- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
| Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | bta-mir-340 | Bos taurus | bta-miR-340 | 23/23 | chr7 | + | 58-80 | N/A | - | miRBase_13_0 | 8/11 | 1/15 |
| 2 | cfa-mir-340 | Canis familiaris | cfa-miR-340 | 22/22 | chr11 | + | 16-37 | N/A | - | miRBase_13_0 | 8/11 | 1/15 |
| 3 | equCab1-104 | Equus caballus | mmu-miR-340-3p | 22/22 | chr14 | + | 51-72 | 1764336-1764415 | 0.98686 | Ortholog | 8/11 | 2/15 |
| 4 | equCab1-104 | Equus caballus | rno-miR-340-3p | 23/23 | chr14 | + | 50-72 | 1764337-1764413 | 0.968874 | Ortholog | 8/11 | 2/15 |
| 5 | equCab1-104 | Equus caballus | rno-miR-340-5p | 22/22 | chr14 | + | 8-29 | 1764337-1764413 | 0.993417 | Ortholog | 8/11 | 2/15 |
| 6 | equCab1-234 | Equus caballus | rno-miR-340-5p | 20/22 | chr2 | + | 9-29 | 85362677-85362754 | 0.922839 | Ortholog | 8/11 | 2/15 |
| 7 | felCat3-211 | Felis catus | rno-miR-340-5p | 20/22 | scaffold_170606 | + | 10-30 | 2480-2558 | 0.995243 | Ortholog | 8/11 | 1/15 |
| 8 | hsa-mir-340 | Homo sapiens | hsa-miR-340* | 22/22 | chr5 | - | 58-79 | 179374909-179375003 | - | miRBase_13_0 | 8/11 | 1/15 |
| 9 | hsa-mir-340 | Homo sapiens | hsa-miR-340 | 22/22 | chr5 | - | 16-37 | 179374909-179375003 | - | miRBase_13_0 | 8/11 | 1/15 |
| 10 | mml-mir-340 | Macaca mulatta | mml-miR-340 | 22/22 | chr6 | - | 16-37 | N/A | - | miRBase_13_0 | 8/11 | 1/15 |
| 11 | mdo-mir-340 | Monodelphis domestica | mdo-miR-340 | 22/22 | chr1 | + | 27-48 | N/A | - | miRBase_13_0 | 8/11 | 4/15 |
| 12 | monDom4-2 | Monodelphis domestica | mdo-miR-340 | 22/22 | chr1 | + | 18-39 | 72641003-72641089 | 0.999977 | Paralog | 8/11 | 4/15 |
| 13 | monDom4-300 | Monodelphis domestica | rno-miR-340-5p | 20/22 | chr4 | + | 12-32 | 285427902-285427982 | 0.984239 | Paralog | 8/11 | 4/15 |
| 14 | monDom4-314 | Monodelphis domestica | rno-miR-340-5p | 21/22 | chr4 | + | 15-36 | 417830333-417830416 | 0.900584 | Paralog | 8/11 | 4/15 |
| 15 | mmu-mir-340 | Mus musculus | mmu-miR-340-3p | 22/22 | chr11 | + | 61-82 | N/A | - | miRBase_13_0 | 8/11 | 1/15 |
| 16 | mmu-mir-340 | Mus musculus | mmu-miR-340-5p | 22/22 | chr11 | + | 19-40 | N/A | - | miRBase_13_0 | 8/11 | 1/15 |
| 17 | otoGar1-505 | Otolemur garnettii | rno-miR-340-5p | 21/22 | scaffold_99942.1-306169 | + | 8-29 | N/A | 0.999481 | Ortholog | 8/11 | 1/15 |
| 18 | ptr-mir-340 | Pan troglodytes | ptr-miR-340 | 22/22 | chr5 | - | 16-37 | N/A | - | miRBase_13_0 | 8/11 | 1/15 |
| 19 | rno-mir-340 | Rattus norvegicus | rno-miR-340-5p | 22/22 | N/A | N/A | 19-40 | N/A | - | miRBase_13_0 | 8/11 | 1/15 |
| 20 | rno-mir-340 | Rattus norvegicus | rno-miR-340-3p | 23/23 | N/A | N/A | 61-83 | N/A | - | miRBase_13_0 | 8/11 | 1/15 |
| Total | 20 record(s). | |||||||||||