- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-572 | Callithrix jacchus | ptr-miR-449a | 21/22 | Contig6061 | - | 13-34 | 20086-20169 | 0.99339 | Ortholog | 11/22 | 1/42 |
2 | calJac1-572 | Callithrix jacchus | xtr-miR-449 | 20/22 | Contig6061 | - | 14-34 | 20086-20169 | 0.992607 | Ortholog | 11/22 | 1/42 |
3 | cavPor3-418 | Cavia porcellus | mmu-miR-449c | 21/21 | scaffold_29 | + | 8-28 | 6899933-6900009 | 0.937786 | Ortholog | 11/22 | 2/42 |
4 | cavPor3-419 | Cavia porcellus | xtr-miR-449 | 20/22 | scaffold_29 | + | 14-34 | 6900573-6900655 | 0.995966 | Ortholog | 11/22 | 2/42 |
5 | cavPor3-419 | Cavia porcellus | ptr-miR-449a | 21/22 | scaffold_29 | + | 12-33 | 6900574-6900654 | 0.996469 | Ortholog | 11/22 | 2/42 |
6 | echTel1-1 | Echinops telfari | xtr-miR-449 | 20/22 | scaffold_102157 | + | 12-32 | N/A | 0.994144 | Ortholog | 11/22 | 2/42 |
7 | echTel1-2 | Echinops telfari | ptr-miR-449a | 21/22 | scaffold_102157 | + | 11-32 | N/A | 0.999738 | Ortholog | 11/22 | 2/42 |
8 | echTel1-2 | Echinops telfari | xtr-miR-449 | 20/22 | scaffold_102157 | + | 12-32 | N/A | 0.999636 | Ortholog | 11/22 | 2/42 |
9 | equCab1-271 | Equus caballus | xtr-miR-449 | 20/22 | chr21 | + | 13-33 | 12945277-12945358 | 0.99428 | Ortholog | 11/22 | 1/42 |
10 | equCab1-271 | Equus caballus | ptr-miR-449a | 21/22 | chr21 | + | 11-32 | 12945278-12945357 | 0.998041 | Ortholog | 11/22 | 1/42 |
11 | gasAcu1-510 | Gasterosteus aculeatus | xtr-miR-449 | 20/22 | chrXIII | - | 18-39 | 2241590-2241678 | 0.999373 | Ortholog | 11/22 | 1/42 |
12 | gasAcu1-510 | Gasterosteus aculeatus | hsa-miR-449a | 20/22 | chrXIII | - | 19-39 | 2241590-2241678 | 0.998744 | Ortholog | 11/22 | 1/42 |
13 | loxAfr1-47 | Loxodonta africana | ptr-miR-449a | 21/22 | scaffold_13763 | - | 13-34 | N/A | 0.999064 | Ortholog | 11/22 | 2/42 |
14 | loxAfr1-47 | Loxodonta africana | xtr-miR-449 | 20/22 | scaffold_13763 | - | 14-34 | N/A | 0.998937 | Ortholog | 11/22 | 2/42 |
15 | loxAfr1-48 | Loxodonta africana | xtr-miR-449 | 20/22 | scaffold_13763 | - | 13-33 | N/A | 0.997898 | Ortholog | 11/22 | 2/42 |
16 | loxAfr1-48 | Loxodonta africana | hsa-miR-449b | 22/22 | scaffold_13763 | - | 13-34 | N/A | 0.996428 | Ortholog | 11/22 | 2/42 |
17 | loxAfr1-48 | Loxodonta africana | hsa-miR-449a | 20/22 | scaffold_13763 | - | 14-33 | N/A | 0.998021 | Ortholog | 11/22 | 2/42 |
18 | oryCun1-427 | Oryctolagus cuniculus | hsa-miR-449b | 20/22 | scaffold_208325 | - | 15-34 | N/A | 0.998716 | Ortholog | 11/22 | 1/42 |
19 | oryCun1-427 | Oryctolagus cuniculus | xtr-miR-449 | 20/22 | scaffold_208325 | - | 15-35 | N/A | 0.999184 | Ortholog | 11/22 | 1/42 |
20 | oryCun1-427 | Oryctolagus cuniculus | ptr-miR-449a | 21/22 | scaffold_208325 | - | 14-35 | N/A | 0.999289 | Ortholog | 11/22 | 1/42 |
21 | oryLat2-401 | Oryzias latipes | xtr-miR-449 | 20/22 | chr9 | + | 13-32 | 4531395-4531475 | 0.995068 | Ortholog | 11/22 | 1/42 |
22 | otoGar1-355 | Otolemur garnettii | hsa-miR-449a | 20/22 | scaffold_82061.1-234354 | - | 50-69 | N/A | 0.869324 | Ortholog | 11/22 | 3/42 |
23 | otoGar1-356 | Otolemur garnettii | hsa-miR-449a | 20/22 | scaffold_82061.1-234354 | - | 50-69 | N/A | 0.869195 | Ortholog | 11/22 | 3/42 |
24 | otoGar1-442 | Otolemur garnettii | oan-miR-449a | 20/21 | scaffold_90784.1-250187 | - | 50-69 | N/A | 0.983121 | Ortholog | 11/22 | 3/42 |
25 | ponAbe2-630 | Pongo abelii | ptr-miR-449a | 21/22 | chr5 | - | 13-34 | 56431751-56431834 | 0.988833 | Ortholog | 11/22 | 1/42 |
26 | ponAbe2-630 | Pongo abelii | xtr-miR-449 | 20/22 | chr5 | - | 14-34 | 56431751-56431834 | 0.98731 | Ortholog | 11/22 | 1/42 |
27 | sorAra1-211 | Sorex araneus | hsa-miR-449a | 20/22 | scaffold_257145 | + | 23-42 | N/A | 0.996774 | Ortholog | 11/22 | 2/42 |
28 | sorAra1-211 | Sorex araneus | hsa-miR-449b | 22/22 | scaffold_257145 | + | 22-43 | N/A | 0.994466 | Ortholog | 11/22 | 2/42 |
29 | sorAra1-211 | Sorex araneus | xtr-miR-449 | 20/22 | scaffold_257145 | + | 22-42 | N/A | 0.997261 | Ortholog | 11/22 | 2/42 |
30 | sorAra1-212 | Sorex araneus | xtr-miR-449 | 20/22 | scaffold_257145 | + | 13-33 | N/A | 0.997188 | Ortholog | 11/22 | 2/42 |
31 | sorAra1-212 | Sorex araneus | ptr-miR-449a | 21/22 | scaffold_257145 | + | 11-32 | N/A | 0.998976 | Ortholog | 11/22 | 2/42 |
Total | 31 record(s). |