- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-429 | Bos taurus | bta-miR-429 | 22/22 | chr16 | - | 52-73 | N/A | - | miRBase_13_0 | 13/25 | 1/27 |
2 | caeRem3-23 | Caenorhabditis remanei | xla-miR-429 | 19/21 | chrUn | + | 51-71 | 132170892-132170970 | 0.903545 | Ortholog | 13/25 | 1/27 |
3 | calJac1-464 | Callithrix jacchus | hsa-miR-429 | 22/22 | Contig4288 | - | 49-70 | 161462-161542 | 0.999792 | Ortholog | 13/25 | 1/27 |
4 | cfa-mir-429 | Canis familiaris | cfa-miR-429 | 22/22 | chr5 | + | 53-74 | N/A | - | miRBase_13_0 | 13/25 | 1/27 |
5 | danRer5-283 | Danio rerio | xla-miR-429 | 19/21 | chr6 | - | 50-69 | 27506446-27506528 | 0.99578 | Paralog | 13/25 | 2/27 |
6 | dre-mir-429 | Danio rerio | dre-miR-429 | 22/22 | chr23 | + | 51-72 | N/A | - | miRBase_13_0 | 13/25 | 2/27 |
7 | equCab1-735 | Equus caballus | xla-miR-429 | 21/21 | chrUn | - | 50-70 | 253928643-253928723 | 0.999406 | Ortholog | 13/25 | 1/27 |
8 | equCab1-735 | Equus caballus | mmu-miR-429 | 22/22 | chrUn | - | 49-70 | 253928643-253928722 | 0.999555 | Ortholog | 13/25 | 1/27 |
9 | eriEur1-173 | Erinaceus europaeus | mmu-miR-429 | 22/22 | scaffold_348240 | + | 51-72 | N/A | 0.999809 | Ortholog | 13/25 | 1/27 |
10 | eriEur1-173 | Erinaceus europaeus | xla-miR-429 | 21/21 | scaffold_348240 | + | 51-71 | N/A | 0.999714 | Ortholog | 13/25 | 1/27 |
11 | fr2-300 | Fugu rubripes | oan-miR-429* | 19/21 | chrUn | - | 16-36 | 214532833-214532917 | 0.995838 | Paralog | 13/25 | 2/27 |
12 | fr2-300 | Fugu rubripes | fru-miR-429 | 22/22 | chrUn | - | 49-70 | 214532835-214532914 | 0.99274 | Paralog | 13/25 | 2/27 |
13 | fr2-300 | Fugu rubripes | xla-miR-429 | 21/21 | chrUn | - | 50-70 | 214532834-214532915 | 0.989998 | Paralog | 13/25 | 2/27 |
14 | fru-mir-429 | Fugu rubripes | fru-miR-429 | 22/22 | scaffold_147 | - | 51-72 | N/A | - | miRBase_13_0 | 13/25 | 2/27 |
15 | gga-mir-429 | Gallus gallus | gga-miR-429 | 22/22 | chr21 | - | 52-73 | N/A | - | miRBase_13_0 | 13/25 | 1/27 |
16 | gasAcu1-457 | Gasterosteus aculeatus | oan-miR-429* | 19/21 | chrXII | + | 16-36 | 5710814-5710898 | 0.998132 | Ortholog | 13/25 | 1/27 |
17 | gasAcu1-457 | Gasterosteus aculeatus | mmu-miR-429 | 22/22 | chrXII | + | 50-71 | 5710816-5710897 | 0.997137 | Ortholog | 13/25 | 1/27 |
18 | gasAcu1-457 | Gasterosteus aculeatus | xla-miR-429 | 21/21 | chrXII | + | 50-70 | 5710816-5710897 | 0.996084 | Ortholog | 13/25 | 1/27 |
19 | hsa-mir-429 | Homo sapiens | hsa-miR-429 | 22/22 | chr1 | + | 51-72 | 1094248-1094330 | - | miRBase_13_0 | 13/25 | 1/27 |
20 | loxAfr1-38 | Loxodonta africana | oan-miR-429* | 20/21 | scaffold_124950 | + | 16-36 | N/A | 0.998706 | Ortholog | 13/25 | 1/27 |
21 | mml-mir-429 | Macaca mulatta | mml-miR-429 | 22/22 | chr1 | + | 51-72 | N/A | - | miRBase_13_0 | 13/25 | 1/27 |
22 | monDom4-309 | Monodelphis domestica | oan-miR-429* | 21/21 | chr4 | + | 18-38 | 380898025-380898111 | 0.963167 | Ortholog | 13/25 | 1/27 |
23 | mmu-mir-429 | Mus musculus | mmu-miR-429 | 22/22 | chr4 | - | 51-72 | N/A | - | miRBase_13_0 | 13/25 | 1/27 |
24 | oan-mir-429 | Ornithorhynchus anatinus | oan-miR-429 | 22/22 | Ultra168 | + | 64-85 | N/A | - | miRBase_13_0 | 13/25 | 1/27 |
25 | oan-mir-429 | Ornithorhynchus anatinus | oan-miR-429* | 21/21 | Ultra168 | + | 28-48 | N/A | - | miRBase_13_0 | 13/25 | 1/27 |
26 | oryLat2-364 | Oryzias latipes | xla-miR-429 | 21/21 | chr7 | - | 50-70 | 216477-216558 | 0.994612 | Ortholog | 13/25 | 1/27 |
27 | oryLat2-364 | Oryzias latipes | mmu-miR-429 | 22/22 | chr7 | - | 49-70 | 216478-216557 | 0.993836 | Ortholog | 13/25 | 1/27 |
28 | oryLat2-364 | Oryzias latipes | oan-miR-429* | 19/21 | chr7 | - | 16-36 | 216476-216560 | 0.993817 | Ortholog | 13/25 | 1/27 |
29 | otoGar1-103 | Otolemur garnettii | mmu-miR-429 | 21/22 | scaffold_112009.1-54710 | - | 49-70 | N/A | 0.999627 | Ortholog | 13/25 | 1/27 |
30 | otoGar1-103 | Otolemur garnettii | xla-miR-429 | 20/21 | scaffold_112009.1-54710 | - | 49-69 | N/A | 0.999527 | Ortholog | 13/25 | 1/27 |
31 | ponAbe2-68 | Pongo abelii | hsa-miR-429 | 22/22 | chr1 | - | 49-70 | 229421343-229421426 | 0.999895 | Ortholog | 13/25 | 1/27 |
32 | rno-mir-429 | Rattus norvegicus | rno-miR-429 | 22/22 | chr5 | - | 53-74 | N/A | - | miRBase_13_0 | 13/25 | 1/27 |
33 | sorAra1-14 | Sorex araneus | mmu-miR-429 | 20/22 | scaffold_141740 | - | 49-68 | N/A | 0.995345 | Ortholog | 13/25 | 1/27 |
34 | tni-mir-429 | Tetraodon nigroviridis | tni-miR-429 | 22/22 | chrUn_random | + | 53-74 | N/A | - | miRBase_13_0 | 13/25 | 1/27 |
35 | tupBel1-541 | Tupaia belangeri | xla-miR-429 | 21/21 | scaffold_142375.1-90397 | - | 50-70 | N/A | 0.999815 | Ortholog | 13/25 | 1/27 |
36 | xla-mir-429 | Xenopus laevis | xla-miR-429 | 21/21 | N/A | N/A | 43-63 | N/A | - | miRBase_13_0 | 13/25 | 1/27 |
37 | xtr-mir-429 | Xenopus tropicalis | xtr-miR-429 | 22/22 | scaffold_985 | + | 53-74 | N/A | - | miRBase_13_0 | 13/25 | 1/27 |
Total | 37 record(s). |