 | 19/20 | chrX | + | 13-31 | 3899341-3899421 | 0.998134 | Paralog | 45/67 | 3/144 |
21 | canFam2-145 | Canis familiaris | cin-miR-34 | 20/22 | chr24 | - | 49-70 | 44879321-44879418 | 0.875885 | Paralog | 45/67 | 4/144 |
22 | droGri2-6 | Drosophila grimshawi | dme-miR-34 | 24/24 | scaffold_14624 | + | 8-31 | N/A | 0.996152 | Paralog | 45/67 | 2/144 |
23 | droGri2-6 | Drosophila grimshawi | ame-miR-34 | 21/22 | scaffold_14624 | + | 10-31 | N/A | 0.997773 | Paralog | 45/67 | 2/144 |
24 | droGri2-6 | Drosophila grimshawi | aga-miR-34 | 20/20 | scaffold_14624 | + | 10-29 | N/A | 0.99727 | Paralog | 45/67 | 2/144 |
25 | droGri2-6 | Drosophila grimshawi | lgi-miR-34 | 22/23 | scaffold_14624 | + | 8-30 | N/A | 0.997398 | Paralog | 45/67 | 2/144 |
26 | droGri2-6 | Drosophila grimshawi | spu-miR-34 | 20/22 | scaffold_14624 | + | 9-29 | N/A | 0.993403 | Paralog | 45/67 | 2/144 |
27 | droMoj3-183 | Drosophila mojavensis | spu-miR-34 | 20/22 | scaffold_6540 | - | 11-31 | N/A | 0.992401 | Paralog | 45/67 | 3/144 |
28 | droMoj3-183 | Drosophila mojavensis | aga-miR-34 | 20/20 | scaffold_6540 | - | 8-27 | N/A | 0.990491 | Paralog | 45/67 | 3/144 |
29 | droMoj3-183 | Drosophila mojavensis | dme-miR-34 | 24/24 | scaffold_6540 | - | 11-34 | N/A | 0.991695 | Paralog | 45/67 | 3/144 |
30 | droMoj3-183 | Drosophila mojavensis | lgi-miR-34 | 22/23 | scaffold_6540 | - | 10-32 | N/A | 0.99704 | Paralog | 45/67 | 3/144 |
31 | droMoj3-183 | Drosophila mojavensis | ame-miR-34 | 21/22 | scaffold_6540 | - | 10-31 | N/A | 0.994772 | Paralog | 45/67 | 3/144 |
32 | droMoj3-64 | Drosophila mojavensis | aga-miR-34 | 18/20 | scaffold_6496 | + | 23-40 | N/A | 0.952145 | Paralog | 45/67 | 3/144 |
33 | droVir3-36 | Drosophila virilis | aga-miR-34 | 20/20 | scaffold_12855 | - | 8-27 | N/A | 0.990896 | Paralog | 45/67 | 2/144 |
34 | droVir3-36 | Drosophila virilis | spu-miR-34 | 20/22 | scaffold_12855 | - | 11-31 | N/A | 0.992724 | Paralog | 45/67 | 2/144 |
35 | droVir3-36 | Drosophila virilis | lgi-miR-34 | 22/23 | scaffold_12855 | - | 10-32 | N/A | 0.997162 | Paralog | 45/67 | 2/144 |
36 | droVir3-36 | Drosophila virilis | dme-miR-34 | 24/24 | scaffold_12855 | - | 11-34 | N/A | 0.992047 | Paralog | 45/67 | 2/144 |
37 | droVir3-36 | Drosophila virilis | ame-miR-34 | 21/22 | scaffold_12855 | - | 10-31 | N/A | 0.994987 | Paralog | 45/67 | 2/144 |
38 | monDom4-327 | Monodelphis domestica | mmu-miR-34c | 23/23 | chr4 | - | 17-39 | 241888495-241888581 | 0.986623 | Paralog | 45/67 | 3/144 |
39 | monDom4-327 | Monodelphis domestica | spu-miR-34 | 20/22 | chr4 | - | 18-38 | 241888495-241888581 | 0.98735 | Paralog | 45/67 | 3/144 |
40 | monDom4-327 | Monodelphis domestica | bta-miR-34c | 22/22 | chr4 | - | 17-38 | 241888495-241888581 | 0.992154 | Paralog | 45/67 | 3/144 |
41 | monDom4-328 | Monodelphis domestica | mmu-miR-34b-3p | 22/22 | chr4 | - | 49-70 | 241889187-241889266 | 0.998271 | Paralog | 45/67 | 3/144 |
42 | monDom4-328 | Monodelphis domestica | hsa-miR-34b | 22/22 | chr4 | - | 49-70 | 241889186-241889267 | 0.998183 | Paralog | 45/67 | 3/144 |
43 | monDom4-328 | Monodelphis domestica | bta-miR-34c | 22/22 | chr4 | - | 14-35 | 241889185-241889268 | 0.998015 | Paralog | 45/67 | 3/144 |
44 | monDom4-328 | Monodelphis domestica | spu-miR-34 | 20/22 | chr4 | - | 15-35 | 241889185-241889268 | 0.998222 | Paralog | 45/67 | 3/144 |
45 | mm9-248 | Mus musculus | mmu-miR-34a | 20/22 | chr17 | - | 49-70 | 83345451-83345541 | 0.92439 | Paralog | 45/67 | 4/144 |
46 | ornAna1-146 | Ornithorhynchus anatinus | mmu-miR-34b-3p | 22/22 | Contig8579 | - | 49-70 | 9803-9882 | 0.995782 | Paralog | 45/67 | 3/144 |
47 | ornAna1-146 | Ornithorhynchus anatinus | hsa-miR-34b | 22/22 | Contig8579 | - | 49-70 | 9802-9883 | 0.994976 | Paralog | 45/67 | 3/144 |
48 | ornAna1-221 | Ornithorhynchus anatinus | aga-miR-34 | 19/20 | Ultra514 | + | 6-25 | 11354785-11354858 | 0.962323 | Paralog | 45/67 | 3/144 |
49 | rn4-103 | Rattus norvegicus | ame-miR-34 | 20/22 | chr14 | + | 44-65 | 61413775-61413847 | 0.891879 | Paralog | 45/67 | 6/144 |
50 | rn4-230 | Rattus norvegicus | lgi-miR-34 | 21/23 | chr4 | + | 50-72 | 159124307-159124389 | 0.913723 | Paralog | 45/67 | 6/144 |
51 | rn4-266 | Rattus norvegicus | aga-miR-34 | 18/20 | chr6 | + | 16-33 | 40843431-40843513 | 0.971546 | Paralog | 45/67 | 6/144 |
52 | strPur2-37 | Strongylocentrotus purpuratus | aga-miR-34 | 18/20 | Scaffold34693 | + | 14-32 | 951596-951677 | 0.99964 | Paralog | 45/67 | 2/144 |
53 | strPur2-37 | Strongylocentrotus purpuratus | cin-miR-34 | 20/22 | Scaffold34693 | + | 15-35 | 951595-951678 | 0.999485 | Paralog | 45/67 | 2/144 |
54 | strPur2-37 | Strongylocentrotus purpuratus | cap-miR-34 | 21/23 | Scaffold34693 | + | 15-36 | 951595-951678 | 0.999714 | Paralog | 45/67 | 2/144 |
55 | strPur2-37 | Strongylocentrotus purpuratus | spu-miR-34 | 22/22 | Scaffold34693 | + | 13-34 | 951596-951677 | 0.999494 | Paralog | 45/67 | 2/144 |
56 | triCas2-75 | Tribolium castaneum | dme-miR-34 | 24/24 | ChLG7 | - | 16-39 | N/A | 0.986068 | Paralog | 45/67 | 2/144 |
57 | triCas2-75 | Tribolium castaneum | spu-miR-34 | 20/22 | ChLG7 | - | 17-37 | N/A | 0.980036 | Paralog | 45/67 | 2/144 |
58 | triCas2-75 | Tribolium castaneum | lgi-miR-34 | 22/23 | ChLG7 | - | 16-38 | N/A | 0.992098 | Paralog | 45/67 | 2/144 |
59 | triCas2-75 | Tribolium castaneum | aga-miR-34 | 20/20 | ChLG7 | - | 15-34 | N/A | 0.988526 | Paralog | 45/67 | 2/144 |
60 | triCas2-75 | Tribolium castaneum | ame-miR-34 | 21/22 | ChLG7 | - | 16-37 | N/A | 0.985437 | Paralog | 45/67 | 2/144 |
Total | 60 record(s). |