- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-379 | Bos taurus | bta-miR-379 | 21/21 | chr21 | + | 16-36 | N/A | - | miRBase_13_0 | 7/18 | 1/28 |
2 | calJac1-288 | Callithrix jacchus | rno-miR-379* | 20/22 | Contig2207 | - | 50-70 | 249807-249886 | 0.969402 | Ortholog | 7/18 | 2/28 |
3 | calJac1-291 | Callithrix jacchus | hsa-miR-379 | 21/21 | Contig2207 | - | 16-36 | 251062-251147 | 0.988405 | Ortholog | 7/18 | 2/28 |
4 | calJac1-291 | Callithrix jacchus | rno-miR-379* | 22/22 | Contig2207 | - | 49-70 | 251066-251143 | 0.99611 | Ortholog | 7/18 | 2/28 |
5 | calJac1-291 | Callithrix jacchus | hsa-miR-379* | 22/22 | Contig2207 | - | 48-69 | 251068-251141 | 0.997811 | Ortholog | 7/18 | 2/28 |
6 | cfa-mir-379 | Canis familiaris | cfa-miR-379 | 21/21 | chr8 | + | 1-21 | N/A | - | miRBase_13_0 | 7/18 | 1/28 |
7 | cavPor3-89 | Cavia porcellus | hsa-miR-379 | 21/21 | scaffold_111 | + | 17-37 | 1082066-1082151 | 0.993602 | Ortholog | 7/18 | 2/28 |
8 | cavPor3-89 | Cavia porcellus | rno-miR-379* | 22/22 | scaffold_111 | + | 51-72 | 1082069-1082149 | 0.998111 | Ortholog | 7/18 | 2/28 |
9 | cavPor3-89 | Cavia porcellus | hsa-miR-379* | 22/22 | scaffold_111 | + | 51-72 | 1082070-1082148 | 0.998616 | Ortholog | 7/18 | 2/28 |
10 | cavPor3-92 | Cavia porcellus | rno-miR-379* | 20/22 | scaffold_111 | + | 51-71 | 1083256-1083337 | 0.982635 | Ortholog | 7/18 | 2/28 |
11 | dasNov1-289 | Dasypus novemcinctus | rno-miR-379* | 20/22 | scaffold_5303 | - | 50-70 | N/A | 0.969402 | Ortholog | 7/18 | 2/28 |
12 | dasNov1-292 | Dasypus novemcinctus | hsa-miR-379 | 21/21 | scaffold_5303 | - | 16-36 | N/A | 0.982316 | Ortholog | 7/18 | 2/28 |
13 | dasNov1-292 | Dasypus novemcinctus | hsa-miR-379* | 22/22 | scaffold_5303 | - | 48-69 | N/A | 0.998157 | Ortholog | 7/18 | 2/28 |
14 | dasNov1-292 | Dasypus novemcinctus | rno-miR-379* | 22/22 | scaffold_5303 | - | 49-70 | N/A | 0.996775 | Ortholog | 7/18 | 2/28 |
15 | echTel1-203 | Echinops telfari | hsa-miR-379* | 22/22 | scaffold_293632 | + | 50-71 | N/A | 0.999492 | Ortholog | 7/18 | 2/28 |
16 | echTel1-203 | Echinops telfari | rno-miR-379* | 22/22 | scaffold_293632 | + | 51-72 | N/A | 0.999282 | Ortholog | 7/18 | 2/28 |
17 | echTel1-205 | Echinops telfari | rno-miR-379* | 20/22 | scaffold_293632 | + | 51-71 | N/A | 0.982635 | Ortholog | 7/18 | 2/28 |
18 | equCab1-321 | Equus caballus | hsa-miR-379 | 21/21 | chr24 | + | 15-35 | 42393716-42393799 | 0.990242 | Ortholog | 7/18 | 2/28 |
19 | equCab1-321 | Equus caballus | rno-miR-379* | 22/22 | chr24 | + | 51-72 | 42393717-42393798 | 0.996748 | Ortholog | 7/18 | 2/28 |
20 | equCab1-321 | Equus caballus | hsa-miR-379* | 22/22 | chr24 | + | 50-71 | 42393719-42393796 | 0.998537 | Ortholog | 7/18 | 2/28 |
21 | equCab1-324 | Equus caballus | rno-miR-379* | 20/22 | chr24 | + | 51-71 | 42394977-42395058 | 0.982635 | Ortholog | 7/18 | 2/28 |
22 | felCat3-84 | Felis catus | rno-miR-379* | 22/22 | scaffold_147198 | + | 51-72 | 9171-9252 | 0.996461 | Ortholog | 7/18 | 2/28 |
23 | felCat3-85 | Felis catus | rno-miR-379* | 20/22 | scaffold_147198 | + | 51-71 | 10439-10520 | 0.982635 | Ortholog | 7/18 | 2/28 |
24 | hsa-mir-379 | Homo sapiens | hsa-miR-379 | 21/21 | chr14 | + | 6-26 | 100558156-100558222 | - | miRBase_13_0 | 7/18 | 1/28 |
25 | hsa-mir-379 | Homo sapiens | hsa-miR-379* | 22/22 | chr14 | + | 44-65 | 100558156-100558222 | - | miRBase_13_0 | 7/18 | 1/28 |
26 | loxAfr1-263 | Loxodonta africana | hsa-miR-379* | 22/22 | scaffold_4770 | + | 50-71 | N/A | 0.998537 | Ortholog | 7/18 | 1/28 |
27 | loxAfr1-263 | Loxodonta africana | hsa-miR-379 | 21/21 | scaffold_4770 | + | 15-35 | N/A | 0.990242 | Ortholog | 7/18 | 1/28 |
28 | loxAfr1-263 | Loxodonta africana | rno-miR-379* | 22/22 | scaffold_4770 | + | 51-72 | N/A | 0.996748 | Ortholog | 7/18 | 1/28 |
29 | mml-mir-379 | Macaca mulatta | mml-miR-379 | 21/21 | chr7 | + | 6-26 | N/A | - | miRBase_13_0 | 7/18 | 1/28 |
30 | mmu-mir-379 | Mus musculus | mmu-miR-379 | 21/21 | chr12 | + | 6-26 | N/A | - | miRBase_13_0 | 7/18 | 1/28 |
31 | oryCun1-121 | Oryctolagus cuniculus | hsa-miR-379* | 22/22 | scaffold_168327 | + | 50-71 | N/A | 0.997356 | Ortholog | 7/18 | 2/28 |
32 | oryCun1-121 | Oryctolagus cuniculus | rno-miR-379* | 22/22 | scaffold_168327 | + | 51-72 | N/A | 0.99611 | Ortholog | 7/18 | 2/28 |
33 | oryCun1-123 | Oryctolagus cuniculus | rno-miR-379* | 20/22 | scaffold_168327 | + | 51-71 | N/A | 0.982635 | Ortholog | 7/18 | 2/28 |
34 | otoGar1-141 | Otolemur garnettii | rno-miR-379* | 22/22 | scaffold_116158.1-127804 | + | 51-72 | N/A | 0.99611 | Ortholog | 7/18 | 2/28 |
35 | otoGar1-141 | Otolemur garnettii | hsa-miR-379* | 22/22 | scaffold_116158.1-127804 | + | 50-71 | N/A | 0.997356 | Ortholog | 7/18 | 2/28 |
36 | otoGar1-141 | Otolemur garnettii | hsa-miR-379 | 21/21 | scaffold_116158.1-127804 | + | 15-35 | N/A | 0.98932 | Ortholog | 7/18 | 2/28 |
37 | otoGar1-144 | Otolemur garnettii | rno-miR-379* | 20/22 | scaffold_116158.1-127804 | + | 51-71 | N/A | 0.927145 | Ortholog | 7/18 | 2/28 |
38 | ptr-mir-379 | Pan troglodytes | ptr-miR-379 | 21/21 | chr14 | + | 5-25 | N/A | - | miRBase_13_0 | 7/18 | 1/28 |
39 | ponAbe2-193 | Pongo abelii | hsa-miR-379* | 22/22 | chr14 | + | 50-71 | 102583472-102583549 | 0.998391 | Ortholog | 7/18 | 2/28 |
40 | ponAbe2-193 | Pongo abelii | rno-miR-379* | 22/22 | chr14 | + | 51-72 | 102583470-102583551 | 0.997653 | Ortholog | 7/18 | 2/28 |
41 | ponAbe2-193 | Pongo abelii | hsa-miR-379 | 21/21 | chr14 | + | 15-35 | 102583469-102583552 | 0.993026 | Ortholog | 7/18 | 2/28 |
42 | ponAbe2-196 | Pongo abelii | rno-miR-379* | 20/22 | chr14 | + | 51-71 | 102584737-102584818 | 0.982635 | Ortholog | 7/18 | 2/28 |
43 | rno-mir-379 | Rattus norvegicus | rno-miR-379 | 21/21 | chr6 | + | 16-36 | N/A | - | miRBase_13_0 | 7/18 | 1/28 |
44 | rno-mir-379 | Rattus norvegicus | rno-miR-379* | 22/22 | chr6 | + | 52-73 | N/A | - | miRBase_13_0 | 7/18 | 1/28 |
45 | tupBel1-630 | Tupaia belangeri | hsa-miR-379 | 21/21 | scaffold_146327.1-70409 | + | 15-35 | N/A | 0.992623 | Ortholog | 7/18 | 2/28 |
46 | tupBel1-630 | Tupaia belangeri | hsa-miR-379* | 22/22 | scaffold_146327.1-70409 | + | 50-71 | N/A | 0.998288 | Ortholog | 7/18 | 2/28 |
47 | tupBel1-630 | Tupaia belangeri | rno-miR-379* | 22/22 | scaffold_146327.1-70409 | + | 51-72 | N/A | 0.997504 | Ortholog | 7/18 | 2/28 |
48 | tupBel1-633 | Tupaia belangeri | rno-miR-379* | 20/22 | scaffold_146327.1-70409 | + | 51-71 | N/A | 0.982635 | Ortholog | 7/18 | 2/28 |
Total | 48 record(s). |