- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-271 | Callithrix jacchus | cfa-miR-376c | 22/22 | Contig2207 | - | 16-37 | 230664-230749 | 0.97885 | Ortholog | 7/19 | 2/60 |
2 | calJac1-273 | Callithrix jacchus | cfa-miR-376c | 22/22 | Contig2207 | - | 16-37 | 231478-231563 | 0.987673 | Ortholog | 7/19 | 2/60 |
3 | cavPor3-109 | Cavia porcellus | hsa-miR-376a | 20/21 | scaffold_111 | + | 51-71 | 1095746-1095827 | 0.938318 | Ortholog | 7/19 | 1/60 |
4 | cavPor3-109 | Cavia porcellus | hsa-miR-376b | 22/22 | scaffold_111 | + | 51-72 | 1095746-1095827 | 0.954406 | Ortholog | 7/19 | 1/60 |
5 | cavPor3-109 | Cavia porcellus | cfa-miR-376c | 22/22 | scaffold_111 | + | 15-36 | 1095745-1095828 | 0.960931 | Ortholog | 7/19 | 1/60 |
6 | dasNov1-276 | Dasypus novemcinctus | hsa-miR-376c | 21/21 | scaffold_5303 | - | 50-70 | N/A | 0.994642 | Ortholog | 7/19 | 1/60 |
7 | dasNov1-276 | Dasypus novemcinctus | cfa-miR-376c | 22/22 | scaffold_5303 | - | 16-37 | N/A | 0.995583 | Ortholog | 7/19 | 1/60 |
8 | echTel1-15 | Echinops telfari | cfa-miR-376c | 22/22 | scaffold_155095 | + | 15-36 | N/A | 0.98298 | Ortholog | 7/19 | 3/60 |
9 | echTel1-16 | Echinops telfari | mmu-miR-376a | 20/21 | scaffold_155095 | + | 51-71 | N/A | 0.983099 | Ortholog | 7/19 | 3/60 |
10 | echTel1-17 | Echinops telfari | rno-miR-376a* | 21/21 | scaffold_155095 | + | 13-33 | N/A | 0.962568 | Ortholog | 7/19 | 3/60 |
11 | echTel1-17 | Echinops telfari | mmu-miR-376a* | 22/22 | scaffold_155095 | + | 13-34 | N/A | 0.971665 | Ortholog | 7/19 | 3/60 |
12 | echTel1-17 | Echinops telfari | hsa-miR-376a* | 22/22 | scaffold_155095 | + | 15-36 | N/A | 0.923021 | Ortholog | 7/19 | 3/60 |
13 | equCab1-339 | Equus caballus | bta-miR-376d | 21/21 | chr24 | + | 51-71 | 42409836-42409918 | 0.942136 | Ortholog | 7/19 | 4/60 |
14 | equCab1-339 | Equus caballus | hsa-miR-376a | 19/21 | chr24 | + | 52-70 | 42409835-42409919 | 0.938797 | Ortholog | 7/19 | 4/60 |
15 | equCab1-341 | Equus caballus | cfa-miR-376c | 22/22 | chr24 | + | 15-36 | 42410177-42410260 | 0.991005 | Ortholog | 7/19 | 4/60 |
16 | equCab1-342 | Equus caballus | bta-miR-376d | 21/21 | chr24 | + | 51-71 | 42410556-42410637 | 0.966129 | Ortholog | 7/19 | 4/60 |
17 | equCab1-342 | Equus caballus | hsa-miR-376a* | 20/22 | chr24 | + | 15-36 | 42410555-42410638 | 0.979529 | Ortholog | 7/19 | 4/60 |
18 | equCab1-342 | Equus caballus | hsa-miR-376a | 19/21 | chr24 | + | 52-70 | 42410555-42410638 | 0.961508 | Ortholog | 7/19 | 4/60 |
19 | equCab1-344 | Equus caballus | cfa-miR-376c | 22/22 | chr24 | + | 15-36 | 42410937-42411020 | 0.977033 | Ortholog | 7/19 | 4/60 |
20 | eriEur1-38 | Erinaceus europaeus | mmu-miR-376a | 20/21 | scaffold_223880 | + | 51-71 | N/A | 0.987636 | Ortholog | 7/19 | 1/60 |
21 | felCat3-94 | Felis catus | mmu-miR-376a | 20/21 | scaffold_147198 | + | 51-71 | 27759-27839 | 0.925408 | Ortholog | 7/19 | 5/60 |
22 | felCat3-95 | Felis catus | cfa-miR-376c | 22/22 | scaffold_147198 | + | 15-36 | 28122-28205 | 0.991005 | Ortholog | 7/19 | 5/60 |
23 | felCat3-96 | Felis catus | mmu-miR-376a | 20/21 | scaffold_147198 | + | 51-71 | 28484-28565 | 0.969984 | Ortholog | 7/19 | 5/60 |
24 | felCat3-98 | Felis catus | cfa-miR-376c | 22/22 | scaffold_147198 | + | 15-36 | 28865-28948 | 0.977033 | Ortholog | 7/19 | 5/60 |
25 | felCat3-99 | Felis catus | mmu-miR-376a* | 22/22 | scaffold_147198 | + | 13-34 | 29235-29316 | 0.971665 | Ortholog | 7/19 | 5/60 |
26 | felCat3-99 | Felis catus | hsa-miR-376a* | 22/22 | scaffold_147198 | + | 15-36 | 29234-29317 | 0.923021 | Ortholog | 7/19 | 5/60 |
27 | felCat3-99 | Felis catus | rno-miR-376a* | 21/21 | scaffold_147198 | + | 13-33 | 29235-29316 | 0.962568 | Ortholog | 7/19 | 5/60 |
28 | loxAfr1-107 | Loxodonta africana | cfa-miR-376c | 22/22 | scaffold_188159 | + | 15-36 | N/A | 0.991005 | Ortholog | 7/19 | 1/60 |
29 | oryCun1-34 | Oryctolagus cuniculus | cfa-miR-376c | 21/22 | scaffold_125203 | + | 16-37 | N/A | 0.999263 | Ortholog | 7/19 | 2/60 |
30 | oryCun1-34 | Oryctolagus cuniculus | bta-miR-376d | 19/21 | scaffold_125203 | + | 52-70 | N/A | 0.998592 | Ortholog | 7/19 | 2/60 |
31 | oryCun1-36 | Oryctolagus cuniculus | hsa-miR-376a | 20/21 | scaffold_125203 | + | 51-71 | N/A | 0.991233 | Ortholog | 7/19 | 2/60 |
32 | oryCun1-36 | Oryctolagus cuniculus | hsa-miR-376b | 22/22 | scaffold_125203 | + | 51-72 | N/A | 0.993808 | Ortholog | 7/19 | 2/60 |
33 | oryCun1-36 | Oryctolagus cuniculus | cfa-miR-376c | 21/22 | scaffold_125203 | + | 15-36 | N/A | 0.986607 | Ortholog | 7/19 | 2/60 |
34 | otoGar1-159 | Otolemur garnettii | mmu-miR-376a | 20/21 | scaffold_116158.1-127804 | + | 51-71 | N/A | 0.991673 | Ortholog | 7/19 | 4/60 |
35 | otoGar1-160 | Otolemur garnettii | cfa-miR-376c | 22/22 | scaffold_116158.1-127804 | + | 15-36 | N/A | 0.960931 | Ortholog | 7/19 | 4/60 |
36 | otoGar1-180 | Otolemur garnettii | mmu-miR-376a | 20/21 | scaffold_116159.1-4740 | + | 51-71 | N/A | 0.991673 | Ortholog | 7/19 | 4/60 |
37 | otoGar1-181 | Otolemur garnettii | cfa-miR-376c | 22/22 | scaffold_116159.1-4740 | + | 15-36 | N/A | 0.960931 | Ortholog | 7/19 | 4/60 |
38 | ponAbe2-213 | Pongo abelii | bta-miR-376d | 21/21 | chr14 | + | 47-67 | 102601477-102601552 | 0.818007 | Ortholog | 7/19 | 4/60 |
39 | ponAbe2-214 | Pongo abelii | cfa-miR-376c | 22/22 | chr14 | + | 15-36 | 102601809-102601892 | 0.991005 | Ortholog | 7/19 | 4/60 |
40 | ponAbe2-215 | Pongo abelii | mmu-miR-376a | 20/21 | chr14 | + | 51-71 | 102602201-102602282 | 0.977481 | Ortholog | 7/19 | 4/60 |
41 | ponAbe2-216 | Pongo abelii | cfa-miR-376c | 22/22 | chr14 | + | 15-36 | 102602579-102602662 | 0.99022 | Ortholog | 7/19 | 4/60 |
42 | tupBel1-648 | Tupaia belangeri | cfa-miR-376c | 22/22 | scaffold_146327.1-70409 | + | 15-36 | N/A | 0.991005 | Ortholog | 7/19 | 2/60 |
43 | tupBel1-650 | Tupaia belangeri | hsa-miR-376a | 20/21 | scaffold_146327.1-70409 | + | 51-71 | N/A | 0.987873 | Ortholog | 7/19 | 2/60 |
44 | tupBel1-650 | Tupaia belangeri | cfa-miR-376c | 22/22 | scaffold_146327.1-70409 | + | 15-36 | N/A | 0.978709 | Ortholog | 7/19 | 2/60 |
45 | tupBel1-650 | Tupaia belangeri | hsa-miR-376b | 22/22 | scaffold_146327.1-70409 | + | 51-72 | N/A | 0.99289 | Ortholog | 7/19 | 2/60 |
Total | 45 record(s). |