- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-380 | Bos taurus | bta-miR-380-3p | 21/21 | chr21 | + | 40-60 | N/A | - | miRBase_13_0 | 7/18 | 1/20 |
2 | bta-mir-380 | Bos taurus | bta-miR-380-5p | 22/22 | chr21 | + | 5-26 | N/A | - | miRBase_13_0 | 7/18 | 1/20 |
3 | calJac1-283 | Callithrix jacchus | mmu-miR-380-5p | 22/22 | Contig2207 | - | 16-37 | 248139-248225 | 0.988049 | Ortholog | 7/18 | 1/20 |
4 | calJac1-283 | Callithrix jacchus | bta-miR-380-5p | 22/22 | Contig2207 | - | 17-38 | 248139-248225 | 0.973238 | Ortholog | 7/18 | 1/20 |
5 | calJac1-283 | Callithrix jacchus | mml-miR-380 | 22/22 | Contig2207 | - | 49-70 | 248145-248222 | 0.996809 | Ortholog | 7/18 | 1/20 |
6 | calJac1-283 | Callithrix jacchus | cfa-miR-380 | 21/21 | Contig2207 | - | 50-70 | 248144-248223 | 0.99608 | Ortholog | 7/18 | 1/20 |
7 | cfa-mir-380 | Canis familiaris | cfa-miR-380 | 21/21 | chr8 | + | 37-57 | N/A | - | miRBase_13_0 | 7/18 | 1/20 |
8 | cavPor3-97 | Cavia porcellus | mml-miR-380 | 22/22 | scaffold_111 | + | 51-72 | 1084900-1084979 | 0.994287 | Ortholog | 7/18 | 1/20 |
9 | cavPor3-97 | Cavia porcellus | bta-miR-380-5p | 22/22 | scaffold_111 | + | 15-36 | 1084901-1084980 | 0.955035 | Ortholog | 7/18 | 1/20 |
10 | cavPor3-97 | Cavia porcellus | cfa-miR-380 | 21/21 | scaffold_111 | + | 51-71 | 1084900-1084979 | 0.996323 | Ortholog | 7/18 | 1/20 |
11 | cavPor3-97 | Cavia porcellus | mmu-miR-380-5p | 22/22 | scaffold_111 | + | 14-35 | 1084901-1084980 | 0.979504 | Ortholog | 7/18 | 1/20 |
12 | dasNov1-286 | Dasypus novemcinctus | bta-miR-380-5p | 22/22 | scaffold_5303 | - | 15-36 | N/A | 0.952376 | Ortholog | 7/18 | 1/20 |
13 | dasNov1-286 | Dasypus novemcinctus | mmu-miR-380-5p | 22/22 | scaffold_5303 | - | 14-35 | N/A | 0.978278 | Ortholog | 7/18 | 1/20 |
14 | dasNov1-286 | Dasypus novemcinctus | cfa-miR-380 | 21/21 | scaffold_5303 | - | 50-70 | N/A | 0.99608 | Ortholog | 7/18 | 1/20 |
15 | droYak2-90 | Drosophila yakuba | mml-miR-380 | 20/22 | chr3L | - | 49-70 | 22928795-22928867 | 0.836311 | Ortholog | 7/18 | 2/20 |
16 | droYak2-90 | Drosophila yakuba | cfa-miR-380 | 19/21 | chr3L | - | 48-68 | 22928794-22928866 | 0.887814 | Ortholog | 7/18 | 2/20 |
17 | droYak2-92 | Drosophila yakuba | mml-miR-380 | 20/22 | chr3L | - | 49-70 | 22931612-22931684 | 0.836311 | Ortholog | 7/18 | 2/20 |
18 | droYak2-92 | Drosophila yakuba | cfa-miR-380 | 19/21 | chr3L | - | 49-69 | 22931612-22931684 | 0.849547 | Ortholog | 7/18 | 2/20 |
19 | echTel1-209 | Echinops telfari | mmu-miR-380-5p | 21/22 | scaffold_293632 | + | 21-42 | N/A | 0.987556 | Ortholog | 7/18 | 1/20 |
20 | echTel1-209 | Echinops telfari | bta-miR-380-5p | 21/22 | scaffold_293632 | + | 22-43 | N/A | 0.9719 | Ortholog | 7/18 | 1/20 |
21 | echTel1-209 | Echinops telfari | mml-miR-380 | 22/22 | scaffold_293632 | + | 51-72 | N/A | 0.997622 | Ortholog | 7/18 | 1/20 |
22 | echTel1-209 | Echinops telfari | cfa-miR-380 | 21/21 | scaffold_293632 | + | 51-71 | N/A | 0.997274 | Ortholog | 7/18 | 1/20 |
23 | equCab1-329 | Equus caballus | cfa-miR-380 | 21/21 | chr24 | + | 50-70 | 42396664-42396743 | 0.999412 | Ortholog | 7/18 | 1/20 |
24 | equCab1-329 | Equus caballus | mml-miR-380 | 22/22 | chr24 | + | 50-71 | 42396664-42396743 | 0.999475 | Ortholog | 7/18 | 1/20 |
25 | equCab1-329 | Equus caballus | bta-miR-380-5p | 20/22 | chr24 | + | 16-36 | 42396664-42396743 | 0.946437 | Ortholog | 7/18 | 1/20 |
26 | felCat3-89 | Felis catus | cfa-miR-380 | 21/21 | scaffold_147198 | + | 50-70 | 12114-12193 | 0.996369 | Ortholog | 7/18 | 1/20 |
27 | felCat3-89 | Felis catus | mml-miR-380 | 22/22 | scaffold_147198 | + | 50-71 | 12114-12193 | 0.996815 | Ortholog | 7/18 | 1/20 |
28 | felCat3-89 | Felis catus | mmu-miR-380-5p | 22/22 | scaffold_147198 | + | 14-35 | 12114-12193 | 0.979899 | Ortholog | 7/18 | 1/20 |
29 | felCat3-89 | Felis catus | bta-miR-380-5p | 22/22 | scaffold_147198 | + | 15-36 | 12114-12193 | 0.956173 | Ortholog | 7/18 | 1/20 |
30 | hsa-mir-380 | Homo sapiens | hsa-miR-380* | 22/22 | chr14 | + | 5-26 | 100561107-100561167 | - | miRBase_13_0 | 7/18 | 1/20 |
31 | hsa-mir-380 | Homo sapiens | hsa-miR-380 | 22/22 | chr14 | + | 40-61 | 100561107-100561167 | - | miRBase_13_0 | 7/18 | 1/20 |
32 | loxAfr1-247 | Loxodonta africana | mml-miR-380 | 22/22 | scaffold_44287 | - | 49-70 | N/A | 0.997645 | Ortholog | 7/18 | 2/20 |
33 | loxAfr1-247 | Loxodonta africana | mmu-miR-380-5p | 22/22 | scaffold_44287 | - | 14-35 | N/A | 0.983052 | Ortholog | 7/18 | 2/20 |
34 | loxAfr1-247 | Loxodonta africana | bta-miR-380-5p | 22/22 | scaffold_44287 | - | 15-36 | N/A | 0.963009 | Ortholog | 7/18 | 2/20 |
35 | loxAfr1-247 | Loxodonta africana | cfa-miR-380 | 21/21 | scaffold_44287 | - | 50-70 | N/A | 0.996989 | Ortholog | 7/18 | 2/20 |
36 | loxAfr1-268 | Loxodonta africana | bta-miR-380-5p | 22/22 | scaffold_4770 | + | 15-36 | N/A | 0.963009 | Ortholog | 7/18 | 2/20 |
37 | loxAfr1-268 | Loxodonta africana | cfa-miR-380 | 21/21 | scaffold_4770 | + | 50-70 | N/A | 0.996989 | Ortholog | 7/18 | 2/20 |
38 | loxAfr1-268 | Loxodonta africana | mmu-miR-380-5p | 22/22 | scaffold_4770 | + | 14-35 | N/A | 0.983052 | Ortholog | 7/18 | 2/20 |
39 | loxAfr1-268 | Loxodonta africana | mml-miR-380 | 22/22 | scaffold_4770 | + | 50-71 | N/A | 0.997355 | Ortholog | 7/18 | 2/20 |
40 | mml-mir-380 | Macaca mulatta | mml-miR-380 | 22/22 | chr7 | + | 40-61 | N/A | - | miRBase_13_0 | 7/18 | 1/20 |
41 | mmu-mir-380 | Mus musculus | mmu-miR-380-5p | 22/22 | chr12 | + | 4-25 | N/A | - | miRBase_13_0 | 7/18 | 1/20 |
42 | mmu-mir-380 | Mus musculus | mmu-miR-380-3p | 22/22 | chr12 | + | 40-61 | N/A | - | miRBase_13_0 | 7/18 | 1/20 |
43 | otoGar1-148 | Otolemur garnettii | cfa-miR-380 | 20/21 | scaffold_116158.1-127804 | + | 50-70 | N/A | 0.998217 | Ortholog | 7/18 | 1/20 |
44 | otoGar1-148 | Otolemur garnettii | mml-miR-380 | 21/22 | scaffold_116158.1-127804 | + | 50-71 | N/A | 0.998308 | Ortholog | 7/18 | 1/20 |
45 | otoGar1-148 | Otolemur garnettii | bta-miR-380-5p | 22/22 | scaffold_116158.1-127804 | + | 15-36 | N/A | 0.970427 | Ortholog | 7/18 | 1/20 |
46 | otoGar1-148 | Otolemur garnettii | mmu-miR-380-5p | 22/22 | scaffold_116158.1-127804 | + | 14-35 | N/A | 0.986455 | Ortholog | 7/18 | 1/20 |
47 | ptr-mir-380 | Pan troglodytes | ptr-miR-380 | 22/22 | chr14 | + | 39-60 | N/A | - | miRBase_13_0 | 7/18 | 1/20 |
48 | ponAbe2-201 | Pongo abelii | mmu-miR-380-5p | 22/22 | chr14 | + | 14-35 | 102586421-102586499 | 0.935605 | Ortholog | 7/18 | 1/20 |
49 | ponAbe2-201 | Pongo abelii | bta-miR-380-5p | 22/22 | chr14 | + | 17-38 | 102586419-102586504 | 0.924513 | Ortholog | 7/18 | 1/20 |
50 | rno-mir-380 | Rattus norvegicus | rno-miR-380 | 22/22 | chr6 | + | 11-32 | N/A | - | miRBase_13_0 | 7/18 | 1/20 |
51 | tupBel1-638 | Tupaia belangeri | bta-miR-380-5p | 21/22 | scaffold_146327.1-70409 | + | 15-36 | N/A | 0.910292 | Ortholog | 7/18 | 1/20 |
52 | tupBel1-638 | Tupaia belangeri | mmu-miR-380-5p | 21/22 | scaffold_146327.1-70409 | + | 14-35 | N/A | 0.964989 | Ortholog | 7/18 | 1/20 |
53 | tupBel1-638 | Tupaia belangeri | cfa-miR-380 | 20/21 | scaffold_146327.1-70409 | + | 50-70 | N/A | 0.99773 | Ortholog | 7/18 | 1/20 |
54 | tupBel1-638 | Tupaia belangeri | mml-miR-380 | 21/22 | scaffold_146327.1-70409 | + | 50-71 | N/A | 0.99785 | Ortholog | 7/18 | 1/20 |
Total | 54 record(s). |