- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-199 | Anolis carolinensis | mdo-miR-375 | 21/23 | scaffold_312 | + | 50-70 | 1503972-1504055 | 0.99176 | Ortholog | 21/44 | 1/50 |
2 | anoCar1-199 | Anolis carolinensis | hsa-miR-375 | 20/22 | scaffold_312 | + | 51-70 | 1503972-1504055 | 0.987509 | Ortholog | 21/44 | 1/50 |
3 | aga-mir-375 | Anopheles gambiae | aga-miR-375 | 22/22 | UNKN | - | 67-88 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
4 | ame-mir-375 | Apis mellifera | ame-miR-375 | 22/22 | Group3.18 | - | 63-84 | N/A | - | miRBase_13_0 | 21/44 | 2/50 |
5 | apiMel2-57 | Apis mellifera | cap-miR-375 | 20/22 | Group3 | + | 51-72 | 7744789-7744871 | 0.994015 | Paralog | 21/44 | 2/50 |
6 | apiMel2-57 | Apis mellifera | bfl-miR-375 | 21/23 | Group3 | + | 51-72 | 7744791-7744868 | 0.984404 | Paralog | 21/44 | 2/50 |
7 | bta-mir-375 | Bos taurus | bta-miR-375 | 23/23 | chr2 | - | 39-61 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
8 | bfl-mir-375 | Branchiostoma floridae | bfl-miR-375 | 23/23 | Bf_V2_285 | - | 63-85 | N/A | - | miRBase_13_0 | 21/44 | 2/50 |
9 | braFlo1-124 | Branchiostoma floridae | cap-miR-375 | 21/22 | chrUn | - | 49-70 | 316159735-316159810 | 0.995104 | Paralog | 21/44 | 2/50 |
10 | braFlo1-124 | Branchiostoma floridae | hsa-miR-375 | 20/22 | chrUn | - | 50-69 | 316159734-316159811 | 0.992826 | Paralog | 21/44 | 2/50 |
11 | braFlo1-124 | Branchiostoma floridae | mdo-miR-375 | 21/23 | chrUn | - | 50-70 | 316159733-316159812 | 0.995588 | Paralog | 21/44 | 2/50 |
12 | calJac1-477 | Callithrix jacchus | sko-miR-375 | 21/22 | Contig460 | + | 49-70 | 729421-729501 | 0.999576 | Ortholog | 21/44 | 1/50 |
13 | calJac1-477 | Callithrix jacchus | mdo-miR-375 | 23/23 | Contig460 | + | 48-70 | 729421-729501 | 0.999696 | Ortholog | 21/44 | 1/50 |
14 | calJac1-477 | Callithrix jacchus | dre-miR-375 | 20/22 | Contig460 | + | 49-68 | 729421-729501 | 0.999211 | Ortholog | 21/44 | 1/50 |
15 | cfa-mir-375 | Canis familiaris | cfa-miR-375 | 22/22 | chr37 | - | 41-62 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
16 | cap-mir-375 | Capitella sp. | cap-miR-375 | 22/22 | scaffold_28 | - | 61-82 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
17 | cavPor3-763 | Cavia porcellus | sko-miR-375 | 21/22 | scaffold_89 | + | 49-70 | 6176376-6176456 | 0.999376 | Ortholog | 21/44 | 1/50 |
18 | cavPor3-763 | Cavia porcellus | dre-miR-375 | 20/22 | scaffold_89 | + | 49-68 | 6176376-6176456 | 0.998846 | Ortholog | 21/44 | 1/50 |
19 | cavPor3-763 | Cavia porcellus | mdo-miR-375 | 23/23 | scaffold_89 | + | 48-70 | 6176376-6176456 | 0.999562 | Ortholog | 21/44 | 1/50 |
20 | dre-mir-375-1 | Danio rerio | dre-miR-375 | 22/22 | chr6 | + | 49-70 | N/A | - | miRBase_13_0 | 21/44 | 2/50 |
21 | dre-mir-375-2 | Danio rerio | dre-miR-375 | 22/22 | chr9 | + | 52-73 | N/A | - | miRBase_13_0 | 21/44 | 2/50 |
22 | dasNov1-260 | Dasypus novemcinctus | dre-miR-375 | 20/22 | scaffold_48131 | - | 49-68 | N/A | 0.999211 | Ortholog | 21/44 | 1/50 |
23 | dasNov1-260 | Dasypus novemcinctus | mdo-miR-375 | 23/23 | scaffold_48131 | - | 48-70 | N/A | 0.999696 | Ortholog | 21/44 | 1/50 |
24 | dasNov1-260 | Dasypus novemcinctus | sko-miR-375 | 21/22 | scaffold_48131 | - | 49-70 | N/A | 0.999576 | Ortholog | 21/44 | 1/50 |
25 | droAna3-7 | Drosophila ananassae | aga-miR-375 | 20/22 | scaffold_12916 | + | 51-72 | N/A | 0.964604 | Ortholog | 21/44 | 1/50 |
26 | droEre2-123 | Drosophila erecta | aga-miR-375 | 20/22 | scaffold_4929 | + | 51-72 | 914710-914792 | 0.989183 | Ortholog | 21/44 | 1/50 |
27 | dme-mir-375 | Drosophila melanogaster | dme-miR-375 | 22/22 | chr2L | + | 55-76 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
28 | droMoj3-146 | Drosophila mojavensis | aga-miR-375 | 20/22 | scaffold_6500 | - | 49-70 | N/A | 0.973015 | Ortholog | 21/44 | 1/50 |
29 | droSec1-68 | Drosophila sechellia | aga-miR-375 | 20/22 | super_14 | + | 51-72 | 828179-828259 | 0.985704 | Ortholog | 21/44 | 1/50 |
30 | droSim1-24 | Drosophila simulans | aga-miR-375 | 20/22 | chr2L_random | + | 51-72 | 38986-39066 | 0.985704 | Ortholog | 21/44 | 1/50 |
31 | droVir3-112 | Drosophila virilis | aga-miR-375 | 20/22 | scaffold_12963 | + | 51-72 | N/A | 0.971715 | Ortholog | 21/44 | 1/50 |
32 | droYak2-1 | Drosophila yakuba | aga-miR-375 | 20/22 | chr2L | + | 51-72 | 841569-841651 | 0.989183 | Ortholog | 21/44 | 1/50 |
33 | equCab1-526 | Equus caballus | dre-miR-375 | 20/22 | chr6 | - | 49-68 | 8575996-8576076 | 0.999211 | Ortholog | 21/44 | 1/50 |
34 | equCab1-526 | Equus caballus | sko-miR-375 | 21/22 | chr6 | - | 49-70 | 8575996-8576076 | 0.999576 | Ortholog | 21/44 | 1/50 |
35 | equCab1-526 | Equus caballus | mdo-miR-375 | 23/23 | chr6 | - | 48-70 | 8575996-8576076 | 0.999696 | Ortholog | 21/44 | 1/50 |
36 | eriEur1-7 | Erinaceus europaeus | dre-miR-375 | 20/22 | scaffold_109553 | - | 49-68 | N/A | 0.999211 | Ortholog | 21/44 | 1/50 |
37 | eriEur1-7 | Erinaceus europaeus | sko-miR-375 | 21/22 | scaffold_109553 | - | 49-70 | N/A | 0.999576 | Ortholog | 21/44 | 1/50 |
38 | eriEur1-7 | Erinaceus europaeus | mdo-miR-375 | 23/23 | scaffold_109553 | - | 48-70 | N/A | 0.999696 | Ortholog | 21/44 | 1/50 |
39 | felCat3-185 | Felis catus | mdo-miR-375 | 23/23 | scaffold_162921 | - | 49-71 | 84477-84585 | 0.845282 | Ortholog | 21/44 | 1/50 |
40 | fr2-159 | Fugu rubripes | bfl-miR-375 | 21/23 | chrUn | + | 51-71 | 369104420-369104499 | 0.886694 | Paralog | 21/44 | 3/50 |
41 | fr2-159 | Fugu rubripes | cap-miR-375 | 21/22 | chrUn | + | 51-72 | 369104418-369104501 | 0.862948 | Paralog | 21/44 | 3/50 |
42 | fr2-78 | Fugu rubripes | cap-miR-375 | 21/22 | chrUn | + | 51-72 | 155214073-155214156 | 0.862948 | Paralog | 21/44 | 3/50 |
43 | fr2-78 | Fugu rubripes | bfl-miR-375 | 21/23 | chrUn | + | 51-71 | 155214075-155214154 | 0.886694 | Paralog | 21/44 | 3/50 |
44 | fru-mir-375 | Fugu rubripes | fru-miR-375 | 22/22 | scaffold_83 | + | 49-70 | N/A | - | miRBase_13_0 | 21/44 | 3/50 |
45 | gga-mir-375 | Gallus gallus | gga-miR-375 | 22/22 | chr7 | + | 41-62 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
46 | gasAcu1-618 | Gasterosteus aculeatus | cap-miR-375 | 21/22 | chrXVI | - | 49-70 | 14986886-14986965 | 0.898608 | Ortholog | 21/44 | 1/50 |
47 | hsa-mir-375 | Homo sapiens | hsa-miR-375 | 22/22 | chr2 | - | 40-61 | 219574611-219574674 | - | miRBase_13_0 | 21/44 | 1/50 |
48 | lgi-mir-375 | Lottia gigantea | lgi-miR-375 | 22/22 | sca_118 | + | 61-82 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
49 | mml-mir-375 | Macaca mulatta | mml-miR-375 | 22/22 | chr12 | - | 40-61 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
50 | mdo-mir-375 | Monodelphis domestica | mdo-miR-375 | 23/23 | chr7 | + | 38-60 | N/A | - | miRBase_13_0 | 21/44 | 2/50 |
51 | monDom4-402 | Monodelphis domestica | dre-miR-375 | 20/22 | chr7 | + | 51-70 | 175492639-175492725 | 0.999188 | Paralog | 21/44 | 2/50 |
52 | monDom4-402 | Monodelphis domestica | sko-miR-375 | 21/22 | chr7 | + | 51-72 | 175492639-175492725 | 0.999567 | Paralog | 21/44 | 2/50 |
53 | monDom4-402 | Monodelphis domestica | mdo-miR-375 | 23/23 | chr7 | + | 50-72 | 175492639-175492725 | 0.999687 | Paralog | 21/44 | 2/50 |
54 | mmu-mir-375 | Mus musculus | mmu-miR-375 | 22/22 | chr1 | - | 40-61 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
55 | oryCun1-417 | Oryctolagus cuniculus | dre-miR-375 | 20/22 | scaffold_207890 | - | 16-35 | N/A | 0.998982 | Ortholog | 21/44 | 1/50 |
56 | oryCun1-417 | Oryctolagus cuniculus | mdo-miR-375 | 23/23 | scaffold_207890 | - | 15-37 | N/A | 0.999562 | Ortholog | 21/44 | 1/50 |
57 | oryCun1-417 | Oryctolagus cuniculus | sko-miR-375 | 21/22 | scaffold_207890 | - | 16-37 | N/A | 0.99943 | Ortholog | 21/44 | 1/50 |
58 | oryLat2-459 | Oryzias latipes | mdo-miR-375 | 21/23 | ultracontig257 | - | 50-70 | 1252619-1252702 | 0.823573 | Ortholog | 21/44 | 1/50 |
59 | oryLat2-459 | Oryzias latipes | cap-miR-375 | 21/22 | ultracontig257 | - | 49-70 | 1252621-1252700 | 0.914792 | Ortholog | 21/44 | 1/50 |
60 | otoGar1-261 | Otolemur garnettii | dre-miR-375 | 20/22 | scaffold_120581.1-273652 | - | 49-68 | N/A | 0.999211 | Ortholog | 21/44 | 1/50 |
61 | otoGar1-261 | Otolemur garnettii | mdo-miR-375 | 23/23 | scaffold_120581.1-273652 | - | 48-70 | N/A | 0.999696 | Ortholog | 21/44 | 1/50 |
62 | ptr-mir-375 | Pan troglodytes | ptr-miR-375 | 22/22 | chr2b | - | 40-61 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
63 | petMar1-57 | Petromyzon marinus | hsa-miR-375 | 20/22 | Contig30000 | - | 50-69 | 223-298 | 0.998085 | Ortholog | 21/44 | 1/50 |
64 | petMar1-57 | Petromyzon marinus | mdo-miR-375 | 21/23 | Contig30000 | - | 50-70 | 222-299 | 0.99857 | Ortholog | 21/44 | 1/50 |
65 | petMar1-57 | Petromyzon marinus | cap-miR-375 | 20/22 | Contig30000 | - | 50-70 | 223-298 | 0.998625 | Ortholog | 21/44 | 1/50 |
66 | ponAbe2-556 | Pongo abelii | sko-miR-375 | 21/22 | chr2b | - | 49-70 | 110853417-110853497 | 0.999576 | Ortholog | 21/44 | 1/50 |
67 | ponAbe2-556 | Pongo abelii | mdo-miR-375 | 23/23 | chr2b | - | 48-70 | 110853417-110853497 | 0.999696 | Ortholog | 21/44 | 1/50 |
68 | ponAbe2-556 | Pongo abelii | dre-miR-375 | 20/22 | chr2b | - | 49-68 | 110853417-110853497 | 0.999211 | Ortholog | 21/44 | 1/50 |
69 | rno-mir-375 | Rattus norvegicus | rno-miR-375 | 22/22 | chr9 | - | 45-66 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
70 | sko-mir-375 | Saccoglossus kowalevskii | sko-miR-375 | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
71 | spu-mir-375 | Strongylocentrotus purpuratus | spu-miR-375 | 22/22 | N/A | N/A | 62-83 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
72 | taeGut1-306 | Taeniopygia guttata | mdo-miR-375 | 21/23 | chr7 | - | 50-70 | 10362253-10362353 | 0.848291 | Ortholog | 21/44 | 1/50 |
73 | taeGut1-306 | Taeniopygia guttata | cap-miR-375 | 21/22 | chr7 | - | 49-70 | 10362249-10362351 | 0.816004 | Ortholog | 21/44 | 1/50 |
74 | tni-mir-375 | Tetraodon nigroviridis | tni-miR-375 | 22/22 | chr2 | - | 49-70 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
75 | triCas2-86 | Tribolium castaneum | aga-miR-375 | 21/22 | ChLG8 | - | 49-70 | N/A | 0.996736 | Ortholog | 21/44 | 1/50 |
76 | tupBel1-492 | Tupaia belangeri | dre-miR-375 | 20/22 | scaffold_139836.1-93778 | - | 49-68 | N/A | 0.999211 | Ortholog | 21/44 | 1/50 |
77 | tupBel1-492 | Tupaia belangeri | mdo-miR-375 | 23/23 | scaffold_139836.1-93778 | - | 48-70 | N/A | 0.999696 | Ortholog | 21/44 | 1/50 |
78 | tupBel1-492 | Tupaia belangeri | sko-miR-375 | 21/22 | scaffold_139836.1-93778 | - | 49-70 | N/A | 0.999576 | Ortholog | 21/44 | 1/50 |
79 | xtr-mir-375 | Xenopus tropicalis | xtr-miR-375 | 22/22 | scaffold_77 | - | 41-62 | N/A | - | miRBase_13_0 | 21/44 | 1/50 |
Total | 79 record(s). |