- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-345 | Bos taurus | bta-miR-345 | 21/21 | chr21 | + | 17-37 | N/A | - | miRBase_13_0 | 7/14 | 1/17 |
2 | canFam2-101 | Canis familiaris | bta-miR-345 | 19/21 | chr18 | - | 50-69 | 46859846-46859921 | 0.955959 | Paralog | 7/14 | 2/17 |
3 | cfa-mir-345 | Canis familiaris | cfa-miR-345 | 21/21 | chr8 | + | 40-60 | N/A | - | miRBase_13_0 | 7/14 | 2/17 |
4 | cavPor3-78 | Cavia porcellus | cfa-miR-345 | 21/21 | scaffold_111 | + | 17-37 | 6135-6210 | 0.998972 | Ortholog | 7/14 | 1/17 |
5 | cavPor3-78 | Cavia porcellus | mmu-miR-345-3p | 20/22 | scaffold_111 | + | 17-36 | 6134-6209 | 0.999314 | Ortholog | 7/14 | 1/17 |
6 | echTel1-166 | Echinops telfari | cfa-miR-345 | 21/21 | scaffold_283332 | + | 51-71 | N/A | 0.993593 | Ortholog | 7/14 | 1/17 |
7 | echTel1-166 | Echinops telfari | rno-miR-345-3p | 21/22 | scaffold_283332 | + | 51-71 | N/A | 0.996817 | Ortholog | 7/14 | 1/17 |
8 | echTel1-166 | Echinops telfari | mmu-miR-345-3p | 20/22 | scaffold_283332 | + | 52-71 | N/A | 0.998127 | Ortholog | 7/14 | 1/17 |
9 | echTel1-166 | Echinops telfari | rno-miR-345-5p | 20/21 | scaffold_283332 | + | 13-33 | N/A | 0.999205 | Ortholog | 7/14 | 1/17 |
10 | echTel1-166 | Echinops telfari | hsa-miR-345 | 21/22 | scaffold_283332 | + | 14-35 | N/A | 0.998336 | Ortholog | 7/14 | 1/17 |
11 | echTel1-166 | Echinops telfari | bta-miR-345 | 21/21 | scaffold_283332 | + | 14-34 | N/A | 0.999205 | Ortholog | 7/14 | 1/17 |
12 | equCab1-512 | Equus caballus | hsa-miR-345 | 20/22 | chr6 | + | 51-71 | 26537426-26537500 | 0.845434 | Ortholog | 7/14 | 1/17 |
13 | felCat3-37 | Felis catus | hsa-miR-345 | 20/22 | scaffold_133417 | - | 39-59 | 330325-330433 | 0.818556 | Ortholog | 7/14 | 1/17 |
14 | hsa-mir-345 | Homo sapiens | hsa-miR-345 | 22/22 | chr14 | + | 18-39 | 99843949-99844046 | - | miRBase_13_0 | 7/14 | 1/17 |
15 | loxAfr1-6 | Loxodonta africana | cfa-miR-345 | 20/21 | scaffold_10324 | + | 18-38 | N/A | 0.983592 | Ortholog | 7/14 | 1/17 |
16 | loxAfr1-6 | Loxodonta africana | rno-miR-345-3p | 20/22 | scaffold_10324 | + | 17-37 | N/A | 0.908627 | Ortholog | 7/14 | 1/17 |
17 | mml-mir-345 | Macaca mulatta | mml-miR-345 | 22/22 | chr7 | + | 14-35 | N/A | - | miRBase_13_0 | 7/14 | 3/17 |
18 | rheMac2-26 | Macaca mulatta | mmu-miR-345-5p | 21/22 | chr1 | - | 6-27 | 150460106-150460182 | 0.846357 | Paralog | 7/14 | 3/17 |
19 | rheMac2-75 | Macaca mulatta | bta-miR-345 | 19/21 | chr13 | + | 51-70 | 66851000-66851091 | 0.991336 | Paralog | 7/14 | 3/17 |
20 | mmu-mir-345 | Mus musculus | mmu-miR-345-5p | 22/22 | chr12 | + | 17-38 | N/A | - | miRBase_13_0 | 7/14 | 1/17 |
21 | mmu-mir-345 | Mus musculus | mmu-miR-345-3p | 22/22 | chr12 | + | 55-76 | N/A | - | miRBase_13_0 | 7/14 | 1/17 |
22 | ptr-mir-345 | Pan troglodytes | ptr-miR-345 | 22/22 | chr14 | + | 17-38 | N/A | - | miRBase_13_0 | 7/14 | 1/17 |
23 | ponAbe2-182 | Pongo abelii | cfa-miR-345 | 20/21 | chr14 | + | 10-30 | 101827895-101827973 | 0.962471 | Ortholog | 7/14 | 1/17 |
24 | ponAbe2-182 | Pongo abelii | rno-miR-345-3p | 20/22 | chr14 | + | 9-29 | 101827895-101827972 | 0.903196 | Ortholog | 7/14 | 1/17 |
25 | rno-mir-345 | Rattus norvegicus | rno-miR-345-3p | 22/22 | chr6 | + | 54-75 | N/A | - | miRBase_13_0 | 7/14 | 1/17 |
26 | rno-mir-345 | Rattus norvegicus | rno-miR-345-5p | 21/21 | chr6 | + | 16-36 | N/A | - | miRBase_13_0 | 7/14 | 1/17 |
27 | sorAra1-253 | Sorex araneus | bta-miR-345 | 20/21 | scaffold_77351 | + | 14-34 | N/A | 0.999435 | Ortholog | 7/14 | 1/17 |
Total | 27 record(s). |