- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-409 | Bos taurus | bta-miR-409 | 23/23 | chr21 | + | 15-37 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
2 | braFlo1-102 | Branchiostoma floridae | rno-miR-409-3p | 18/20 | chrUn | - | 33-51 | 77789173-77789274 | 0.905946 | Ortholog | 7/16 | 1/16 |
3 | calJac1-248 | Callithrix jacchus | mmu-miR-409-5p | 23/23 | Contig2207 | - | 15-37 | 204672-204750 | 0.999025 | Ortholog | 7/16 | 1/16 |
4 | calJac1-248 | Callithrix jacchus | rno-miR-409-5p | 20/20 | Contig2207 | - | 15-34 | 204672-204750 | 0.998299 | Ortholog | 7/16 | 1/16 |
5 | calJac1-248 | Callithrix jacchus | rno-miR-409-3p | 20/20 | Contig2207 | - | 48-67 | 204672-204750 | 0.992016 | Ortholog | 7/16 | 1/16 |
6 | calJac1-248 | Callithrix jacchus | cfa-miR-409 | 20/21 | Contig2207 | - | 48-68 | 204672-204750 | 0.996505 | Ortholog | 7/16 | 1/16 |
7 | calJac1-248 | Callithrix jacchus | mmu-miR-409-3p | 22/22 | Contig2207 | - | 47-68 | 204672-204750 | 0.993407 | Ortholog | 7/16 | 1/16 |
8 | cfa-mir-409 | Canis familiaris | cfa-miR-409 | 21/21 | chr8 | + | 34-54 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
9 | cavPor3-126 | Cavia porcellus | rno-miR-409-5p | 19/20 | scaffold_111 | + | 20-39 | 1117053-1117139 | 0.967598 | Ortholog | 7/16 | 1/16 |
10 | cavPor3-126 | Cavia porcellus | mmu-miR-409-3p | 22/22 | scaffold_111 | + | 50-71 | 1117055-1117139 | 0.830444 | Ortholog | 7/16 | 1/16 |
11 | cavPor3-126 | Cavia porcellus | mmu-miR-409-5p | 22/23 | scaffold_111 | + | 20-42 | 1117053-1117139 | 0.966278 | Ortholog | 7/16 | 1/16 |
12 | cavPor3-126 | Cavia porcellus | cfa-miR-409 | 20/21 | scaffold_111 | + | 51-71 | 1117055-1117139 | 0.889505 | Ortholog | 7/16 | 1/16 |
13 | echTel1-81 | Echinops telfari | mmu-miR-409-5p | 23/23 | scaffold_230449 | - | 20-42 | N/A | 0.983696 | Ortholog | 7/16 | 1/16 |
14 | echTel1-81 | Echinops telfari | rno-miR-409-3p | 20/20 | scaffold_230449 | - | 50-69 | N/A | 0.990683 | Ortholog | 7/16 | 1/16 |
15 | echTel1-81 | Echinops telfari | rno-miR-409-5p | 20/20 | scaffold_230449 | - | 20-39 | N/A | 0.978615 | Ortholog | 7/16 | 1/16 |
16 | echTel1-81 | Echinops telfari | mmu-miR-409-3p | 21/22 | scaffold_230449 | - | 49-69 | N/A | 0.98281 | Ortholog | 7/16 | 1/16 |
17 | equCab1-364 | Equus caballus | cfa-miR-409 | 20/21 | chr24 | + | 48-68 | 42434715-42434793 | 0.998248 | Ortholog | 7/16 | 1/16 |
18 | equCab1-364 | Equus caballus | rno-miR-409-3p | 20/20 | chr24 | + | 48-67 | 42434715-42434793 | 0.995993 | Ortholog | 7/16 | 1/16 |
19 | equCab1-364 | Equus caballus | rno-miR-409-5p | 20/20 | chr24 | + | 15-34 | 42434715-42434793 | 0.999138 | Ortholog | 7/16 | 1/16 |
20 | equCab1-364 | Equus caballus | mmu-miR-409-3p | 22/22 | chr24 | + | 47-68 | 42434715-42434793 | 0.996774 | Ortholog | 7/16 | 1/16 |
21 | equCab1-364 | Equus caballus | mmu-miR-409-5p | 23/23 | chr24 | + | 15-37 | 42434715-42434793 | 0.999193 | Ortholog | 7/16 | 1/16 |
22 | hsa-mir-409 | Homo sapiens | hsa-miR-409-5p | 23/23 | chr14 | + | 15-37 | 100601390-100601468 | - | miRBase_13_0 | 7/16 | 1/16 |
23 | hsa-mir-409 | Homo sapiens | hsa-miR-409-3p | 22/22 | chr14 | + | 47-68 | 100601390-100601468 | - | miRBase_13_0 | 7/16 | 1/16 |
24 | loxAfr1-409 | Loxodonta africana | cfa-miR-409 | 20/21 | scaffold_89837 | + | 50-70 | N/A | 0.999154 | Ortholog | 7/16 | 1/16 |
25 | loxAfr1-409 | Loxodonta africana | rno-miR-409-5p | 20/20 | scaffold_89837 | + | 17-36 | N/A | 0.999595 | Ortholog | 7/16 | 1/16 |
26 | loxAfr1-409 | Loxodonta africana | rno-miR-409-3p | 20/20 | scaffold_89837 | + | 50-69 | N/A | 0.998108 | Ortholog | 7/16 | 1/16 |
27 | loxAfr1-409 | Loxodonta africana | mmu-miR-409-3p | 22/22 | scaffold_89837 | + | 49-70 | N/A | 0.998467 | Ortholog | 7/16 | 1/16 |
28 | loxAfr1-409 | Loxodonta africana | mmu-miR-409-5p | 23/23 | scaffold_89837 | + | 17-39 | N/A | 0.999636 | Ortholog | 7/16 | 1/16 |
29 | mml-mir-409 | Macaca mulatta | mml-miR-409-3p | 22/22 | chr7 | + | 47-68 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
30 | mml-mir-409 | Macaca mulatta | mml-miR-409-5p | 23/23 | chr7 | + | 15-37 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
31 | mmu-mir-409 | Mus musculus | mmu-miR-409-3p | 22/22 | chr12 | + | 47-68 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
32 | mmu-mir-409 | Mus musculus | mmu-miR-409-5p | 23/23 | chr12 | + | 15-37 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
33 | otoGar1-174 | Otolemur garnettii | cfa-miR-409 | 20/21 | scaffold_116158.1-127804 | + | 50-70 | N/A | 0.998754 | Ortholog | 7/16 | 1/16 |
34 | otoGar1-174 | Otolemur garnettii | rno-miR-409-3p | 20/20 | scaffold_116158.1-127804 | + | 50-69 | N/A | 0.997196 | Ortholog | 7/16 | 1/16 |
35 | otoGar1-174 | Otolemur garnettii | rno-miR-409-5p | 20/20 | scaffold_116158.1-127804 | + | 17-36 | N/A | 0.999411 | Ortholog | 7/16 | 1/16 |
36 | otoGar1-174 | Otolemur garnettii | mmu-miR-409-3p | 22/22 | scaffold_116158.1-127804 | + | 49-70 | N/A | 0.997703 | Ortholog | 7/16 | 1/16 |
37 | otoGar1-174 | Otolemur garnettii | mmu-miR-409-5p | 23/23 | scaffold_116158.1-127804 | + | 17-39 | N/A | 0.999466 | Ortholog | 7/16 | 1/16 |
38 | ptr-mir-409 | Pan troglodytes | ptr-miR-409 | 22/22 | chr14 | + | 46-67 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
39 | ponAbe2-236 | Pongo abelii | rno-miR-409-5p | 20/20 | chr14 | + | 15-34 | 102628022-102628100 | 0.999138 | Ortholog | 7/16 | 1/16 |
40 | ponAbe2-236 | Pongo abelii | mmu-miR-409-3p | 22/22 | chr14 | + | 47-68 | 102628022-102628100 | 0.996774 | Ortholog | 7/16 | 1/16 |
41 | ponAbe2-236 | Pongo abelii | mmu-miR-409-5p | 23/23 | chr14 | + | 15-37 | 102628022-102628100 | 0.999193 | Ortholog | 7/16 | 1/16 |
42 | ponAbe2-236 | Pongo abelii | rno-miR-409-3p | 20/20 | chr14 | + | 48-67 | 102628022-102628100 | 0.995993 | Ortholog | 7/16 | 1/16 |
43 | ponAbe2-236 | Pongo abelii | cfa-miR-409 | 20/21 | chr14 | + | 48-68 | 102628022-102628100 | 0.998248 | Ortholog | 7/16 | 1/16 |
44 | rno-mir-409 | Rattus norvegicus | rno-miR-409-5p | 20/20 | chr6 | + | 14-33 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
45 | rno-mir-409 | Rattus norvegicus | rno-miR-409-3p | 20/20 | chr6 | + | 47-66 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
46 | tupBel1-658 | Tupaia belangeri | mmu-miR-409-5p | 23/23 | scaffold_146327.1-70409 | + | 15-37 | N/A | 0.998692 | Ortholog | 7/16 | 1/16 |
47 | tupBel1-658 | Tupaia belangeri | cfa-miR-409 | 20/21 | scaffold_146327.1-70409 | + | 48-68 | N/A | 0.997191 | Ortholog | 7/16 | 1/16 |
48 | tupBel1-658 | Tupaia belangeri | rno-miR-409-3p | 20/20 | scaffold_146327.1-70409 | + | 48-67 | N/A | 0.993571 | Ortholog | 7/16 | 1/16 |
49 | tupBel1-658 | Tupaia belangeri | rno-miR-409-5p | 20/20 | scaffold_146327.1-70409 | + | 15-34 | N/A | 0.99863 | Ortholog | 7/16 | 1/16 |
50 | tupBel1-658 | Tupaia belangeri | mmu-miR-409-3p | 22/22 | scaffold_146327.1-70409 | + | 47-68 | N/A | 0.994732 | Ortholog | 7/16 | 1/16 |
Total | 50 record(s). |