- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-449a | Bos taurus | bta-miR-449a | 22/22 | chr20 | + | 13-34 | N/A | - | miRBase_13_0 | 11/22 | 3/42 |
2 | bta-mir-449b | Bos taurus | bta-miR-449b | 22/22 | chr20 | + | 16-37 | N/A | - | miRBase_13_0 | 11/22 | 3/42 |
3 | bta-mir-449c | Bos taurus | bta-miR-449c | 21/21 | chr20 | + | 23-43 | N/A | - | miRBase_13_0 | 11/22 | 3/42 |
4 | cfa-mir-449 | Canis familiaris | cfa-miR-449 | 22/22 | chr2 | - | 16-37 | N/A | - | miRBase_13_0 | 11/22 | 1/42 |
5 | gga-mir-449 | Gallus gallus | gga-miR-449 | 21/21 | chrZ | - | 16-36 | N/A | - | miRBase_13_0 | 11/22 | 3/42 |
6 | gga-mir-449b | Gallus gallus | gga-miR-449b | 23/23 | chrZ | - | 13-35 | N/A | - | miRBase_13_0 | 11/22 | 3/42 |
7 | gga-mir-449b | Gallus gallus | gga-miR-449b* | 21/21 | chrZ | - | 51-71 | N/A | - | miRBase_13_0 | 11/22 | 3/42 |
8 | gga-mir-449c | Gallus gallus | gga-miR-449c | 24/24 | chrZ | - | 7-30 | N/A | - | miRBase_13_0 | 11/22 | 3/42 |
9 | gga-mir-449c | Gallus gallus | gga-miR-449c* | 22/22 | chrZ | - | 47-68 | N/A | - | miRBase_13_0 | 11/22 | 3/42 |
10 | hsa-mir-449a | Homo sapiens | hsa-miR-449a | 22/22 | chr5 | - | 16-37 | 54502117-54502207 | - | miRBase_13_0 | 11/22 | 2/42 |
11 | hsa-mir-449b | Homo sapiens | hsa-miR-449b | 22/22 | chr5 | - | 16-37 | 54502231-54502327 | - | miRBase_13_0 | 11/22 | 2/42 |
12 | hsa-mir-449b | Homo sapiens | hsa-miR-449b* | 22/22 | chr5 | - | 55-76 | 54502231-54502327 | - | miRBase_13_0 | 11/22 | 2/42 |
13 | mml-mir-449a | Macaca mulatta | mml-miR-449a | 22/22 | chr6 | - | 16-37 | N/A | - | miRBase_13_0 | 11/22 | 2/42 |
14 | mml-mir-449b | Macaca mulatta | mml-miR-449b | 22/22 | chr6 | - | 16-37 | N/A | - | miRBase_13_0 | 11/22 | 2/42 |
15 | mdo-mir-449 | Monodelphis domestica | mdo-miR-449 | 22/22 | chr3 | - | 11-32 | N/A | - | miRBase_13_0 | 11/22 | 2/42 |
16 | mmu-mir-449a | Mus musculus | mmu-miR-449a | 22/22 | chr13 | + | 16-37 | N/A | - | miRBase_13_0 | 11/22 | 3/42 |
17 | mmu-mir-449b | Mus musculus | mmu-miR-449b | 20/20 | chr13 | + | 11-30 | N/A | - | miRBase_13_0 | 11/22 | 3/42 |
18 | mmu-mir-449c | Mus musculus | mmu-miR-449c | 21/21 | chr13 | + | 26-46 | N/A | - | miRBase_13_0 | 11/22 | 3/42 |
19 | oan-mir-449a | Ornithorhynchus anatinus | oan-miR-449a | 21/21 | Contig3432 | + | 29-49 | N/A | - | miRBase_13_0 | 11/22 | 4/42 |
20 | oan-mir-449b | Ornithorhynchus anatinus | oan-miR-449b* | 22/22 | Contig39133 | - | 62-83 | N/A | - | miRBase_13_0 | 11/22 | 4/42 |
21 | oan-mir-449b | Ornithorhynchus anatinus | oan-miR-449b | 21/21 | Contig39133 | - | 22-42 | N/A | - | miRBase_13_0 | 11/22 | 4/42 |
22 | oan-mir-449c | Ornithorhynchus anatinus | oan-miR-449c | 21/21 | Contig3432 | + | 22-42 | N/A | - | miRBase_13_0 | 11/22 | 4/42 |
23 | ptr-mir-449a | Pan troglodytes | ptr-miR-449a | 22/22 | chr5 | + | 15-36 | N/A | - | miRBase_13_0 | 11/22 | 2/42 |
24 | ptr-mir-449b | Pan troglodytes | ptr-miR-449b | 22/22 | chr5 | + | 15-36 | N/A | - | miRBase_13_0 | 11/22 | 2/42 |
25 | rno-mir-449a | Rattus norvegicus | rno-miR-449a | 22/22 | chr2 | + | 16-37 | N/A | - | miRBase_13_0 | 11/22 | 1/42 |
26 | xtr-mir-449 | Xenopus tropicalis | xtr-miR-449 | 22/22 | scaffold_715 | - | 16-37 | N/A | - | miRBase_13_0 | 11/22 | 2/42 |
Total | 26 record(s). |