- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-199 | Anolis carolinensis | hsa-miR-375 | 20/22 | scaffold_312 | + | 51-70 | 1503972-1504055 | 0.987509 | Ortholog | 21/44 | 1/50 |
2 | anoCar1-199 | Anolis carolinensis | mdo-miR-375 | 21/23 | scaffold_312 | + | 50-70 | 1503972-1504055 | 0.99176 | Ortholog | 21/44 | 1/50 |
3 | calJac1-477 | Callithrix jacchus | dre-miR-375 | 20/22 | Contig460 | + | 49-68 | 729421-729501 | 0.999211 | Ortholog | 21/44 | 1/50 |
4 | calJac1-477 | Callithrix jacchus | mdo-miR-375 | 23/23 | Contig460 | + | 48-70 | 729421-729501 | 0.999696 | Ortholog | 21/44 | 1/50 |
5 | calJac1-477 | Callithrix jacchus | sko-miR-375 | 21/22 | Contig460 | + | 49-70 | 729421-729501 | 0.999576 | Ortholog | 21/44 | 1/50 |
6 | cavPor3-763 | Cavia porcellus | sko-miR-375 | 21/22 | scaffold_89 | + | 49-70 | 6176376-6176456 | 0.999376 | Ortholog | 21/44 | 1/50 |
7 | cavPor3-763 | Cavia porcellus | mdo-miR-375 | 23/23 | scaffold_89 | + | 48-70 | 6176376-6176456 | 0.999562 | Ortholog | 21/44 | 1/50 |
8 | cavPor3-763 | Cavia porcellus | dre-miR-375 | 20/22 | scaffold_89 | + | 49-68 | 6176376-6176456 | 0.998846 | Ortholog | 21/44 | 1/50 |
9 | dasNov1-260 | Dasypus novemcinctus | sko-miR-375 | 21/22 | scaffold_48131 | - | 49-70 | N/A | 0.999576 | Ortholog | 21/44 | 1/50 |
10 | dasNov1-260 | Dasypus novemcinctus | mdo-miR-375 | 23/23 | scaffold_48131 | - | 48-70 | N/A | 0.999696 | Ortholog | 21/44 | 1/50 |
11 | dasNov1-260 | Dasypus novemcinctus | dre-miR-375 | 20/22 | scaffold_48131 | - | 49-68 | N/A | 0.999211 | Ortholog | 21/44 | 1/50 |
12 | droAna3-7 | Drosophila ananassae | aga-miR-375 | 20/22 | scaffold_12916 | + | 51-72 | N/A | 0.964604 | Ortholog | 21/44 | 1/50 |
13 | droEre2-123 | Drosophila erecta | aga-miR-375 | 20/22 | scaffold_4929 | + | 51-72 | 914710-914792 | 0.989183 | Ortholog | 21/44 | 1/50 |
14 | droMoj3-146 | Drosophila mojavensis | aga-miR-375 | 20/22 | scaffold_6500 | - | 49-70 | N/A | 0.973015 | Ortholog | 21/44 | 1/50 |
15 | droSec1-68 | Drosophila sechellia | aga-miR-375 | 20/22 | super_14 | + | 51-72 | 828179-828259 | 0.985704 | Ortholog | 21/44 | 1/50 |
16 | droSim1-24 | Drosophila simulans | aga-miR-375 | 20/22 | chr2L_random | + | 51-72 | 38986-39066 | 0.985704 | Ortholog | 21/44 | 1/50 |
17 | droVir3-112 | Drosophila virilis | aga-miR-375 | 20/22 | scaffold_12963 | + | 51-72 | N/A | 0.971715 | Ortholog | 21/44 | 1/50 |
18 | droYak2-1 | Drosophila yakuba | aga-miR-375 | 20/22 | chr2L | + | 51-72 | 841569-841651 | 0.989183 | Ortholog | 21/44 | 1/50 |
19 | equCab1-526 | Equus caballus | sko-miR-375 | 21/22 | chr6 | - | 49-70 | 8575996-8576076 | 0.999576 | Ortholog | 21/44 | 1/50 |
20 | equCab1-526 | Equus caballus | mdo-miR-375 | 23/23 | chr6 | - | 48-70 | 8575996-8576076 | 0.999696 | Ortholog | 21/44 | 1/50 |
21 | equCab1-526 | Equus caballus | dre-miR-375 | 20/22 | chr6 | - | 49-68 | 8575996-8576076 | 0.999211 | Ortholog | 21/44 | 1/50 |
22 | eriEur1-7 | Erinaceus europaeus | dre-miR-375 | 20/22 | scaffold_109553 | - | 49-68 | N/A | 0.999211 | Ortholog | 21/44 | 1/50 |
23 | eriEur1-7 | Erinaceus europaeus | mdo-miR-375 | 23/23 | scaffold_109553 | - | 48-70 | N/A | 0.999696 | Ortholog | 21/44 | 1/50 |
24 | eriEur1-7 | Erinaceus europaeus | sko-miR-375 | 21/22 | scaffold_109553 | - | 49-70 | N/A | 0.999576 | Ortholog | 21/44 | 1/50 |
25 | felCat3-185 | Felis catus | mdo-miR-375 | 23/23 | scaffold_162921 | - | 49-71 | 84477-84585 | 0.845282 | Ortholog | 21/44 | 1/50 |
26 | gasAcu1-618 | Gasterosteus aculeatus | cap-miR-375 | 21/22 | chrXVI | - | 49-70 | 14986886-14986965 | 0.898608 | Ortholog | 21/44 | 1/50 |
27 | oryCun1-417 | Oryctolagus cuniculus | dre-miR-375 | 20/22 | scaffold_207890 | - | 16-35 | N/A | 0.998982 | Ortholog | 21/44 | 1/50 |
28 | oryCun1-417 | Oryctolagus cuniculus | mdo-miR-375 | 23/23 | scaffold_207890 | - | 15-37 | N/A | 0.999562 | Ortholog | 21/44 | 1/50 |
29 | oryCun1-417 | Oryctolagus cuniculus | sko-miR-375 | 21/22 | scaffold_207890 | - | 16-37 | N/A | 0.99943 | Ortholog | 21/44 | 1/50 |
30 | oryLat2-459 | Oryzias latipes | cap-miR-375 | 21/22 | ultracontig257 | - | 49-70 | 1252621-1252700 | 0.914792 | Ortholog | 21/44 | 1/50 |
31 | oryLat2-459 | Oryzias latipes | mdo-miR-375 | 21/23 | ultracontig257 | - | 50-70 | 1252619-1252702 | 0.823573 | Ortholog | 21/44 | 1/50 |
32 | otoGar1-261 | Otolemur garnettii | mdo-miR-375 | 23/23 | scaffold_120581.1-273652 | - | 48-70 | N/A | 0.999696 | Ortholog | 21/44 | 1/50 |
33 | otoGar1-261 | Otolemur garnettii | dre-miR-375 | 20/22 | scaffold_120581.1-273652 | - | 49-68 | N/A | 0.999211 | Ortholog | 21/44 | 1/50 |
34 | petMar1-57 | Petromyzon marinus | hsa-miR-375 | 20/22 | Contig30000 | - | 50-69 | 223-298 | 0.998085 | Ortholog | 21/44 | 1/50 |
35 | petMar1-57 | Petromyzon marinus | mdo-miR-375 | 21/23 | Contig30000 | - | 50-70 | 222-299 | 0.99857 | Ortholog | 21/44 | 1/50 |
36 | petMar1-57 | Petromyzon marinus | cap-miR-375 | 20/22 | Contig30000 | - | 50-70 | 223-298 | 0.998625 | Ortholog | 21/44 | 1/50 |
37 | ponAbe2-556 | Pongo abelii | sko-miR-375 | 21/22 | chr2b | - | 49-70 | 110853417-110853497 | 0.999576 | Ortholog | 21/44 | 1/50 |
38 | ponAbe2-556 | Pongo abelii | dre-miR-375 | 20/22 | chr2b | - | 49-68 | 110853417-110853497 | 0.999211 | Ortholog | 21/44 | 1/50 |
39 | ponAbe2-556 | Pongo abelii | mdo-miR-375 | 23/23 | chr2b | - | 48-70 | 110853417-110853497 | 0.999696 | Ortholog | 21/44 | 1/50 |
40 | taeGut1-306 | Taeniopygia guttata | mdo-miR-375 | 21/23 | chr7 | - | 50-70 | 10362253-10362353 | 0.848291 | Ortholog | 21/44 | 1/50 |
41 | taeGut1-306 | Taeniopygia guttata | cap-miR-375 | 21/22 | chr7 | - | 49-70 | 10362249-10362351 | 0.816004 | Ortholog | 21/44 | 1/50 |
42 | triCas2-86 | Tribolium castaneum | aga-miR-375 | 21/22 | ChLG8 | - | 49-70 | N/A | 0.996736 | Ortholog | 21/44 | 1/50 |
43 | tupBel1-492 | Tupaia belangeri | sko-miR-375 | 21/22 | scaffold_139836.1-93778 | - | 49-70 | N/A | 0.999576 | Ortholog | 21/44 | 1/50 |
44 | tupBel1-492 | Tupaia belangeri | dre-miR-375 | 20/22 | scaffold_139836.1-93778 | - | 49-68 | N/A | 0.999211 | Ortholog | 21/44 | 1/50 |
45 | tupBel1-492 | Tupaia belangeri | mdo-miR-375 | 23/23 | scaffold_139836.1-93778 | - | 48-70 | N/A | 0.999696 | Ortholog | 21/44 | 1/50 |
Total | 45 record(s). |