- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-378 | Bos taurus | bta-miR-378 | 22/22 | chr7 | + | 43-64 | N/A | - | miRBase_13_0 | 7/10 | 1/14 |
2 | canFam2-86 | Canis familiaris | hsa-miR-378* | 20/22 | chr17 | - | 50-70 | 11416805-11416893 | 0.964785 | Paralog | 7/10 | 2/14 |
3 | cfa-mir-378 | Canis familiaris | cfa-miR-378 | 22/22 | chr4 | - | 39-60 | N/A | - | miRBase_13_0 | 7/10 | 2/14 |
4 | cavPor3-749 | Cavia porcellus | cfa-miR-378 | 20/22 | scaffold_81 | + | 14-35 | 244046-244128 | 0.842754 | Ortholog | 7/10 | 1/14 |
5 | equCab1-664 | Equus caballus | hsa-miR-378 | 19/21 | chrUn | + | 52-71 | 271162818-271162911 | 0.916555 | Ortholog | 7/10 | 1/14 |
6 | equCab1-664 | Equus caballus | cfa-miR-378 | 20/22 | chrUn | + | 50-70 | 271162820-271162910 | 0.849393 | Ortholog | 7/10 | 1/14 |
7 | hg18-24 | Homo sapiens | cfa-miR-378 | 20/22 | chr10 | - | 10-29 | 132650840-132650919 | 0.967003 | Paralog | 7/10 | 2/14 |
8 | hsa-mir-378 | Homo sapiens | hsa-miR-378* | 22/22 | chr5 | + | 5-26 | 149092581-149092646 | - | miRBase_13_0 | 7/10 | 2/14 |
9 | hsa-mir-378 | Homo sapiens | hsa-miR-378 | 21/21 | chr5 | + | 43-63 | 149092581-149092646 | - | miRBase_13_0 | 7/10 | 2/14 |
10 | mml-mir-378 | Macaca mulatta | mml-miR-378 | 21/21 | chr6 | + | 43-63 | N/A | - | miRBase_13_0 | 7/10 | 2/14 |
11 | rheMac2-193 | Macaca mulatta | mml-miR-378 | 19/21 | chr2 | + | 42-61 | 50038824-50038900 | 0.81584 | Paralog | 7/10 | 2/14 |
12 | mmu-mir-378 | Mus musculus | mmu-miR-378* | 22/22 | chr18 | - | 5-26 | N/A | - | miRBase_13_0 | 7/10 | 1/14 |
13 | mmu-mir-378 | Mus musculus | mmu-miR-378 | 21/21 | chr18 | - | 43-63 | N/A | - | miRBase_13_0 | 7/10 | 1/14 |
14 | panTro2-129 | Pan troglodytes | ptr-miR-378 | 19/21 | chr22 | + | 33-51 | 19533174-19533274 | 0.882831 | Paralog | 7/10 | 2/14 |
15 | ptr-mir-378 | Pan troglodytes | ptr-miR-378 | 21/21 | chr5 | + | 42-62 | N/A | - | miRBase_13_0 | 7/10 | 2/14 |
16 | petMar1-102 | Petromyzon marinus | hsa-miR-378* | 20/22 | Contig7087 | - | 21-42 | 1844-1932 | 0.921687 | Ortholog | 7/10 | 1/14 |
17 | rno-mir-378 | Rattus norvegicus | rno-miR-378* | 22/22 | chr18 | - | 4-25 | N/A | - | miRBase_13_0 | 7/10 | 1/14 |
18 | rno-mir-378 | Rattus norvegicus | rno-miR-378 | 21/21 | chr18 | - | 42-62 | N/A | - | miRBase_13_0 | 7/10 | 1/14 |
Total | 18 record(s). |